RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 APBB1O00213 710 aa17.81■□□□□ 0.44
FOXR1-202ENST00000531539 LDHBP07195 334 aaKnown RBP17.81■□□□□ 0.44
FOXR1-202ENST00000531539 RRP1P56182 461 aaKnown RBP17.81■□□□□ 0.44
FOXR1-202ENST00000531539 HDLBPQ00341 1268 aaKnown RBP17.81■□□□□ 0.44
FOXR1-202ENST00000531539 RASGRF1Q13972 1273 aa17.81■□□□□ 0.44
FOXR1-202ENST00000531539 HSP90AB4PQ58FF6 505 aa17.81■□□□□ 0.44
FOXR1-202ENST00000531539 APOBEC3FQ8IUX4 373 aaKnown RBP17.81■□□□□ 0.44
FOXR1-202ENST00000531539 JMYQ8N9B5 988 aa17.81■□□□□ 0.44
FOXR1-202ENST00000531539 TEKT1Q969V4 418 aa17.81■□□□□ 0.44
FOXR1-202ENST00000531539 MRIQ9BWK5 157 aa17.81■□□□□ 0.44
FOXR1-202ENST00000531539 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
FOXR1-202ENST00000531539 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
FOXR1-202ENST00000531539 ZNF70Q9UC06 446 aaPredicted RBP17.81■□□□□ 0.44
FOXR1-202ENST00000531539 HUNKP57058 714 aa17.8■□□□□ 0.44
FOXR1-202ENST00000531539 CCDC158Q5M9N0 1113 aa17.8■□□□□ 0.44
FOXR1-202ENST00000531539 CYP4F22Q6NT55 531 aa17.8■□□□□ 0.44
FOXR1-202ENST00000531539 DBNDD2Q9BQY9 259 aa17.8■□□□□ 0.44
FOXR1-202ENST00000531539 DEFB129Q9H1M3 183 aa17.8■□□□□ 0.44
FOXR1-202ENST00000531539 ABCF2Q9UG63 623 aa17.8■□□□□ 0.44
FOXR1-202ENST00000531539 MAST3O60307 1309 aa17.79■□□□□ 0.44
FOXR1-202ENST00000531539 WDR33Q9C0J8 1336 aaKnown RBP17.79■□□□□ 0.44
FOXR1-202ENST00000531539 PRDX5P30044 214 aa17.79■□□□□ 0.44
FOXR1-202ENST00000531539 TTLL12Q14166 644 aaPredicted RBP17.79■□□□□ 0.44
FOXR1-202ENST00000531539 TTC39AQ5SRH9 613 aa17.79■□□□□ 0.44
FOXR1-202ENST00000531539 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
FOXR1-202ENST00000531539 EAF2Q96CJ1 260 aaPredicted RBP17.79■□□□□ 0.44
FOXR1-202ENST00000531539 HMG20BQ9P0W2 317 aa17.79■□□□□ 0.44
FOXR1-202ENST00000531539 TRPM7Q96QT4 1865 aa17.78■□□□□ 0.44
FOXR1-202ENST00000531539 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
FOXR1-202ENST00000531539 NF2P35240 595 aa17.78■□□□□ 0.44
FOXR1-202ENST00000531539 PRKG1Q13976 671 aa17.78■□□□□ 0.44
FOXR1-202ENST00000531539 HHIPL2Q6UWX4 724 aa17.78■□□□□ 0.44
FOXR1-202ENST00000531539 SPATA5Q8NB90 893 aa17.78■□□□□ 0.44
FOXR1-202ENST00000531539 CAPNS2Q96L46 248 aa17.78■□□□□ 0.44
FOXR1-202ENST00000531539 SNRKQ9NRH2 765 aa17.78■□□□□ 0.44
FOXR1-202ENST00000531539 SALL1Q9NSC2 1324 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 TCP10L2B9ZVM9 353 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 ECE1P42892 770 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 DIXDC1Q155Q3 683 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 SPDYE2Q495Y8 402 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 SPTY2D1Q68D10 685 aaPredicted RBP17.77■□□□□ 0.44
FOXR1-202ENST00000531539 PI16Q6UXB8 463 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 TBC1D9Q6ZT07 1266 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 MOB2Q70IA6 237 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.44
FOXR1-202ENST00000531539 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 ZDHHC15Q96MV8 337 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 IL1RAPL2Q9NP60 686 aa17.77■□□□□ 0.44
FOXR1-202ENST00000531539 COL1A1P02452 1464 aaPredicted RBP17.76■□□□□ 0.43
FOXR1-202ENST00000531539 UBE2Q2LH0YL09 131 aa17.76■□□□□ 0.43
FOXR1-202ENST00000531539 ZBTB22O15209 634 aa17.76■□□□□ 0.43
FOXR1-202ENST00000531539 ARID4AP29374 1257 aaPredicted RBP17.76■□□□□ 0.43
FOXR1-202ENST00000531539 RASA3Q14644 834 aa17.76■□□□□ 0.43
FOXR1-202ENST00000531539 APOBEC3HQ6NTF7 200 aaKnown RBP17.76■□□□□ 0.43
FOXR1-202ENST00000531539 AACSQ86V21 672 aa17.76■□□□□ 0.43
FOXR1-202ENST00000531539 HHIPL1Q96JK4 782 aa17.76■□□□□ 0.43
FOXR1-202ENST00000531539 AOC2O75106 756 aa17.75■□□□□ 0.43
FOXR1-202ENST00000531539 RAB11FIP3O75154 756 aa17.75■□□□□ 0.43
FOXR1-202ENST00000531539 MCAMP43121 646 aa17.75■□□□□ 0.43
FOXR1-202ENST00000531539 ZNF157P51786 506 aaPredicted RBP17.75■□□□□ 0.43
FOXR1-202ENST00000531539 CACNB3P54284 484 aa17.75■□□□□ 0.43
FOXR1-202ENST00000531539 RGMBQ6NW40 437 aa17.75■□□□□ 0.43
FOXR1-202ENST00000531539 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
FOXR1-202ENST00000531539 TLR7Q9NYK1 1049 aaKnown RBP17.75■□□□□ 0.43
FOXR1-202ENST00000531539 DBNLQ9UJU6 430 aaKnown RBP17.75■□□□□ 0.43
FOXR1-202ENST00000531539 PDS5AQ29RF7 1337 aaKnown RBP17.74■□□□□ 0.43
FOXR1-202ENST00000531539 TNNI2P48788 182 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 FKBP1BP68106 108 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 TNFAIP1Q13829 316 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 SUPT20HL1Q3ZLR7 823 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 NBPF12Q5TAG4 269 aaPredicted RBP17.74■□□□□ 0.43
FOXR1-202ENST00000531539 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
FOXR1-202ENST00000531539 KIF1BPQ96EK5 621 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 USP40Q9NVE5 1235 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 RAI14Q9P0K7 980 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.74■□□□□ 0.43
FOXR1-202ENST00000531539 DAGLAQ9Y4D2 1042 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 PPP2R3BQ9Y5P8 575 aa17.74■□□□□ 0.43
FOXR1-202ENST00000531539 ARMC9Q7Z3E5 817 aa17.73■□□□□ 0.43
FOXR1-202ENST00000531539 CLASRPQ8N2M8 674 aaKnown RBP17.73■□□□□ 0.43
FOXR1-202ENST00000531539 LRP2BPQ9P2M1 347 aa17.73■□□□□ 0.43
FOXR1-202ENST00000531539 FZD1Q9UP38 647 aa17.73■□□□□ 0.43
FOXR1-202ENST00000531539 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
FOXR1-202ENST00000531539 MECOMQ03112 1051 aa17.72■□□□□ 0.43
FOXR1-202ENST00000531539 CDC42EP5Q6NZY7 148 aa17.72■□□□□ 0.43
FOXR1-202ENST00000531539 SLF2Q8IX21 1173 aa17.72■□□□□ 0.43
FOXR1-202ENST00000531539 CCDC102AQ96A19 550 aa17.72■□□□□ 0.43
FOXR1-202ENST00000531539 TMEM39BQ9GZU3 492 aa17.72■□□□□ 0.43
FOXR1-202ENST00000531539 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
FOXR1-202ENST00000531539 PPP1R12BO60237 982 aaPredicted RBP17.71■□□□□ 0.43
FOXR1-202ENST00000531539 HSPA1AP0DMV8 641 aaKnown RBP17.71■□□□□ 0.43
FOXR1-202ENST00000531539 HSPA1BP0DMV9 641 aaKnown RBP17.71■□□□□ 0.43
FOXR1-202ENST00000531539 MAP2K2P36507 400 aa17.71■□□□□ 0.43
FOXR1-202ENST00000531539 ZAP70P43403 619 aa17.71■□□□□ 0.43
FOXR1-202ENST00000531539 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
FOXR1-202ENST00000531539 PCDHB15Q9Y5E8 787 aa17.71■□□□□ 0.43
FOXR1-202ENST00000531539 LDHCP07864 332 aa17.7■□□□□ 0.42
FOXR1-202ENST00000531539 FAM163AQ96GL9 167 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms