RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 WDR66Q8TBY9 1149 aa23.09■■□□□ 1.29
GMDS-208ENST00000530927 TDRD3Q9H7E2 651 aaKnown RBP23.09■■□□□ 1.29
GMDS-208ENST00000530927 VEZTQ9HBM0 779 aa23.09■■□□□ 1.29
GMDS-208ENST00000530927 SERPINA10Q9UK55 444 aa23.09■■□□□ 1.29
GMDS-208ENST00000530927 RPAP2Q8IXW5 612 aaPredicted RBP23.08■■□□□ 1.29
GMDS-208ENST00000530927 JMYQ8N9B5 988 aa23.08■■□□□ 1.29
GMDS-208ENST00000530927 DENND2AQ9ULE3 1009 aa23.08■■□□□ 1.29
GMDS-208ENST00000530927 DIXDC1Q155Q3 683 aa23.08■■□□□ 1.28
GMDS-208ENST00000530927 GORABQ5T7V8 394 aa23.08■■□□□ 1.28
GMDS-208ENST00000530927 EAF2Q96CJ1 260 aaPredicted RBP23.08■■□□□ 1.28
GMDS-208ENST00000530927 CCDC8Q9H0W5 538 aaPredicted RBP23.08■■□□□ 1.28
GMDS-208ENST00000530927 BCL11AQ9H165 835 aa23.08■■□□□ 1.28
GMDS-208ENST00000530927 GBA2Q9HCG7 927 aaPredicted RBP23.08■■□□□ 1.28
GMDS-208ENST00000530927 FZD1Q9UP38 647 aa23.08■■□□□ 1.28
GMDS-208ENST00000530927 CACNB3P54284 484 aa23.07■■□□□ 1.28
GMDS-208ENST00000530927 APOBEC3FQ8IUX4 373 aaKnown RBP23.07■■□□□ 1.28
GMDS-208ENST00000530927 IL1RAPL2Q9NP60 686 aa23.07■■□□□ 1.28
GMDS-208ENST00000530927 GPR108Q9NPR9 543 aa23.07■■□□□ 1.28
GMDS-208ENST00000530927 HMG20BQ9P0W2 317 aa23.07■■□□□ 1.28
GMDS-208ENST00000530927 ZNF70Q9UC06 446 aaPredicted RBP23.07■■□□□ 1.28
GMDS-208ENST00000530927 SEMA3EO15041 775 aa23.06■■□□□ 1.28
GMDS-208ENST00000530927 MCAMP43121 646 aa23.06■■□□□ 1.28
GMDS-208ENST00000530927 SPDYE2Q495Y8 402 aa23.06■■□□□ 1.28
GMDS-208ENST00000530927 TEKT1Q969V4 418 aa23.06■■□□□ 1.28
GMDS-208ENST00000530927 DEFB129Q9H1M3 183 aa23.06■■□□□ 1.28
GMDS-208ENST00000530927 DBNLQ9UJU6 430 aaKnown RBP23.06■■□□□ 1.28
GMDS-208ENST00000530927 HUNKP57058 714 aa23.05■■□□□ 1.28
GMDS-208ENST00000530927 TBC1D9Q6ZT07 1266 aa23.05■■□□□ 1.28
GMDS-208ENST00000530927 CDAN1Q8IWY9 1227 aa23.05■■□□□ 1.28
GMDS-208ENST00000530927 CRBNQ96SW2 442 aa23.05■■□□□ 1.28
GMDS-208ENST00000530927 SNRKQ9NRH2 765 aa23.05■■□□□ 1.28
GMDS-208ENST00000530927 SSC5DA1L4H1 1573 aa23.04■■□□□ 1.28
GMDS-208ENST00000530927 WDR33Q9C0J8 1336 aaKnown RBP23.04■■□□□ 1.28
GMDS-208ENST00000530927 SALL1Q9NSC2 1324 aa23.04■■□□□ 1.28
GMDS-208ENST00000530927 MYO1BO43795 1136 aa23.04■■□□□ 1.28
GMDS-208ENST00000530927 LDHBP07195 334 aaKnown RBP23.04■■□□□ 1.28
GMDS-208ENST00000530927 ARID4AP29374 1257 aaPredicted RBP23.04■■□□□ 1.28
GMDS-208ENST00000530927 PRKG1Q13976 671 aa23.04■■□□□ 1.28
GMDS-208ENST00000530927 APOBEC3HQ6NTF7 200 aaKnown RBP23.04■■□□□ 1.28
GMDS-208ENST00000530927 CAPNS2Q96L46 248 aa23.04■■□□□ 1.28
GMDS-208ENST00000530927 ABCF2Q9UG63 623 aa23.04■■□□□ 1.28
GMDS-208ENST00000530927 SUGT1Q9Y2Z0 365 aa23.04■■□□□ 1.28
GMDS-208ENST00000530927 TCP10L2B9ZVM9 353 aa23.03■■□□□ 1.28
GMDS-208ENST00000530927 AOC2O75106 756 aa23.03■■□□□ 1.28
GMDS-208ENST00000530927 C2orf69Q8N8R5 385 aa23.03■■□□□ 1.28
GMDS-208ENST00000530927 SPATA5Q8NB90 893 aa23.03■■□□□ 1.28
GMDS-208ENST00000530927 RHPN1Q8TCX5 695 aa23.03■■□□□ 1.28
GMDS-208ENST00000530927 ZDHHC15Q96MV8 337 aa23.03■■□□□ 1.28
GMDS-208ENST00000530927 CHMP4BQ9H444 224 aaKnown RBP23.03■■□□□ 1.28
GMDS-208ENST00000530927 HMMRO75330 724 aa23.02■■□□□ 1.28
GMDS-208ENST00000530927 HDLBPQ00341 1268 aaKnown RBP23.02■■□□□ 1.28
GMDS-208ENST00000530927 TTC39AQ5SRH9 613 aa23.02■■□□□ 1.28
GMDS-208ENST00000530927 AACSQ86V21 672 aa23.02■■□□□ 1.28
GMDS-208ENST00000530927 DAGLAQ9Y4D2 1042 aa23.02■■□□□ 1.28
GMDS-208ENST00000530927 RASA3Q14644 834 aa23.01■■□□□ 1.27
GMDS-208ENST00000530927 ZNF384Q8TF68 577 aa23.01■■□□□ 1.27
GMDS-208ENST00000530927 PCDHB15Q9Y5E8 787 aa23.01■■□□□ 1.27
GMDS-208ENST00000530927 PAPPA2Q9BXP8 1791 aa23.01■■□□□ 1.27
GMDS-208ENST00000530927 AKAP11Q9UKA4 1901 aa23.01■■□□□ 1.27
GMDS-208ENST00000530927 MAST3O60307 1309 aa23.01■■□□□ 1.27
GMDS-208ENST00000530927 PDS5AQ29RF7 1337 aaKnown RBP23.01■■□□□ 1.27
GMDS-208ENST00000530927 UBE2Q2LH0YL09 131 aa23■■□□□ 1.27
GMDS-208ENST00000530927 ZBTB22O15209 634 aa23■■□□□ 1.27
GMDS-208ENST00000530927 NBPF12Q5TAG4 269 aaPredicted RBP23■■□□□ 1.27
GMDS-208ENST00000530927 ERC1Q8IUD2 1116 aa23■■□□□ 1.27
GMDS-208ENST00000530927 ZIC5Q96T25 663 aa23■■□□□ 1.27
GMDS-208ENST00000530927 NDUFB9Q9Y6M9 179 aa23■■□□□ 1.27
GMDS-208ENST00000530927 HHIPL2Q6UWX4 724 aa22.99■■□□□ 1.27
GMDS-208ENST00000530927 MYH2Q9UKX2 1941 aa22.99■■□□□ 1.27
GMDS-208ENST00000530927 UQCRFS1P1P0C7P4 283 aa22.99■■□□□ 1.27
GMDS-208ENST00000530927 TTLL12Q14166 644 aaPredicted RBP22.99■■□□□ 1.27
GMDS-208ENST00000530927 CCDC158Q5M9N0 1113 aa22.99■■□□□ 1.27
GMDS-208ENST00000530927 MRIQ9BWK5 157 aa22.99■■□□□ 1.27
GMDS-208ENST00000530927 TMEM39BQ9GZU3 492 aa22.99■■□□□ 1.27
GMDS-208ENST00000530927 THSD7BQ9C0I4 1608 aa22.98■■□□□ 1.27
GMDS-208ENST00000530927 HSPA1AP0DMV8 641 aaKnown RBP22.98■■□□□ 1.27
GMDS-208ENST00000530927 HSPA1BP0DMV9 641 aaKnown RBP22.98■■□□□ 1.27
GMDS-208ENST00000530927 HSP90AB4PQ58FF6 505 aa22.98■■□□□ 1.27
GMDS-208ENST00000530927 DZIP1Q86YF9 867 aaKnown RBP22.98■■□□□ 1.27
GMDS-208ENST00000530927 KIF1BPQ96EK5 621 aa22.98■■□□□ 1.27
GMDS-208ENST00000530927 MYO5AQ9Y4I1 1855 aaKnown RBP22.97■■□□□ 1.27
GMDS-208ENST00000530927 SMARCA5O60264 1052 aaPredicted RBP22.97■■□□□ 1.27
GMDS-208ENST00000530927 ZAP70P43403 619 aa22.97■■□□□ 1.27
GMDS-208ENST00000530927 MECOMQ03112 1051 aa22.97■■□□□ 1.27
GMDS-208ENST00000530927 RGMBQ6NW40 437 aa22.97■■□□□ 1.27
GMDS-208ENST00000530927 CDC42EP5Q6NZY7 148 aa22.97■■□□□ 1.27
GMDS-208ENST00000530927 ZGPATQ8N5A5 531 aaKnown RBP22.97■■□□□ 1.27
GMDS-208ENST00000530927 HHIPL1Q96JK4 782 aa22.97■■□□□ 1.27
GMDS-208ENST00000530927 TEPSINQ96N21 525 aa22.97■■□□□ 1.27
GMDS-208ENST00000530927 FAM155AB1AL88 458 aaPredicted RBP22.96■■□□□ 1.27
GMDS-208ENST00000530927 CYP2E1P05181 493 aaPredicted RBP22.96■■□□□ 1.27
GMDS-208ENST00000530927 ZNF157P51786 506 aaPredicted RBP22.96■■□□□ 1.27
GMDS-208ENST00000530927 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
GMDS-208ENST00000530927 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.96■■□□□ 1.27
GMDS-208ENST00000530927 NF2P35240 595 aa22.95■■□□□ 1.26
GMDS-208ENST00000530927 ECE1P42892 770 aa22.95■■□□□ 1.26
GMDS-208ENST00000530927 NFIAQ12857 509 aa22.95■■□□□ 1.26
GMDS-208ENST00000530927 PIH1D3Q9NQM4 214 aaKnown RBP22.95■■□□□ 1.26
GMDS-208ENST00000530927 PPP2R3BQ9Y5P8 575 aa22.95■■□□□ 1.26
GMDS-208ENST00000530927 GAKO14976 1311 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms