RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 PRMT6Q96LA8 375 aaPredicted RBP9.45□□□□□ -0.9
NUP98-217ENST00000530345 A0A0C4DFX4 3053 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 MAST3O60307 1309 aa9.45□□□□□ -0.9
NUP98-217ENST00000530345 SPDYE5A6NIY4 337 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 CETPP11597 493 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 GJA5P36382 358 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 MAP3K9P80192 1104 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 LDHAL6AQ6ZMR3 332 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 TDRD7Q8NHU6 1098 aaKnown RBP9.44□□□□□ -0.9
NUP98-217ENST00000530345 NKX2-3Q8TAU0 364 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 CNKSR2Q8WXI2 1034 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 TSR2Q969E8 191 aaKnown RBP9.44□□□□□ -0.9
NUP98-217ENST00000530345 PTPN18Q99952 460 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 MRIQ9BWK5 157 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 CNNM1Q9NRU3 951 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 TMOD2Q9NZR1 351 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 ZNF70Q9UC06 446 aaPredicted RBP9.44□□□□□ -0.9
NUP98-217ENST00000530345 TTF2Q9UNY4 1162 aaKnown RBP9.44□□□□□ -0.9
NUP98-217ENST00000530345 SUGT1Q9Y2Z0 365 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 CHMP3Q9Y3E7 222 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 DOCK1Q14185 1865 aa9.44□□□□□ -0.9
NUP98-217ENST00000530345 MROH5Q6ZUA9 1318 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 KIF16BQ96L93 1317 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 CCL15-CCL14A0A0B4J2E2 113 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 F8W031 263 aaPredicted RBP9.43□□□□□ -0.9
NUP98-217ENST00000530345 GRM8O00222 908 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 TLR2O60603 784 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 TAF5LO75529 589 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 ALDH1L1O75891 902 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 HIBADHP31937 336 aaKnown RBP9.43□□□□□ -0.9
NUP98-217ENST00000530345 FXR1P51114 621 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUP98-217ENST00000530345 FOXO4P98177 505 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 VGLL4Q14135 290 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 CCL15Q16663 113 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 DCAF15Q66K64 600 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 G2E3Q7L622 706 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 FAM83AQ86UY5 434 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 ERO1BQ86YB8 467 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 WDR63Q8IWG1 891 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 DZIP1LQ8IYY4 767 aaKnown RBP9.43□□□□□ -0.9
NUP98-217ENST00000530345 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUP98-217ENST00000530345 TEPSINQ96N21 525 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 ELP3Q9H9T3 547 aa9.43□□□□□ -0.9
NUP98-217ENST00000530345 COL6A3P12111 3177 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 FANCIQ9NVI1 1328 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 EN2P19622 333 aaPredicted RBP9.42□□□□□ -0.9
NUP98-217ENST00000530345 PPIL2Q13356 520 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 SNAPC2Q13487 334 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 SLC4A8Q2Y0W8 1093 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 BEND3Q5T5X7 828 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 LMBR1LQ6UX01 489 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
NUP98-217ENST00000530345 BRI3BPQ8WY22 251 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 TEKT1Q969V4 418 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 FZD1Q9UP38 647 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 PHIPQ8WWQ0 1821 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 ATAD5Q96QE3 1844 aa9.42□□□□□ -0.9
NUP98-217ENST00000530345 LAMA3Q16787 3333 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 HOXD10P28358 340 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 CRKP46108 304 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 LACTBP83111 547 aaPredicted RBP9.41□□□□□ -0.9
NUP98-217ENST00000530345 MAPK8IP2Q13387 824 aaPredicted RBP9.41□□□□□ -0.9
NUP98-217ENST00000530345 CAVIN4Q5BKX8 364 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 VPS37DQ86XT2 251 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 ZDHHC15Q96MV8 337 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 TDRD3Q9H7E2 651 aaKnown RBP9.41□□□□□ -0.9
NUP98-217ENST00000530345 C9orf78Q9NZ63 289 aaPredicted RBP9.41□□□□□ -0.9
NUP98-217ENST00000530345 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 ALPK3Q96L96 1907 aa9.41□□□□□ -0.9
NUP98-217ENST00000530345 VAMP4O75379 141 aa9.4□□□□□ -0.9
NUP98-217ENST00000530345 PPATQ06203 517 aa9.4□□□□□ -0.9
NUP98-217ENST00000530345 FAM84BQ96KN1 310 aaPredicted RBP9.4□□□□□ -0.9
NUP98-217ENST00000530345 HTATIP2Q9BUP3 242 aa9.4□□□□□ -0.9
NUP98-217ENST00000530345 PCDHAC2Q9Y5I4 1007 aa9.4□□□□□ -0.9
NUP98-217ENST00000530345 A0A1W2PPC1 479 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 TCP10L2B9ZVM9 353 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 SNAP23O00161 211 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 FRAT2O75474 233 aaPredicted RBP9.39□□□□□ -0.91
NUP98-217ENST00000530345 HHIPL2Q6UWX4 724 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 FAM43AQ8N2R8 423 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 WRNIP1Q96S55 665 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 ZNF341Q9BYN7 854 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 SRCIN1Q9C0H9 1055 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 TMEM39BQ9GZU3 492 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 SNCAIPQ9Y6H5 919 aa9.39□□□□□ -0.91
NUP98-217ENST00000530345 UTYO14607 1347 aa9.38□□□□□ -0.91
NUP98-217ENST00000530345 AOX1Q06278 1338 aa9.38□□□□□ -0.91
NUP98-217ENST00000530345 LOC285556D6RIA3 1793 aa9.38□□□□□ -0.91
NUP98-217ENST00000530345 IRF6O14896 467 aa9.38□□□□□ -0.91
NUP98-217ENST00000530345 PLIN1O60240 522 aa9.38□□□□□ -0.91
NUP98-217ENST00000530345 GYG1P46976 350 aa9.38□□□□□ -0.91
NUP98-217ENST00000530345 RABL6Q3YEC7 729 aaPredicted RBP9.38□□□□□ -0.91
NUP98-217ENST00000530345 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
NUP98-217ENST00000530345 PARK7Q99497 189 aaKnown RBP9.38□□□□□ -0.91
NUP98-217ENST00000530345 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
NUP98-217ENST00000530345 SRRDQ9UH36 339 aa9.38□□□□□ -0.91
NUP98-217ENST00000530345 COLQQ9Y215 455 aaPredicted RBP9.38□□□□□ -0.91
NUP98-217ENST00000530345 RIPOR2Q9Y4F9 1068 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms