RNA–Protein interactions for RNA: ENST00000531131.1

NXF1-208, Transcript of nuclear RNA export factor 1, human

TSL 2 BASIC

Gene NXF1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-208	ENST00000531131	AACS	Q86V21	672 aa		13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	SPATA5	Q8NB90	893 aa		13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	TEKT1	Q969V4	418 aa		13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	DBNDD2	Q9BQY9	259 aa		13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	LRRCC1	Q9C099	1032 aa		13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	DBNL	Q9UJU6	430 aa	Known RBP	13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	PCDHB15	Q9Y5E8	787 aa		13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	COL1A1	P02452	1464 aa	Predicted RBP	13.99	□□□□□ -0.17
NXF1-208	ENST00000531131	CRK	P46108	304 aa		13.98	□□□□□ -0.17
NXF1-208	ENST00000531131	USP48	Q86UV5	1035 aa		13.98	□□□□□ -0.17
NXF1-208	ENST00000531131	PRMT6	Q96LA8	375 aa	Predicted RBP	13.98	□□□□□ -0.17
NXF1-208	ENST00000531131	ZDHHC15	Q96MV8	337 aa		13.98	□□□□□ -0.17
NXF1-208	ENST00000531131	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.98	□□□□□ -0.17
NXF1-208	ENST00000531131	HMG20B	Q9P0W2	317 aa		13.98	□□□□□ -0.17
NXF1-208	ENST00000531131	APBB1	O00213	710 aa		13.97	□□□□□ -0.17
NXF1-208	ENST00000531131	TRAF5	O00463	557 aa		13.97	□□□□□ -0.17
NXF1-208	ENST00000531131	IFIT2	P09913	472 aa	Known RBP	13.97	□□□□□ -0.17
NXF1-208	ENST00000531131	MCAM	P43121	646 aa		13.97	□□□□□ -0.17
NXF1-208	ENST00000531131	HDAC1	Q13547	482 aa	Predicted RBP	13.97	□□□□□ -0.17
NXF1-208	ENST00000531131	GRIK5	Q16478	980 aa		13.97	□□□□□ -0.17
NXF1-208	ENST00000531131	SLF2	Q8IX21	1173 aa		13.97	□□□□□ -0.17
NXF1-208	ENST00000531131	IL1RAPL2	Q9NP60	686 aa		13.97	□□□□□ -0.17
NXF1-208	ENST00000531131	ASTN2	O75129	1339 aa	Predicted RBP	13.96	□□□□□ -0.17
NXF1-208	ENST00000531131	AKAP11	Q9UKA4	1901 aa		13.96	□□□□□ -0.17
NXF1-208	ENST00000531131	PRDX5	P30044	214 aa		13.96	□□□□□ -0.17
NXF1-208	ENST00000531131	TNFAIP1	Q13829	316 aa		13.96	□□□□□ -0.17
NXF1-208	ENST00000531131	ERICH6	Q7L0X2	663 aa		13.96	□□□□□ -0.17
NXF1-208	ENST00000531131	ABCF2	Q9UG63	623 aa		13.96	□□□□□ -0.17
NXF1-208	ENST00000531131	PPP2R3B	Q9Y5P8	575 aa		13.96	□□□□□ -0.17
NXF1-208	ENST00000531131	ADM5	C9JUS6	153 aa		13.95	□□□□□ -0.18
NXF1-208	ENST00000531131	CELF2	O95319	508 aa	Known RBP	13.95	□□□□□ -0.18
NXF1-208	ENST00000531131	SPDYE2	Q495Y8	402 aa		13.95	□□□□□ -0.18
NXF1-208	ENST00000531131	CST9	Q5W186	159 aa		13.95	□□□□□ -0.18
NXF1-208	ENST00000531131	FAM163A	Q96GL9	167 aa	Predicted RBP	13.95	□□□□□ -0.18
NXF1-208	ENST00000531131	TLR7	Q9NYK1	1049 aa	Known RBP	13.95	□□□□□ -0.18
NXF1-208	ENST00000531131	MYH2	Q9UKX2	1941 aa		13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	GSTO1	P78417	241 aa		13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	FKBP1C	Q5VVH2	108 aa		13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	TMED8	Q6PL24	325 aa	Predicted RBP	13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	DZIP1	Q86YF9	867 aa	Known RBP	13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	GCC1	Q96CN9	775 aa		13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	CDCA5	Q96FF9	252 aa		13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	RWDD1	Q9H446	243 aa	Predicted RBP	13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	ZNF70	Q9UC06	446 aa	Predicted RBP	13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	PCDHAC2	Q9Y5I4	1007 aa		13.94	□□□□□ -0.18
NXF1-208	ENST00000531131	LDHC	P07864	332 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	NF2	P35240	595 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	TNNI2	P48788	182 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	FKBP1B	P68106	108 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	FMR1	Q06787	632 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	PI16	Q6UXB8	463 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	C2orf69	Q8N8R5	385 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	EXOC6	Q8TAG9	804 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	HHIPL1	Q96JK4	782 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	DEFB129	Q9H1M3	183 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	TDRD3	Q9H7E2	651 aa	Known RBP	13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	TMOD2	Q9NZR1	351 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	LRP2BP	Q9P2M1	347 aa		13.93	□□□□□ -0.18
NXF1-208	ENST00000531131	CLRN2	A0PK11	232 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	MAP4K4	O95819	1239 aa	Predicted RBP	13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	CYP2E1	P05181	493 aa	Predicted RBP	13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	ZAP70	P43403	619 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	MECOM	Q03112	1051 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	TTF1	Q15361	905 aa	Predicted RBP	13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	DIXDC1	Q155Q3	683 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	JMY	Q8N9B5	988 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	ZNF408	Q9H9D4	720 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	VEZT	Q9HBM0	779 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	SNRK	Q9NRH2	765 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	RAI14	Q9P0K7	980 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	ABT1	Q9ULW3	272 aa	Known RBP	13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	DAGLA	Q9Y4D2	1042 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	TLL2	Q9Y6L7	1015 aa		13.92	□□□□□ -0.18
NXF1-208	ENST00000531131	GAK	O14976	1311 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	RASSF10	A6NK89	507 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	ATP5J	P18859	108 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	HTRA3	P83110	453 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	DEFB115	Q30KQ5	88 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	SUPT20HL1	Q3ZLR7	823 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	TBC1D9	Q6ZT07	1266 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	SAPCD2	Q86UD0	394 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	FAM83A	Q86UY5	434 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	NSUN4	Q96CB9	384 aa	Known RBP	13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	KLRG1	Q96E93	195 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	GPATCH3	Q96I76	525 aa		13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	GBA2	Q9HCG7	927 aa	Predicted RBP	13.91	□□□□□ -0.18
NXF1-208	ENST00000531131	GPR75-ASB3	A0A0A6YYF3	556 aa		13.9	□□□□□ -0.18
NXF1-208	ENST00000531131	RASA3	Q14644	834 aa		13.9	□□□□□ -0.18
NXF1-208	ENST00000531131	CNTNAP1	P78357	1384 aa		13.9	□□□□□ -0.18
NXF1-208	ENST00000531131	MROH7-TTC4	A0A0A0MT08	1334 aa		13.9	□□□□□ -0.19
NXF1-208	ENST00000531131	AOX1	Q06278	1338 aa		13.9	□□□□□ -0.19
NXF1-208	ENST00000531131	SMARCA5	O60264	1052 aa	Predicted RBP	13.89	□□□□□ -0.19
NXF1-208	ENST00000531131	ECE1	P42892	770 aa		13.89	□□□□□ -0.19
NXF1-208	ENST00000531131	MAP3K12	Q12852	859 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms