RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 ANKRD2Q9GZV1 360 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 R3HDMLQ9H3Y0 253 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 PPP4R2Q9NY27 417 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 ANKIB1Q9P2G1 1089 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 AKAP2Q9Y2D5 859 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 PCDHAC2Q9Y5I4 1007 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 PTPRFP10586 1907 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 COL1A1P02452 1464 aaPredicted RBP5.89□□□□□ -1.47
SSBP3-213ENST00000530618 G3V3G9 751 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 UBE2Q2LH0YL09 131 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 TRPA1O75762 1119 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 CIAO1O76071 339 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 SASH1O94885 1247 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 IL15P40933 162 aaPredicted RBP5.88□□□□□ -1.47
SSBP3-213ENST00000530618 FKBP1BP68106 108 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 IRX6P78412 446 aaPredicted RBP5.88□□□□□ -1.47
SSBP3-213ENST00000530618 MLLT1Q03111 559 aaPredicted RBP5.88□□□□□ -1.47
SSBP3-213ENST00000530618 HDAC1Q13547 482 aaPredicted RBP5.88□□□□□ -1.47
SSBP3-213ENST00000530618 RABL6Q3YEC7 729 aaPredicted RBP5.88□□□□□ -1.47
SSBP3-213ENST00000530618 METTL24Q5JXM2 366 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 LDLRAD1Q5T700 205 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 DCAF8Q5TAQ9 597 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 STRIP1Q5VSL9 837 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 CEP85Q6P2H3 762 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 LDHAL6AQ6ZMR3 332 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 C15orf52Q6ZUT6 534 aaKnown RBP5.88□□□□□ -1.47
SSBP3-213ENST00000530618 CENPQQ7L2Z9 268 aaPredicted RBP5.88□□□□□ -1.47
SSBP3-213ENST00000530618 SULF1Q8IWU6 871 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 CLASRPQ8N2M8 674 aaKnown RBP5.88□□□□□ -1.47
SSBP3-213ENST00000530618 C2orf69Q8N8R5 385 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 EXOC6Q8TAG9 804 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 CCDC102AQ96A19 550 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 KIF1BPQ96EK5 621 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 KAZALD1Q96I82 304 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 BEGAINQ9BUH8 593 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 CFHR5Q9BXR6 569 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 CEP126Q9P2H0 1117 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 FZD1Q9UP38 647 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 MROH5Q6ZUA9 1318 aa5.88□□□□□ -1.47
SSBP3-213ENST00000530618 SURF6O75683 361 aaKnown RBP5.87□□□□□ -1.47
SSBP3-213ENST00000530618 IFIT1P09914 478 aaKnown RBP5.87□□□□□ -1.47
SSBP3-213ENST00000530618 SLC5A1P13866 664 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 TM4SF4P48230 202 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 PTPN12Q05209 780 aaKnown RBP5.87□□□□□ -1.47
SSBP3-213ENST00000530618 NOM1Q5C9Z4 860 aaKnown RBP5.87□□□□□ -1.47
SSBP3-213ENST00000530618 GORABQ5T7V8 394 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 VPS37DQ86XT2 251 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 MTMR14Q8NCE2 650 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 LRRCC1Q9C099 1032 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 COA1Q9GZY4 146 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 C1orf115Q9H7X2 142 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 LEMD3Q9Y2U8 911 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 ZNF804BA4D1E1 1349 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 PHIPQ8WWQ0 1821 aa5.87□□□□□ -1.47
SSBP3-213ENST00000530618 TRIOBPQ9H2D6 2365 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 MGAMO43451 1857 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 MYO3BQ8WXR4 1341 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 EYA2O00167 538 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 EIF5BO60841 1220 aaKnown RBP5.86□□□□□ -1.47
SSBP3-213ENST00000530618 IFIT2P09913 472 aaKnown RBP5.86□□□□□ -1.47
SSBP3-213ENST00000530618 IL1R1P14778 569 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 GJA5P36382 358 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 SOX10P56693 466 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 CHRNDQ07001 517 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 PUM3Q15397 648 aaKnown RBP5.86□□□□□ -1.47
SSBP3-213ENST00000530618 GRIK5Q16478 980 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 MAP3K11Q16584 847 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 CAVIN4Q5BKX8 364 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 CTU1Q7Z7A3 348 aaKnown RBP5.86□□□□□ -1.47
SSBP3-213ENST00000530618 SSH3Q8TE77 659 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 ZNF296Q8WUU4 475 aaPredicted RBP5.86□□□□□ -1.47
SSBP3-213ENST00000530618 CD209Q9NNX6 404 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 COPRSQ9NQ92 184 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 GNL3LQ9NVN8 582 aaKnown RBP5.86□□□□□ -1.47
SSBP3-213ENST00000530618 HPS5Q9UPZ3 1129 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 TNNQ9UQP3 1299 aa5.86□□□□□ -1.47
SSBP3-213ENST00000530618 DOCK2Q92608 1830 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 FAM205AQ6ZU69 1335 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 IGF2BP3O00425 579 aaKnown RBP eCLIP5.85□□□□□ -1.47
SSBP3-213ENST00000530618 ERC2O15083 957 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 FRAT2O75474 233 aaPredicted RBP5.85□□□□□ -1.47
SSBP3-213ENST00000530618 TAF5LO75529 589 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 TBC1D8O95759 1140 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 GTF2IP78347 998 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 POLA2Q14181 598 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 LRRFIP1Q32MZ4 808 aaKnown RBP5.85□□□□□ -1.47
SSBP3-213ENST00000530618 CCDC158Q5M9N0 1113 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 SPRYD7Q5W111 196 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 TTLL5Q6EMB2 1281 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 KIAA0825Q8IV33 1275 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 HELBQ8NG08 1087 aaPredicted RBP5.85□□□□□ -1.47
SSBP3-213ENST00000530618 ZNF594Q96JF6 807 aaPredicted RBP5.85□□□□□ -1.47
SSBP3-213ENST00000530618 CLMNQ96JQ2 1002 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 PRMT6Q96LA8 375 aaPredicted RBP5.85□□□□□ -1.47
SSBP3-213ENST00000530618 TEPSINQ96N21 525 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 SIL1Q9H173 461 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 NOP58Q9Y2X3 529 aaKnown RBP5.85□□□□□ -1.47
SSBP3-213ENST00000530618 DOCK3Q8IZD9 2030 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 CDK5RAP2Q96SN8 1893 aa5.85□□□□□ -1.47
SSBP3-213ENST00000530618 ALPK3Q96L96 1907 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms