RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 TTLL3Q9Y4R7 772 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 DTHD1Q6ZMT9 781 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 JAKMIP2Q96AA8 810 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
LRRK1-207ENST00000531270 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 PRIMPOLQ96LW4 560 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 EBAG9O00559 213 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 NMIQ13287 307 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 GKAP1Q5VSY0 366 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 GTPBP4Q9BZE4 634 aaKnown RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 CCT6AP40227 531 aaKnown RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 TNNC1P63316 161 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 FCHSD1Q86WN1 690 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 WASLO00401 505 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 ITIH3Q06033 890 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 VAV2P52735 878 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 ZYXQ15942 572 aaKnown RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 GPIHBP1Q8IV16 184 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 PA2G4Q9UQ80 394 aaKnown RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 CTNND2Q9UQB3 1225 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 KIF3CO14782 793 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 GIPC1O14908 333 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 SDSP20132 328 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 RFC1P35251 1148 aaPredicted RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 TRPC3Q13507 836 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 SPOUT1Q5T280 376 aaKnown RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 ZCRB1Q8TBF4 217 aaKnown RBP16.44■□□□□ 0.22
LRRK1-207ENST00000531270 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
LRRK1-207ENST00000531270 CALML3P27482 149 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 LACTBP83111 547 aaPredicted RBP16.43■□□□□ 0.22
LRRK1-207ENST00000531270 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 SYT10Q6XYQ8 523 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 FAM184BQ9ULE4 1060 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 CAMSAP2Q08AD1 1489 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 DDX39AO00148 427 aaKnown RBP16.43■□□□□ 0.22
LRRK1-207ENST00000531270 EPB41P11171 864 aaKnown RBP16.43■□□□□ 0.22
LRRK1-207ENST00000531270 SARNPP82979 210 aaKnown RBP16.43■□□□□ 0.22
LRRK1-207ENST00000531270 NEDD9Q14511 834 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 ZNF174Q15697 407 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 SDCCAG8Q86SQ7 713 aaPredicted RBP16.43■□□□□ 0.22
LRRK1-207ENST00000531270 KIFAP3Q92845 792 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 TNFAIP3P21580 790 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 FNBP4Q8N3X1 1017 aaPredicted RBP16.43■□□□□ 0.22
LRRK1-207ENST00000531270 IFNKQ9P0W0 207 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.43■□□□□ 0.22
LRRK1-207ENST00000531270 TRAF5O00463 557 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 SF3A3Q12874 501 aaKnown RBP eCLIP16.43■□□□□ 0.22
LRRK1-207ENST00000531270 PRKG1Q13976 671 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 FAM200AQ8TCP9 573 aa16.43■□□□□ 0.22
LRRK1-207ENST00000531270 GPR161Q8N6U8 529 aaKnown RBP16.42■□□□□ 0.22
LRRK1-207ENST00000531270 USTQ9Y2C2 406 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 FBLN1P23142 703 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 CCDC170Q8IYT3 715 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 VWA3AA6NCI4 1184 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
LRRK1-207ENST00000531270 GSDMBQ8TAX9 411 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
LRRK1-207ENST00000531270 ZNF131P52739 623 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 WDR66Q8TBY9 1149 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 LUC7L2Q9Y383 392 aaKnown RBP16.42■□□□□ 0.22
LRRK1-207ENST00000531270 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 CASQ2O14958 399 aaPredicted RBP16.42■□□□□ 0.22
LRRK1-207ENST00000531270 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
LRRK1-207ENST00000531270 MYCLP12524 364 aaPredicted RBP16.42■□□□□ 0.22
LRRK1-207ENST00000531270 BMP2KLQ5H9B9 411 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 RSPH3Q86UC2 560 aa16.42■□□□□ 0.22
LRRK1-207ENST00000531270 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 CCDC122Q5T0U0 273 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 FYB2Q5VWT5 728 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 MEIS3Q99687 375 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
LRRK1-207ENST00000531270 GNA11P29992 359 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 DIXDC1Q155Q3 683 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 TRIM31Q9BZY9 425 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 TTC31Q49AM3 519 aaPredicted RBP16.41■□□□□ 0.22
LRRK1-207ENST00000531270 SV2BQ7L1I2 683 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 FAM76AQ8TAV0 307 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 NUF2Q9BZD4 464 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 CACYBPQ9HB71 228 aaKnown RBP16.41■□□□□ 0.22
LRRK1-207ENST00000531270 FAM114A2Q9NRY5 505 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 F13A1P00488 732 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
LRRK1-207ENST00000531270 UTP14CQ5TAP6 766 aaKnown RBP16.41■□□□□ 0.22
LRRK1-207ENST00000531270 CASKIN1Q8WXD9 1431 aa16.41■□□□□ 0.22
LRRK1-207ENST00000531270 MAN1A1P33908 653 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 PLEKHH2Q8IVE3 1493 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 NYXQ9GZU5 481 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 RABEP2Q9H5N1 569 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 PICK1Q9NRD5 415 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 STRN3Q13033 797 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 NOC4LQ9BVI4 516 aaKnown RBP16.4■□□□□ 0.22
LRRK1-207ENST00000531270 ANO3Q9BYT9 981 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms