RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 EIF6P56537 245 aaKnown RBP10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 TNIP1Q15025 636 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 DACT2Q5SW24 774 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 CIAPIN1Q6FI81 312 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 CERS5Q8N5B7 392 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MIGA1Q8NAN2 632 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 OSBP2Q969R2 916 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 AIDAQ96BJ3 306 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 NOL10Q9BSC4 688 aaKnown RBP10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 PUS7LQ9H0K6 701 aaKnown RBP10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 TTF2Q9UNY4 1162 aaKnown RBP10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 RAD50Q92878 1312 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 LTBP1Q14766 1721 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 A0A1B0GUL6 1792 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MAGEB6P1A0A0J9YX57 407 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 PSMD14O00487 310 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MBD4O95243 580 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 PRELPP51888 382 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 FKBP1AP62942 108 aaKnown RBP10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 CXCL9Q07325 125 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 DIXDC1Q155Q3 683 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 IL25Q9H293 177 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ARMT1Q9H993 441 aa10.21□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MAST3O60307 1309 aa10.21□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 CCDC171Q6TFL3 1326 aa10.21□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 CACNA1SQ13698 1873 aa10.21□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 GPAA1O43292 621 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 BAG3O95817 575 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 APPP05067 770 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 VIL1P09327 827 aaKnown RBP10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 MCCP23508 829 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 SCNN1DP51172 638 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 RBM5P52756 815 aaKnown RBP eCLIP10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 DYNLL1P63167 89 aaKnown RBP10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 TMED8Q6PL24 325 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 ADGRA1Q86SQ6 560 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 ZNF589Q86UQ0 364 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 ZNF384Q8TF68 577 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 USP26Q9BXU7 913 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 C22orf23Q9BZE7 217 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 RNF181Q9P0P0 153 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 ZBTB12Q9Y330 459 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 GJA3Q9Y6H8 435 aa10.2□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 MROH7-TTC4A0A0A0MT08 1334 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 MYO3BQ8WXR4 1341 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 DCAF8L1A6NGE4 600 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 FZD9O00144 591 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 PTH1RQ03431 593 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 C9orf131Q5VYM1 1079 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 LCORLQ8N3X6 602 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 OGFOD1Q8N543 542 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 TEKT1Q969V4 418 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 STRBPQ96SI9 672 aaKnown RBP10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 LSG1Q9H089 658 aaKnown RBP10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 AATFQ9NY61 560 aaKnown RBP eCLIP10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 HDAC9Q9UKV0 1011 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 SLC4A4Q9Y6R1 1079 aa10.19□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 HSPD1P10809 573 aaKnown RBP10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 GNAT2P19087 354 aa10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 BTDP43251 543 aa10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 CRKP46108 304 aa10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 VPS53Q5VIR6 699 aa10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 AGBL3Q8NEM8 1001 aa10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 FAM163AQ96GL9 167 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 CRNKL1Q9BZJ0 848 aaKnown RBP10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 NACAP1Q9BZK3 213 aa10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 GPR75-ASB3A0A0A6YYF3 556 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 PATL2C9JE40 543 aaKnown RBP10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 PRKAB2O43741 272 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 PLCG2P16885 1265 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 PPP4CP60510 307 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 HDLBPQ00341 1268 aaKnown RBP10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 CFAP100Q494V2 611 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 HHIPL2Q6UWX4 724 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 SH3RF3Q8TEJ3 882 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 MAP4K1Q92918 833 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 DDRGK1Q96HY6 314 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 RIOK1Q9BRS2 568 aaKnown RBP10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 DSCC1Q9BVC3 393 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 MRIQ9BWK5 157 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 TSHZ2Q9NRE2 1034 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 USP40Q9NVE5 1235 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 CTNNA3Q9UI47 895 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 SERPINA10Q9UK55 444 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 DAGLAQ9Y4D2 1042 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 RBM8AQ9Y5S9 174 aaKnown RBP10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 COL4A5P29400 1685 aa10.17□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 GAKO14976 1311 aa10.16□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 ZNF541Q9H0D2 1346 aa10.16□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 EPB41L2O43491 1005 aaKnown RBP10.16□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 RPS12P25398 132 aaKnown RBP10.16□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 USP5P45974 858 aa10.16□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 GMPSP49915 693 aaPredicted RBP10.16□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 DLGAP5Q15398 846 aa10.16□□□□□ -0.78
NEDD8-MDP1-201ENST00000530579 CERS3Q8IU89 383 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms