RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 MRIQ9BWK5 157 aa16.37■□□□□ 0.21
SF3B2-212ENST00000531589 TDRD3Q9H7E2 651 aaKnown RBP16.37■□□□□ 0.21
SF3B2-212ENST00000531589 CEP126Q9P2H0 1117 aa16.37■□□□□ 0.21
SF3B2-212ENST00000531589 ZNF70Q9UC06 446 aaPredicted RBP16.37■□□□□ 0.21
SF3B2-212ENST00000531589 CCDC85CA6NKD9 419 aa16.36■□□□□ 0.21
SF3B2-212ENST00000531589 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
SF3B2-212ENST00000531589 NBPF12Q5TAG4 269 aaPredicted RBP16.36■□□□□ 0.21
SF3B2-212ENST00000531589 SPRYD7Q5W111 196 aa16.36■□□□□ 0.21
SF3B2-212ENST00000531589 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
SF3B2-212ENST00000531589 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
SF3B2-212ENST00000531589 WDR66Q8TBY9 1149 aa16.36■□□□□ 0.21
SF3B2-212ENST00000531589 GNL3LQ9NVN8 582 aaKnown RBP16.36■□□□□ 0.21
SF3B2-212ENST00000531589 TMOD2Q9NZR1 351 aa16.36■□□□□ 0.21
SF3B2-212ENST00000531589 LRRFIP2Q9Y608 721 aaKnown RBP16.36■□□□□ 0.21
SF3B2-212ENST00000531589 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
SF3B2-212ENST00000531589 MANSC4A6NHS7 340 aaPredicted RBP16.35■□□□□ 0.21
SF3B2-212ENST00000531589 ALDH1A1P00352 501 aa16.35■□□□□ 0.21
SF3B2-212ENST00000531589 ZBTB48P10074 688 aaPredicted RBP16.35■□□□□ 0.21
SF3B2-212ENST00000531589 MKRN3Q13064 507 aaKnown RBP16.35■□□□□ 0.21
SF3B2-212ENST00000531589 ANKRD13AQ8IZ07 590 aa16.35■□□□□ 0.21
SF3B2-212ENST00000531589 SIL1Q9H173 461 aa16.35■□□□□ 0.21
SF3B2-212ENST00000531589 ECM29Q5VYK3 1845 aa16.35■□□□□ 0.21
SF3B2-212ENST00000531589 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
SF3B2-212ENST00000531589 MEIS3Q99687 375 aa16.34■□□□□ 0.21
SF3B2-212ENST00000531589 COPRSQ9NQ92 184 aa16.34■□□□□ 0.21
SF3B2-212ENST00000531589 CASP8AP2Q9UKL3 1982 aa16.33■□□□□ 0.21
SF3B2-212ENST00000531589 TCP10L2B9ZVM9 353 aa16.33■□□□□ 0.2
SF3B2-212ENST00000531589 USP2O75604 605 aaPredicted RBP16.33■□□□□ 0.2
SF3B2-212ENST00000531589 NOM1Q5C9Z4 860 aaKnown RBP16.33■□□□□ 0.2
SF3B2-212ENST00000531589 HHIPL2Q6UWX4 724 aa16.33■□□□□ 0.2
SF3B2-212ENST00000531589 CTU1Q7Z7A3 348 aaKnown RBP16.33■□□□□ 0.2
SF3B2-212ENST00000531589 HOOK2Q96ED9 719 aa16.33■□□□□ 0.2
SF3B2-212ENST00000531589 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
SF3B2-212ENST00000531589 FZD1Q9UP38 647 aa16.33■□□□□ 0.2
SF3B2-212ENST00000531589 AOX1Q06278 1338 aa16.33■□□□□ 0.2
SF3B2-212ENST00000531589 SEMA3EO15041 775 aa16.32■□□□□ 0.2
SF3B2-212ENST00000531589 TBC1D8O95759 1140 aa16.32■□□□□ 0.2
SF3B2-212ENST00000531589 GRIK5Q16478 980 aa16.32■□□□□ 0.2
SF3B2-212ENST00000531589 FKBP1CQ5VVH2 108 aa16.32■□□□□ 0.2
SF3B2-212ENST00000531589 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
SF3B2-212ENST00000531589 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
SF3B2-212ENST00000531589 FRAT1Q92837 279 aaPredicted RBP16.32■□□□□ 0.2
SF3B2-212ENST00000531589 WNK4Q96J92 1243 aa16.32■□□□□ 0.2
SF3B2-212ENST00000531589 CFHR5Q9BXR6 569 aa16.32■□□□□ 0.2
SF3B2-212ENST00000531589 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.32■□□□□ 0.2
SF3B2-212ENST00000531589 SSC5DA1L4H1 1573 aa16.31■□□□□ 0.2
SF3B2-212ENST00000531589 PKN2Q16513 984 aaKnown RBP16.31■□□□□ 0.2
SF3B2-212ENST00000531589 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
SF3B2-212ENST00000531589 OTUD7BQ6GQQ9 843 aa16.31■□□□□ 0.2
SF3B2-212ENST00000531589 FAM83AQ86UY5 434 aa16.31■□□□□ 0.2
SF3B2-212ENST00000531589 CLMNQ96JQ2 1002 aa16.31■□□□□ 0.2
SF3B2-212ENST00000531589 GPR25O00155 361 aa16.3■□□□□ 0.2
SF3B2-212ENST00000531589 SRGAP3O43295 1099 aa16.3■□□□□ 0.2
SF3B2-212ENST00000531589 TRIM27P14373 513 aa16.3■□□□□ 0.2
SF3B2-212ENST00000531589 HNRNPUQ00839 825 aaKnown RBP eCLIP16.3■□□□□ 0.2
SF3B2-212ENST00000531589 MTX1Q13505 466 aa16.3■□□□□ 0.2
SF3B2-212ENST00000531589 TEPSINQ96N21 525 aa16.3■□□□□ 0.2
SF3B2-212ENST00000531589 TMEM39BQ9GZU3 492 aa16.3■□□□□ 0.2
SF3B2-212ENST00000531589 DENND2AQ9ULE3 1009 aa16.3■□□□□ 0.2
SF3B2-212ENST00000531589 PA2G4Q9UQ80 394 aaKnown RBP16.3■□□□□ 0.2
SF3B2-212ENST00000531589 AKAP2Q9Y2D5 859 aa16.3■□□□□ 0.2
SF3B2-212ENST00000531589 ZBTB22O15209 634 aa16.29■□□□□ 0.2
SF3B2-212ENST00000531589 GNAI2P04899 355 aa16.29■□□□□ 0.2
SF3B2-212ENST00000531589 APOBEC3HQ6NTF7 200 aaKnown RBP16.29■□□□□ 0.2
SF3B2-212ENST00000531589 IFNL1Q8IU54 200 aa16.29■□□□□ 0.2
SF3B2-212ENST00000531589 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
SF3B2-212ENST00000531589 ZNF296Q8WUU4 475 aaPredicted RBP16.29■□□□□ 0.2
SF3B2-212ENST00000531589 BCAR3O75815 825 aa16.28■□□□□ 0.2
SF3B2-212ENST00000531589 LDHBP07195 334 aaKnown RBP16.28■□□□□ 0.2
SF3B2-212ENST00000531589 MAP3K9P80192 1104 aa16.28■□□□□ 0.2
SF3B2-212ENST00000531589 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
SF3B2-212ENST00000531589 MIER1Q8N108 512 aa16.28■□□□□ 0.2
SF3B2-212ENST00000531589 CSADQ9Y600 493 aa16.28■□□□□ 0.2
SF3B2-212ENST00000531589 SALL1Q9NSC2 1324 aa16.27■□□□□ 0.2
SF3B2-212ENST00000531589 FKTNO75072 461 aa16.27■□□□□ 0.2
SF3B2-212ENST00000531589 RGS19P49795 217 aa16.27■□□□□ 0.2
SF3B2-212ENST00000531589 DCAF15Q66K64 600 aa16.27■□□□□ 0.2
SF3B2-212ENST00000531589 CLUAP1Q96AJ1 413 aa16.27■□□□□ 0.2
SF3B2-212ENST00000531589 OPTNQ96CV9 577 aa16.27■□□□□ 0.2
SF3B2-212ENST00000531589 ELP3Q9H9T3 547 aa16.27■□□□□ 0.2
SF3B2-212ENST00000531589 PHKA1P46020 1223 aa16.26■□□□□ 0.19
SF3B2-212ENST00000531589 CACNB3P54284 484 aa16.26■□□□□ 0.19
SF3B2-212ENST00000531589 MLLT1Q03111 559 aaPredicted RBP16.26■□□□□ 0.19
SF3B2-212ENST00000531589 MVPQ14764 893 aaKnown RBP16.26■□□□□ 0.19
SF3B2-212ENST00000531589 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
SF3B2-212ENST00000531589 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.26■□□□□ 0.19
SF3B2-212ENST00000531589 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.26■□□□□ 0.19
SF3B2-212ENST00000531589 A0A1B0GUL7 405 aa16.25■□□□□ 0.19
SF3B2-212ENST00000531589 TESPA1A2RU30 521 aaPredicted RBP16.25■□□□□ 0.19
SF3B2-212ENST00000531589 PRDX5P30044 214 aa16.25■□□□□ 0.19
SF3B2-212ENST00000531589 TIMM10P62072 90 aa16.25■□□□□ 0.19
SF3B2-212ENST00000531589 VGLL4Q14135 290 aa16.25■□□□□ 0.19
SF3B2-212ENST00000531589 SPTY2D1Q68D10 685 aaPredicted RBP16.25■□□□□ 0.19
SF3B2-212ENST00000531589 CDAN1Q8IWY9 1227 aa16.25■□□□□ 0.19
SF3B2-212ENST00000531589 SLF2Q8IX21 1173 aa16.25■□□□□ 0.19
SF3B2-212ENST00000531589 FAM151AQ8WW52 585 aa16.25■□□□□ 0.19
SF3B2-212ENST00000531589 RPAP1Q9BWH6 1393 aaPredicted RBP16.25■□□□□ 0.19
SF3B2-212ENST00000531589 PDS5AQ29RF7 1337 aaKnown RBP16.24■□□□□ 0.19
SF3B2-212ENST00000531589 GTF2A2P52657 109 aa16.24■□□□□ 0.19
SF3B2-212ENST00000531589 TFCP2Q12800 502 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms