RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 VPS37DQ86XT2 251 aa26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 DZIP1LQ8IYY4 767 aaKnown RBP26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 CFHR5Q9BXR6 569 aa26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 FBXO33Q7Z6M2 555 aa26.09■■□□□ 1.77
TSPAN4-219ENST00000530404 PTPRCP08575 1304 aa26.09■■□□□ 1.77
TSPAN4-219ENST00000530404 VGLL2Q8N8G2 317 aa26.08■■□□□ 1.77
TSPAN4-219ENST00000530404 ELP3Q9H9T3 547 aa26.08■■□□□ 1.77
TSPAN4-219ENST00000530404 FRAT2O75474 233 aaPredicted RBP26.07■■□□□ 1.76
TSPAN4-219ENST00000530404 ALDH1A1P00352 501 aa26.07■■□□□ 1.76
TSPAN4-219ENST00000530404 TNFAIP1Q13829 316 aa26.07■■□□□ 1.76
TSPAN4-219ENST00000530404 FBXO46Q6PJ61 603 aaPredicted RBP26.07■■□□□ 1.76
TSPAN4-219ENST00000530404 ANKRD13AQ8IZ07 590 aa26.07■■□□□ 1.76
TSPAN4-219ENST00000530404 TMEM39BQ9GZU3 492 aa26.07■■□□□ 1.76
TSPAN4-219ENST00000530404 USP44Q9H0E7 712 aa26.07■■□□□ 1.76
TSPAN4-219ENST00000530404 E9PSI1 815 aa26.06■■□□□ 1.76
TSPAN4-219ENST00000530404 PDE8BO95263 885 aa26.06■■□□□ 1.76
TSPAN4-219ENST00000530404 BCAMP50895 628 aa26.06■■□□□ 1.76
TSPAN4-219ENST00000530404 INHBEP58166 350 aa26.06■■□□□ 1.76
TSPAN4-219ENST00000530404 TEPSINQ96N21 525 aa26.06■■□□□ 1.76
TSPAN4-219ENST00000530404 CACNB3P54284 484 aa26.05■■□□□ 1.76
TSPAN4-219ENST00000530404 CAVIN4Q5BKX8 364 aa26.05■■□□□ 1.76
TSPAN4-219ENST00000530404 SLFN5Q08AF3 891 aa26.04■■□□□ 1.76
TSPAN4-219ENST00000530404 CNKSR2Q8WXI2 1034 aa26.04■■□□□ 1.76
TSPAN4-219ENST00000530404 OPTNQ96CV9 577 aa26.04■■□□□ 1.76
TSPAN4-219ENST00000530404 CDCA7LQ96GN5 454 aa26.04■■□□□ 1.76
TSPAN4-219ENST00000530404 ZSWIM8A7E2V4 1837 aa26.03■■□□□ 1.76
TSPAN4-219ENST00000530404 UNCXA6NJT0 531 aa26.03■■□□□ 1.76
TSPAN4-219ENST00000530404 PTPN18Q99952 460 aa26.03■■□□□ 1.76
TSPAN4-219ENST00000530404 TRIM17Q9Y577 477 aa26.03■■□□□ 1.76
TSPAN4-219ENST00000530404 MKI67P46013 3256 aaKnown RBP26.03■■□□□ 1.76
TSPAN4-219ENST00000530404 CRHR2Q13324 411 aa26.02■■□□□ 1.76
TSPAN4-219ENST00000530404 MYH2Q9UKX2 1941 aa26.02■■□□□ 1.76
TSPAN4-219ENST00000530404 SLC34A2O95436 690 aa26.01■■□□□ 1.75
TSPAN4-219ENST00000530404 TNNI2P48788 182 aa26.01■■□□□ 1.75
TSPAN4-219ENST00000530404 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-219ENST00000530404 TBC1D22AQ8WUA7 517 aa26.01■■□□□ 1.75
TSPAN4-219ENST00000530404 RBBP6Q7Z6E9 1792 aaKnown RBP26■■□□□ 1.75
TSPAN4-219ENST00000530404 FGFR2P21802 821 aa26■■□□□ 1.75
TSPAN4-219ENST00000530404 RFX5P48382 616 aaPredicted RBP26■■□□□ 1.75
TSPAN4-219ENST00000530404 OTOP1Q7RTM1 612 aa26■■□□□ 1.75
TSPAN4-219ENST00000530404 CD99L2Q8TCZ2 262 aa26■■□□□ 1.75
TSPAN4-219ENST00000530404 TEKT1Q969V4 418 aa26■■□□□ 1.75
TSPAN4-219ENST00000530404 SMC4Q9NTJ3 1288 aa26■■□□□ 1.75
TSPAN4-219ENST00000530404 BRCA2P51587 3418 aa26■■□□□ 1.75
TSPAN4-219ENST00000530404 VGLL4Q14135 290 aa25.99■■□□□ 1.75
TSPAN4-219ENST00000530404 PUM3Q15397 648 aaKnown RBP25.99■■□□□ 1.75
TSPAN4-219ENST00000530404 IFIT1P09914 478 aaKnown RBP25.98■■□□□ 1.75
TSPAN4-219ENST00000530404 HDLBPQ00341 1268 aaKnown RBP25.98■■□□□ 1.75
TSPAN4-219ENST00000530404 OTUD7BQ6GQQ9 843 aa25.98■■□□□ 1.75
TSPAN4-219ENST00000530404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.98■■□□□ 1.75
TSPAN4-219ENST00000530404 MS4A4AQ96JQ5 239 aa25.98■■□□□ 1.75
TSPAN4-219ENST00000530404 TESPA1A2RU30 521 aaPredicted RBP25.97■■□□□ 1.75
TSPAN4-219ENST00000530404 EYA2O00167 538 aa25.97■■□□□ 1.75
TSPAN4-219ENST00000530404 MAP3K9P80192 1104 aa25.97■■□□□ 1.75
TSPAN4-219ENST00000530404 ALDH1L2Q3SY69 923 aa25.97■■□□□ 1.75
TSPAN4-219ENST00000530404 KIAA0100Q14667 2235 aaKnown RBP25.97■■□□□ 1.75
TSPAN4-219ENST00000530404 CAP1Q01518 475 aa25.96■■□□□ 1.75
TSPAN4-219ENST00000530404 OTUD5Q96G74 571 aa25.96■■□□□ 1.75
TSPAN4-219ENST00000530404 ZDHHC15Q96MV8 337 aa25.96■■□□□ 1.75
TSPAN4-219ENST00000530404 SIL1Q9H173 461 aa25.96■■□□□ 1.75
TSPAN4-219ENST00000530404 SLC5A1P13866 664 aa25.95■■□□□ 1.74
TSPAN4-219ENST00000530404 APOBEC3HQ6NTF7 200 aaKnown RBP25.95■■□□□ 1.74
TSPAN4-219ENST00000530404 ATG9AQ7Z3C6 839 aa25.95■■□□□ 1.74
TSPAN4-219ENST00000530404 BRI3BPQ8WY22 251 aa25.95■■□□□ 1.74
TSPAN4-219ENST00000530404 ERO1AQ96HE7 468 aa25.95■■□□□ 1.74
TSPAN4-219ENST00000530404 CSADQ9Y600 493 aa25.95■■□□□ 1.74
TSPAN4-219ENST00000530404 KIF16BQ96L93 1317 aa25.94■■□□□ 1.74
TSPAN4-219ENST00000530404 DOCK2Q92608 1830 aa25.94■■□□□ 1.74
TSPAN4-219ENST00000530404 CCL15-CCL14A0A0B4J2E2 113 aa25.94■■□□□ 1.74
TSPAN4-219ENST00000530404 CCL15Q16663 113 aa25.94■■□□□ 1.74
TSPAN4-219ENST00000530404 TMOD2Q9NZR1 351 aa25.94■■□□□ 1.74
TSPAN4-219ENST00000530404 MAST3O60307 1309 aa25.93■■□□□ 1.74
TSPAN4-219ENST00000530404 LPIN2Q92539 896 aa25.93■■□□□ 1.74
TSPAN4-219ENST00000530404 UBTFL1P0CB47 393 aaPredicted RBP25.92■■□□□ 1.74
TSPAN4-219ENST00000530404 SP3Q02447 781 aa25.92■■□□□ 1.74
TSPAN4-219ENST00000530404 ZKSCAN4Q969J2 545 aaPredicted RBP25.92■■□□□ 1.74
TSPAN4-219ENST00000530404 WRNIP1Q96S55 665 aa25.92■■□□□ 1.74
TSPAN4-219ENST00000530404 NOB1Q9ULX3 412 aaKnown RBP25.92■■□□□ 1.74
TSPAN4-219ENST00000530404 SNCAIPQ9Y6H5 919 aa25.92■■□□□ 1.74
TSPAN4-219ENST00000530404 GTF2A2P52657 109 aa25.91■■□□□ 1.74
TSPAN4-219ENST00000530404 TAF1CQ15572 869 aaPredicted RBP25.91■■□□□ 1.74
TSPAN4-219ENST00000530404 TRMT2AQ8IZ69 625 aaKnown RBP25.91■■□□□ 1.74
TSPAN4-219ENST00000530404 FAM43AQ8N2R8 423 aa25.91■■□□□ 1.74
TSPAN4-219ENST00000530404 PTPN22Q9Y2R2 807 aa25.91■■□□□ 1.74
TSPAN4-219ENST00000530404 SUGT1Q9Y2Z0 365 aa25.91■■□□□ 1.74
TSPAN4-219ENST00000530404 HHIPL2Q6UWX4 724 aa25.9■■□□□ 1.74
TSPAN4-219ENST00000530404 FAM83AQ86UY5 434 aa25.9■■□□□ 1.74
TSPAN4-219ENST00000530404 MRIQ9BWK5 157 aa25.9■■□□□ 1.74
TSPAN4-219ENST00000530404 EFCC1Q9HA90 598 aa25.9■■□□□ 1.74
TSPAN4-219ENST00000530404 PA2G4Q9UQ80 394 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-219ENST00000530404 POTEFA5A3E0 1075 aa25.89■■□□□ 1.74
TSPAN4-219ENST00000530404 DIXDC1Q155Q3 683 aa25.89■■□□□ 1.74
TSPAN4-219ENST00000530404 ATP2B3Q16720 1220 aa25.89■■□□□ 1.74
TSPAN4-219ENST00000530404 MIGA2Q7L4E1 593 aa25.89■■□□□ 1.74
TSPAN4-219ENST00000530404 WDR66Q8TBY9 1149 aa25.89■■□□□ 1.74
TSPAN4-219ENST00000530404 LRRFIP2Q9Y608 721 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-219ENST00000530404 SPDYE5A6NIY4 337 aa25.88■■□□□ 1.73
TSPAN4-219ENST00000530404 PRDX5P30044 214 aa25.88■■□□□ 1.73
TSPAN4-219ENST00000530404 PRPF38BQ5VTL8 546 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-219ENST00000530404 DAGLAQ9Y4D2 1042 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms