RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CEP57Q86XR8 500 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 UNC5CLQ8IV45 518 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 RPUSD2Q8IZ73 545 aaKnown RBP8.9□□□□□ -0.99
PTPRK-219ENST00000531050 MAGEC3Q8TD91 643 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 RIN2Q8WYP3 895 aaPredicted RBP8.9□□□□□ -0.99
PTPRK-219ENST00000531050 SAAL1Q96ER3 474 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 GBP3Q9H0R5 595 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.9□□□□□ -0.99
PTPRK-219ENST00000531050 KIAA0232Q92628 1395 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 GOLGA8FQ08AF8 430 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 GOLGA8DPQ0D2H9 430 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 CCDC40Q4G0X9 1142 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 MYSM1Q5VVJ2 828 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 NECAB1Q8N987 351 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 RILPL2Q969X0 211 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 NAT10Q9H0A0 1025 aaKnown RBP8.89□□□□□ -0.99
PTPRK-219ENST00000531050 VCPKMTQ9H867 229 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 HOMER3Q9NSC5 361 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 MAFGO15525 162 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 ZNF202O95125 648 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 RHOXF2BP0C7M4 288 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.89□□□□□ -0.99
PTPRK-219ENST00000531050 RHOXF2Q9BQY4 288 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 SLC40A1Q9NP59 571 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 SH2B1Q9NRF2 756 aaPredicted RBP8.89□□□□□ -0.99
PTPRK-219ENST00000531050 RTEL1Q9NZ71 1219 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 HPCAL4Q9UM19 191 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 ZFYVE9O95405 1425 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 TMEM131LA2VDJ0 1609 aa8.89□□□□□ -0.99
PTPRK-219ENST00000531050 GOLGA6L9A6NEM1 432 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 KIAA0754O94854 1291 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 ECEL1O95672 775 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 EZRP15311 586 aaKnown RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 NAP1L1P55209 391 aaKnown RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 PPFIA1Q13136 1202 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 SNCBQ16143 134 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 ME3Q16798 604 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 KIF4BQ2VIQ3 1234 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 FAM76AQ8TAV0 307 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 CCDC12Q8WUD4 166 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 FBXW7Q969H0 707 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 ZSCAN31Q96LW9 406 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 PUS7Q96PZ0 661 aaKnown RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 GOLPH3LQ9H4A5 285 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 ZNF232Q9UNY5 417 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 CLTCQ00610 1675 aaKnown RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 NSD2O96028 1365 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 ARHGAP6O43182 974 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 PPP1R12BO60237 982 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 GIGYF1O75420 1035 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 RTN3O95197 1032 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 MAGEA8P43361 318 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 PLCB4Q15147 1175 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 NUTM2DQ5VT03 806 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 TOGARAM2Q6ZUX3 1019 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 B4GALNT4Q76KP1 1039 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 CRACR2AQ9BSW2 395 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 CENPHQ9H3R5 247 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 CHCHD3Q9NX63 227 aaKnown RBP8.88□□□□□ -0.99
PTPRK-219ENST00000531050 CDC23Q9UJX2 597 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 PCDHGA4Q9Y5G9 962 aa8.88□□□□□ -0.99
PTPRK-219ENST00000531050 ELL2O00472 640 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 ARHGAP25P42331 645 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 GNGT1P63211 74 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 THEMIS2Q5TEJ8 643 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 YTHDF3Q7Z739 585 aaKnown RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 KIAA1328Q86T90 577 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 NCAPG2Q86XI2 1143 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 PARP9Q8IXQ6 854 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 CCDC13Q8IYE1 715 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 CAPS2Q9BXY5 557 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 LSG1Q9H089 658 aaKnown RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 SLC39A2Q9NP94 309 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 TPCN1Q9ULQ1 816 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 ANKRD26Q9UPS8 1709 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 COL3A1P02461 1466 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 CDK12Q9NYV4 1490 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 AGPSO00116 658 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 RPSAP08865 295 aaKnown RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 PYGBP11216 843 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 GBP2P32456 591 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 GGCXP38435 758 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 PDIA5Q14554 519 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 NCAPHQ15003 741 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 E2F5Q15329 346 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 WDR93Q6P2C0 686 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 FAM163AQ96GL9 167 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 BPIFA3Q9BQP9 254 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 BATF3Q9NR55 127 aa8.87□□□□□ -0.99
PTPRK-219ENST00000531050 TPX2Q9ULW0 747 aaKnown RBP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPRK-219ENST00000531050 PTPRMP28827 1452 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 H7C1W4 665 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 ZEB2O60315 1214 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 TFRCP02786 760 aaKnown RBP8.86□□□□□ -0.99
PTPRK-219ENST00000531050 PDCP20941 246 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 ABCD1P33897 745 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 TUBB4BP68371 445 aa8.86□□□□□ -0.99
PTPRK-219ENST00000531050 FANCCQ00597 558 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms