RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	ANKRD44	Q8N8A2	993 aa		19.59	■□□□□ 0.73
TM9SF1-209	ENST00000530468		E9PSI1	815 aa		19.58	■□□□□ 0.72
TM9SF1-209	ENST00000530468	FRAT2	O75474	233 aa	Predicted RBP	19.58	■□□□□ 0.72
TM9SF1-209	ENST00000530468	LRRC24	Q50LG9	513 aa		19.58	■□□□□ 0.72
TM9SF1-209	ENST00000530468	TESPA1	A2RU30	521 aa	Predicted RBP	19.57	■□□□□ 0.72
TM9SF1-209	ENST00000530468	PDE8B	O95263	885 aa		19.57	■□□□□ 0.72
TM9SF1-209	ENST00000530468	GJA5	P36382	358 aa		19.57	■□□□□ 0.72
TM9SF1-209	ENST00000530468	VGLL2	Q8N8G2	317 aa		19.57	■□□□□ 0.72
TM9SF1-209	ENST00000530468	TEPSIN	Q96N21	525 aa		19.57	■□□□□ 0.72
TM9SF1-209	ENST00000530468	KIF16B	Q96L93	1317 aa		19.56	■□□□□ 0.72
TM9SF1-209	ENST00000530468	TCP10L2	B9ZVM9	353 aa		19.56	■□□□□ 0.72
TM9SF1-209	ENST00000530468	CHAF1A	Q13111	956 aa	Predicted RBP	19.56	■□□□□ 0.72
TM9SF1-209	ENST00000530468	OPTN	Q96CV9	577 aa		19.56	■□□□□ 0.72
TM9SF1-209	ENST00000530468	ERO1A	Q96HE7	468 aa		19.56	■□□□□ 0.72
TM9SF1-209	ENST00000530468	ELP3	Q9H9T3	547 aa		19.56	■□□□□ 0.72
TM9SF1-209	ENST00000530468	TRIM17	Q9Y577	477 aa		19.56	■□□□□ 0.72
TM9SF1-209	ENST00000530468	CRHR2	Q13324	411 aa		19.55	■□□□□ 0.72
TM9SF1-209	ENST00000530468	OTOP1	Q7RTM1	612 aa		19.55	■□□□□ 0.72
TM9SF1-209	ENST00000530468	TEKT1	Q969V4	418 aa		19.55	■□□□□ 0.72
TM9SF1-209	ENST00000530468	MRI	Q9BWK5	157 aa		19.55	■□□□□ 0.72
TM9SF1-209	ENST00000530468	TMEM39B	Q9GZU3	492 aa		19.55	■□□□□ 0.72
TM9SF1-209	ENST00000530468	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	19.55	■□□□□ 0.72
TM9SF1-209	ENST00000530468	SUGT1	Q9Y2Z0	365 aa		19.55	■□□□□ 0.72
TM9SF1-209	ENST00000530468	MAST3	O60307	1309 aa		19.54	■□□□□ 0.72
TM9SF1-209	ENST00000530468	PUM3	Q15397	648 aa	Known RBP	19.54	■□□□□ 0.72
TM9SF1-209	ENST00000530468	PRPF38B	Q5VTL8	546 aa	Known RBP	19.54	■□□□□ 0.72
TM9SF1-209	ENST00000530468	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	19.54	■□□□□ 0.72
TM9SF1-209	ENST00000530468	SSH1	Q8WYL5	1049 aa		19.54	■□□□□ 0.72
TM9SF1-209	ENST00000530468	USP44	Q9H0E7	712 aa		19.54	■□□□□ 0.72
TM9SF1-209	ENST00000530468	IFIT1	P09914	478 aa	Known RBP	19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	MAP3K9	P80192	1104 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	GRIK5	Q16478	980 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	INTS3	Q68E01	1043 aa	Known RBP	19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	CDAN1	Q8IWY9	1227 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	MS4A4A	Q96JQ5	239 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	ZDHHC15	Q96MV8	337 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	PTPN18	Q99952	460 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	TMOD2	Q9NZR1	351 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	CSAD	Q9Y600	493 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	OTOF	Q9HC10	1997 aa		19.53	■□□□□ 0.72
TM9SF1-209	ENST00000530468	TNRC18	O15417	2968 aa	Predicted RBP	19.52	■□□□□ 0.72
TM9SF1-209	ENST00000530468	FGFR2	P21802	821 aa		19.52	■□□□□ 0.72
TM9SF1-209	ENST00000530468	BCAM	P50895	628 aa		19.52	■□□□□ 0.72
TM9SF1-209	ENST00000530468	GTF2A2	P52657	109 aa		19.52	■□□□□ 0.72
TM9SF1-209	ENST00000530468	VGLL4	Q14135	290 aa		19.52	■□□□□ 0.72
TM9SF1-209	ENST00000530468	ALDH1L2	Q3SY69	923 aa		19.52	■□□□□ 0.72
TM9SF1-209	ENST00000530468	KLHDC4	Q8TBB5	520 aa		19.52	■□□□□ 0.72
TM9SF1-209	ENST00000530468	HOOK2	Q96ED9	719 aa		19.52	■□□□□ 0.72
TM9SF1-209	ENST00000530468	SP3	Q02447	781 aa		19.51	■□□□□ 0.71
TM9SF1-209	ENST00000530468	SLFN5	Q08AF3	891 aa		19.51	■□□□□ 0.71
TM9SF1-209	ENST00000530468	FKBP1C	Q5VVH2	108 aa		19.51	■□□□□ 0.71
TM9SF1-209	ENST00000530468	FAM83A	Q86UY5	434 aa		19.51	■□□□□ 0.71
TM9SF1-209	ENST00000530468	CD99L2	Q8TCZ2	262 aa		19.51	■□□□□ 0.71
TM9SF1-209	ENST00000530468	PDE4DIP	Q5VU43	2346 aa		19.5	■□□□□ 0.71
TM9SF1-209	ENST00000530468	EYA2	O00167	538 aa		19.5	■□□□□ 0.71
TM9SF1-209	ENST00000530468	SLC5A1	P13866	664 aa		19.5	■□□□□ 0.71
TM9SF1-209	ENST00000530468	HHIPL2	Q6UWX4	724 aa		19.5	■□□□□ 0.71
TM9SF1-209	ENST00000530468	LPIN2	Q92539	896 aa		19.5	■□□□□ 0.71
TM9SF1-209	ENST00000530468	EFCC1	Q9HA90	598 aa		19.5	■□□□□ 0.71
TM9SF1-209	ENST00000530468	PTPN22	Q9Y2R2	807 aa		19.5	■□□□□ 0.71
TM9SF1-209	ENST00000530468	RPAP1	Q9BWH6	1393 aa	Predicted RBP	19.49	■□□□□ 0.71
TM9SF1-209	ENST00000530468	CCL15-CCL14	A0A0B4J2E2	113 aa		19.49	■□□□□ 0.71
TM9SF1-209	ENST00000530468	RFX5	P48382	616 aa	Predicted RBP	19.49	■□□□□ 0.71
TM9SF1-209	ENST00000530468	CCL15	Q16663	113 aa		19.49	■□□□□ 0.71
TM9SF1-209	ENST00000530468	APOBEC3H	Q6NTF7	200 aa	Known RBP	19.49	■□□□□ 0.71
TM9SF1-209	ENST00000530468	WDR66	Q8TBY9	1149 aa		19.49	■□□□□ 0.71
TM9SF1-209	ENST00000530468	BRI3BP	Q8WY22	251 aa		19.49	■□□□□ 0.71
TM9SF1-209	ENST00000530468	ZFYVE28	Q9HCC9	887 aa		19.49	■□□□□ 0.71
TM9SF1-209	ENST00000530468	SPDYE5	A6NIY4	337 aa		19.48	■□□□□ 0.71
TM9SF1-209	ENST00000530468	CACNB3	P54284	484 aa		19.48	■□□□□ 0.71
TM9SF1-209	ENST00000530468	ARHGEF6	Q15052	776 aa		19.48	■□□□□ 0.71
TM9SF1-209	ENST00000530468	TAF1C	Q15572	869 aa	Predicted RBP	19.48	■□□□□ 0.71
TM9SF1-209	ENST00000530468	CNKSR2	Q8WXI2	1034 aa		19.48	■□□□□ 0.71
TM9SF1-209	ENST00000530468	OTUD5	Q96G74	571 aa		19.48	■□□□□ 0.71
TM9SF1-209	ENST00000530468	SMC4	Q9NTJ3	1288 aa		19.48	■□□□□ 0.71
TM9SF1-209	ENST00000530468	FBXO3	Q9UK99	471 aa		19.48	■□□□□ 0.71
TM9SF1-209	ENST00000530468	WDHD1	O75717	1129 aa	Predicted RBP	19.47	■□□□□ 0.71
TM9SF1-209	ENST00000530468	DCAF15	Q66K64	600 aa		19.47	■□□□□ 0.71
TM9SF1-209	ENST00000530468	ERO1B	Q86YB8	467 aa		19.47	■□□□□ 0.71
TM9SF1-209	ENST00000530468	WRNIP1	Q96S55	665 aa		19.47	■□□□□ 0.71
TM9SF1-209	ENST00000530468	ARMC5	Q96C12	935 aa		19.46	■□□□□ 0.71
TM9SF1-209	ENST00000530468	ZCCHC17	Q9NP64	241 aa	Known RBP	19.46	■□□□□ 0.71
TM9SF1-209	ENST00000530468	SNCAIP	Q9Y6H5	919 aa		19.46	■□□□□ 0.71
TM9SF1-209	ENST00000530468	CIAO1	O76071	339 aa		19.45	■□□□□ 0.7
TM9SF1-209	ENST00000530468	CT47B1	P0C2W7	299 aa	Predicted RBP	19.45	■□□□□ 0.7
TM9SF1-209	ENST00000530468	UBTFL1	P0CB47	393 aa	Predicted RBP	19.45	■□□□□ 0.7
TM9SF1-209	ENST00000530468	CETP	P11597	493 aa		19.45	■□□□□ 0.7
TM9SF1-209	ENST00000530468	ATG9A	Q7Z3C6	839 aa		19.45	■□□□□ 0.7
TM9SF1-209	ENST00000530468	FAM43A	Q8N2R8	423 aa		19.45	■□□□□ 0.7
TM9SF1-209	ENST00000530468	HDAC5	Q9UQL6	1122 aa		19.45	■□□□□ 0.7
TM9SF1-209	ENST00000530468	SNAPC2	Q13487	334 aa		19.44	■□□□□ 0.7
TM9SF1-209	ENST00000530468	ZNF341	Q9BYN7	854 aa		19.44	■□□□□ 0.7
TM9SF1-209	ENST00000530468	GNL3L	Q9NVN8	582 aa	Known RBP	19.44	■□□□□ 0.7
TM9SF1-209	ENST00000530468	POTEF	A5A3E0	1075 aa		19.43	■□□□□ 0.7
TM9SF1-209	ENST00000530468	PPIL2	Q13356	520 aa		19.43	■□□□□ 0.7
TM9SF1-209	ENST00000530468	FAM151A	Q8WW52	585 aa		19.43	■□□□□ 0.7
TM9SF1-209	ENST00000530468	ZKSCAN4	Q969J2	545 aa	Predicted RBP	19.43	■□□□□ 0.7
TM9SF1-209	ENST00000530468	PCDH10	Q9P2E7	1040 aa		19.43	■□□□□ 0.7
TM9SF1-209	ENST00000530468	CEP126	Q9P2H0	1117 aa		19.43	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms