RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 C22orf23Q9BZE7 217 aa11.91□□□□□ -0.5
CTNND1-228ENST00000531007 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.91□□□□□ -0.52e-8■■■■■ 26.9
CTNND1-228ENST00000531007 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
CTNND1-228ENST00000531007 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 A0A1B0GUL6 1792 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 ARHGAP33O14559 1287 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 TAF5LO75529 589 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 MCCP23508 829 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 MFAP1P55081 439 aaKnown RBP11.9□□□□□ -0.5
CTNND1-228ENST00000531007 CC2D2BQ6DHV5 1058 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 KIAA1211Q6ZU35 1233 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 CNKSR1Q969H4 720 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 MTFR1LQ9H019 292 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 ATP6V0A2Q9Y487 856 aa11.9□□□□□ -0.5
CTNND1-228ENST00000531007 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 SGSM2O43147 1006 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 POLD1P28340 1107 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 ADORA1P30542 326 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 MSL1Q68DK7 614 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 VPS37DQ86XT2 251 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 CCDC24Q8N4L8 307 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
CTNND1-228ENST00000531007 DNAJC2Q99543 621 aaKnown RBP11.89□□□□□ -0.51
CTNND1-228ENST00000531007 HELLSQ9NRZ9 838 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 DENND2AQ9ULE3 1009 aa11.89□□□□□ -0.51
CTNND1-228ENST00000531007 C10orf71Q711Q0 1435 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 GOLIM4O00461 696 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 DPYSL4O14531 572 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 PPEF1O14829 653 aaPredicted RBP11.88□□□□□ -0.51
CTNND1-228ENST00000531007 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
CTNND1-228ENST00000531007 FOSBP53539 338 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 ANAPC15P60006 121 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 FKBP4Q02790 459 aaKnown RBP eCLIP11.88□□□□□ -0.51
CTNND1-228ENST00000531007 FBXO33Q7Z6M2 555 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 C2CD5Q86YS7 1000 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 SPATA5Q8NB90 893 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 LRRC37AA6NMS7 1700 aa11.88□□□□□ -0.51
CTNND1-228ENST00000531007 MAP4K4O95819 1239 aaPredicted RBP11.87□□□□□ -0.51
CTNND1-228ENST00000531007 MCAMP43121 646 aa11.87□□□□□ -0.51
CTNND1-228ENST00000531007 PHKA1P46020 1223 aa11.87□□□□□ -0.51
CTNND1-228ENST00000531007 E2F4Q16254 413 aa11.87□□□□□ -0.51
CTNND1-228ENST00000531007 USP26Q9BXU7 913 aa11.87□□□□□ -0.51
CTNND1-228ENST00000531007 RNF113AO15541 343 aaKnown RBP11.86□□□□□ -0.51
CTNND1-228ENST00000531007 PTGER2P43116 358 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 ZAP70P43403 619 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 TGFB2P61812 414 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 MAP3K12Q12852 859 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 UBE3CQ15386 1083 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 MCMDC2Q4G0Z9 681 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 CWC27Q6UX04 472 aaKnown RBP11.86□□□□□ -0.51
CTNND1-228ENST00000531007 ZNF804AQ7Z570 1209 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 ZGPATQ8N5A5 531 aaKnown RBP11.86□□□□□ -0.51
CTNND1-228ENST00000531007 IL17RAQ96F46 866 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
CTNND1-228ENST00000531007 HMG20BQ9P0W2 317 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
CTNND1-228ENST00000531007 MED23Q9ULK4 1368 aa11.86□□□□□ -0.51
CTNND1-228ENST00000531007 COL4A1P02462 1669 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 DUOX1Q9NRD9 1551 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 BCAMP50895 628 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 SOGA3Q5TF21 947 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 MPNDQ8N594 471 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 EYA3Q99504 573 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
CTNND1-228ENST00000531007 SPON1Q9HCB6 807 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 ANO2Q9NQ90 1003 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 TAF1P21675 1872 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 SALL1Q9NSC2 1324 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 IRS2Q9Y4H2 1338 aa11.85□□□□□ -0.51
CTNND1-228ENST00000531007 AKAP11Q9UKA4 1901 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 ZBTB7AO95365 584 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 CYP2E1P05181 493 aaPredicted RBP11.84□□□□□ -0.51
CTNND1-228ENST00000531007 GPSM2P81274 684 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 NMIQ13287 307 aaPredicted RBP11.84□□□□□ -0.51
CTNND1-228ENST00000531007 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 SPTY2D1Q68D10 685 aaPredicted RBP11.84□□□□□ -0.51
CTNND1-228ENST00000531007 SUPT20HQ8NEM7 779 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 WDR66Q8TBY9 1149 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 APPBP2Q92624 585 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 ZNF622Q969S3 477 aaKnown RBP eCLIP11.84□□□□□ -0.51
CTNND1-228ENST00000531007 VPS33BQ9H267 617 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
CTNND1-228ENST00000531007 COL11A2P13942 1736 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-228ENST00000531007 DLEC1Q9Y238 1755 aa11.83□□□□□ -0.52
CTNND1-228ENST00000531007 FRAT2O75474 233 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-228ENST00000531007 UFL1O94874 794 aa11.83□□□□□ -0.52
CTNND1-228ENST00000531007 GYG1P46976 350 aa11.83□□□□□ -0.52
CTNND1-228ENST00000531007 PLCB2Q00722 1185 aa11.83□□□□□ -0.52
CTNND1-228ENST00000531007 SCARF1Q14162 830 aa11.83□□□□□ -0.52
CTNND1-228ENST00000531007 BECN1Q14457 450 aa11.83□□□□□ -0.52
CTNND1-228ENST00000531007 RABEP1Q15276 862 aa11.83□□□□□ -0.52
CTNND1-228ENST00000531007 RNF20Q5VTR2 975 aa11.83□□□□□ -0.52
CTNND1-228ENST00000531007 DPP8Q6V1X1 898 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms