RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 WDR63Q8IWG1 891 aa16.77■□□□□ 0.28
SSH3-207ENST00000531495 ZNF333Q96JL9 665 aa16.77■□□□□ 0.28
SSH3-207ENST00000531495 TMOD2Q9NZR1 351 aa16.77■□□□□ 0.28
SSH3-207ENST00000531495 KIAA0100Q14667 2235 aaKnown RBP16.76■□□□□ 0.27
SSH3-207ENST00000531495 SPEF2Q9C093 1822 aa16.76■□□□□ 0.27
SSH3-207ENST00000531495 CETPP11597 493 aa16.76■□□□□ 0.27
SSH3-207ENST00000531495 GYG1P46976 350 aa16.76■□□□□ 0.27
SSH3-207ENST00000531495 HDLBPQ00341 1268 aaKnown RBP16.76■□□□□ 0.27
SSH3-207ENST00000531495 CAVIN4Q5BKX8 364 aa16.76■□□□□ 0.27
SSH3-207ENST00000531495 TBC1D22AQ8WUA7 517 aa16.76■□□□□ 0.27
SSH3-207ENST00000531495 BRI3BPQ8WY22 251 aa16.76■□□□□ 0.27
SSH3-207ENST00000531495 OTUD5Q96G74 571 aa16.76■□□□□ 0.27
SSH3-207ENST00000531495 FAM84BQ96KN1 310 aaPredicted RBP16.76■□□□□ 0.27
SSH3-207ENST00000531495 AOX1Q06278 1338 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 ALDH1L1O75891 902 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 GNRH1P01148 92 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
SSH3-207ENST00000531495 VGLL4Q14135 290 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 EPHA10Q5JZY3 1008 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 TMEM39BQ9GZU3 492 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 PTCH2Q9Y6C5 1203 aa16.75■□□□□ 0.27
SSH3-207ENST00000531495 MROH5Q6ZUA9 1318 aa16.74■□□□□ 0.27
SSH3-207ENST00000531495 SLC4A10Q6U841 1118 aa16.74■□□□□ 0.27
SSH3-207ENST00000531495 ERO1BQ86YB8 467 aa16.74■□□□□ 0.27
SSH3-207ENST00000531495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.74■□□□□ 0.27
SSH3-207ENST00000531495 SRCIN1Q9C0H9 1055 aa16.74■□□□□ 0.27
SSH3-207ENST00000531495 ZCCHC17Q9NP64 241 aaKnown RBP16.74■□□□□ 0.27
SSH3-207ENST00000531495 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
SSH3-207ENST00000531495 TLR2O60603 784 aa16.73■□□□□ 0.27
SSH3-207ENST00000531495 PRMT2P55345 433 aa16.73■□□□□ 0.27
SSH3-207ENST00000531495 SNAPC2Q13487 334 aa16.73■□□□□ 0.27
SSH3-207ENST00000531495 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
SSH3-207ENST00000531495 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
SSH3-207ENST00000531495 TEKT1Q969V4 418 aa16.73■□□□□ 0.27
SSH3-207ENST00000531495 MRIQ9BWK5 157 aa16.73■□□□□ 0.27
SSH3-207ENST00000531495 SPDYE5A6NIY4 337 aa16.72■□□□□ 0.27
SSH3-207ENST00000531495 HOXD10P28358 340 aa16.72■□□□□ 0.27
SSH3-207ENST00000531495 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
SSH3-207ENST00000531495 DCAF15Q66K64 600 aa16.72■□□□□ 0.27
SSH3-207ENST00000531495 ZNF646O15015 1829 aaPredicted RBP16.72■□□□□ 0.27
SSH3-207ENST00000531495 MYCP01106 439 aaPredicted RBP16.71■□□□□ 0.27
SSH3-207ENST00000531495 LACTBP83111 547 aaPredicted RBP16.71■□□□□ 0.27
SSH3-207ENST00000531495 FBXO33Q7Z6M2 555 aa16.71■□□□□ 0.27
SSH3-207ENST00000531495 WRNIP1Q96S55 665 aa16.71■□□□□ 0.27
SSH3-207ENST00000531495 PUS3Q9BZE2 481 aaKnown RBP16.71■□□□□ 0.27
SSH3-207ENST00000531495 RIPOR2Q9Y4F9 1068 aa16.71■□□□□ 0.27
SSH3-207ENST00000531495 MAST3O60307 1309 aa16.7■□□□□ 0.26
SSH3-207ENST00000531495 CCDC184Q52MB2 194 aa16.7■□□□□ 0.26
SSH3-207ENST00000531495 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
SSH3-207ENST00000531495 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
SSH3-207ENST00000531495 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
SSH3-207ENST00000531495 CDAN1Q8IWY9 1227 aa16.7■□□□□ 0.26
SSH3-207ENST00000531495 IQSEC3Q9UPP2 1182 aaPredicted RBP16.7■□□□□ 0.26
SSH3-207ENST00000531495 SUGT1Q9Y2Z0 365 aa16.7■□□□□ 0.26
SSH3-207ENST00000531495 FXR1P51114 621 aaKnown RBP eCLIP16.69■□□□□ 0.26
SSH3-207ENST00000531495 CAP1Q01518 475 aa16.69■□□□□ 0.26
SSH3-207ENST00000531495 PPIL2Q13356 520 aa16.69■□□□□ 0.26
SSH3-207ENST00000531495 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
SSH3-207ENST00000531495 ZDHHC15Q96MV8 337 aa16.69■□□□□ 0.26
SSH3-207ENST00000531495 MRS2Q9HD23 443 aa16.69■□□□□ 0.26
SSH3-207ENST00000531495 COLQQ9Y215 455 aaPredicted RBP16.69■□□□□ 0.26
SSH3-207ENST00000531495 BTBD19C9JJ37 291 aa16.68■□□□□ 0.26
SSH3-207ENST00000531495 IRF6O14896 467 aa16.68■□□□□ 0.26
SSH3-207ENST00000531495 PPATQ06203 517 aa16.68■□□□□ 0.26
SSH3-207ENST00000531495 NKX2-3Q8TAU0 364 aa16.68■□□□□ 0.26
SSH3-207ENST00000531495 ZKSCAN4Q969J2 545 aaPredicted RBP16.68■□□□□ 0.26
SSH3-207ENST00000531495 SUCLG2Q96I99 432 aa16.68■□□□□ 0.26
SSH3-207ENST00000531495 ZNF341Q9BYN7 854 aa16.68■□□□□ 0.26
SSH3-207ENST00000531495 SNCAIPQ9Y6H5 919 aa16.68■□□□□ 0.26
SSH3-207ENST00000531495 PDE8BO95263 885 aa16.67■□□□□ 0.26
SSH3-207ENST00000531495 IFIT1P09914 478 aaKnown RBP16.67■□□□□ 0.26
SSH3-207ENST00000531495 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
SSH3-207ENST00000531495 CACNB3P54284 484 aa16.67■□□□□ 0.26
SSH3-207ENST00000531495 HHIPL2Q6UWX4 724 aa16.67■□□□□ 0.26
SSH3-207ENST00000531495 DPF3Q92784 378 aa16.67■□□□□ 0.26
SSH3-207ENST00000531495 ECM29Q5VYK3 1845 aa16.66■□□□□ 0.26
SSH3-207ENST00000531495 H0YGN5 161 aa16.66■□□□□ 0.26
SSH3-207ENST00000531495 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
SSH3-207ENST00000531495 GRIK5Q16478 980 aa16.66■□□□□ 0.26
SSH3-207ENST00000531495 RAET1EQ8TD07 263 aa16.66■□□□□ 0.26
SSH3-207ENST00000531495 NBPF7P0C2Y1 421 aaPredicted RBP16.65■□□□□ 0.26
SSH3-207ENST00000531495 PSMC4P43686 418 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 BCAMP50895 628 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 LRRC24Q50LG9 513 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 APOBEC3HQ6NTF7 200 aaKnown RBP16.65■□□□□ 0.26
SSH3-207ENST00000531495 C17orf99Q6UX52 265 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 TRIM47Q96LD4 638 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 ARHGAP39Q9C0H5 1083 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
SSH3-207ENST00000531495 BIN2Q9UBW5 565 aaPredicted RBP16.65■□□□□ 0.26
SSH3-207ENST00000531495 SRRDQ9UH36 339 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 CACNA1FO60840 1977 aa16.65■□□□□ 0.26
SSH3-207ENST00000531495 ECM2O94769 699 aaPredicted RBP16.64■□□□□ 0.25
SSH3-207ENST00000531495 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.64■□□□□ 0.25
SSH3-207ENST00000531495 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.25
SSH3-207ENST00000531495 FAM151AQ8WW52 585 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms