RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PTH1RQ03431 593 aa17.29■□□□□ 0.36
TTC39A-216ENST00000530004 RABEP1Q15276 862 aa17.29■□□□□ 0.36
TTC39A-216ENST00000530004 ZNF589Q86UQ0 364 aaPredicted RBP17.29■□□□□ 0.36
TTC39A-216ENST00000530004 PALD1Q9ULE6 856 aa17.29■□□□□ 0.36
TTC39A-216ENST00000530004 AKAP11Q9UKA4 1901 aa17.29■□□□□ 0.36
TTC39A-216ENST00000530004 CCDC171Q6TFL3 1326 aa17.29■□□□□ 0.36
TTC39A-216ENST00000530004 ZNF541Q9H0D2 1346 aa17.29■□□□□ 0.36
TTC39A-216ENST00000530004 HSPA4P34932 840 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 FKBP1AP62942 108 aaKnown RBP17.28■□□□□ 0.36
TTC39A-216ENST00000530004 TNIP1Q15025 636 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 TTF1Q15361 905 aaPredicted RBP17.28■□□□□ 0.36
TTC39A-216ENST00000530004 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
TTC39A-216ENST00000530004 ZGPATQ8N5A5 531 aaKnown RBP17.28■□□□□ 0.36
TTC39A-216ENST00000530004 CERS5Q8N5B7 392 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 MXD3Q9BW11 206 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
TTC39A-216ENST00000530004 ABCF2Q9UG63 623 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 CCDC88AQ3V6T2 1871 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 RNF113AO15541 343 aaKnown RBP17.28■□□□□ 0.36
TTC39A-216ENST00000530004 ANAPC15P60006 121 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 SLFNL1Q499Z3 407 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 RSBN1LQ6PCB5 846 aaPredicted RBP17.28■□□□□ 0.36
TTC39A-216ENST00000530004 HSCBQ8IWL3 235 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 SNX21Q969T3 373 aa17.28■□□□□ 0.36
TTC39A-216ENST00000530004 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
TTC39A-216ENST00000530004 ZC3H4Q9UPT8 1303 aaKnown RBP17.27■□□□□ 0.36
TTC39A-216ENST00000530004 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.36
TTC39A-216ENST00000530004 PRDX5P30044 214 aa17.27■□□□□ 0.35
TTC39A-216ENST00000530004 ZMYM1Q5SVZ6 1142 aa17.27■□□□□ 0.35
TTC39A-216ENST00000530004 HELLSQ9NRZ9 838 aa17.27■□□□□ 0.35
TTC39A-216ENST00000530004 ZFYP08048 801 aaPredicted RBP17.26■□□□□ 0.35
TTC39A-216ENST00000530004 GRIK5Q16478 980 aa17.26■□□□□ 0.35
TTC39A-216ENST00000530004 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
TTC39A-216ENST00000530004 LRP2BPQ9P2M1 347 aa17.26■□□□□ 0.35
TTC39A-216ENST00000530004 SUGT1Q9Y2Z0 365 aa17.26■□□□□ 0.35
TTC39A-216ENST00000530004 MYO3BQ8WXR4 1341 aa17.26■□□□□ 0.35
TTC39A-216ENST00000530004 IDH1O75874 414 aaKnown RBP17.25■□□□□ 0.35
TTC39A-216ENST00000530004 SPTY2D1Q68D10 685 aaPredicted RBP17.25■□□□□ 0.35
TTC39A-216ENST00000530004 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
TTC39A-216ENST00000530004 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.25■□□□□ 0.35
TTC39A-216ENST00000530004 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
TTC39A-216ENST00000530004 LDHBP07195 334 aaKnown RBP17.25■□□□□ 0.35
TTC39A-216ENST00000530004 GPC2Q8N158 579 aa17.25■□□□□ 0.35
TTC39A-216ENST00000530004 AGBL3Q8NEM8 1001 aa17.25■□□□□ 0.35
TTC39A-216ENST00000530004 MAP4K1Q92918 833 aa17.25■□□□□ 0.35
TTC39A-216ENST00000530004 IL17RAQ96F46 866 aa17.25■□□□□ 0.35
TTC39A-216ENST00000530004 GMLQ99445 158 aa17.25■□□□□ 0.35
TTC39A-216ENST00000530004 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
TTC39A-216ENST00000530004 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
TTC39A-216ENST00000530004 ZSCAN25Q6NSZ9 544 aa17.24■□□□□ 0.35
TTC39A-216ENST00000530004 DPY19L2Q6NUT2 758 aa17.24■□□□□ 0.35
TTC39A-216ENST00000530004 KIAA0825Q8IV33 1275 aa17.24■□□□□ 0.35
TTC39A-216ENST00000530004 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
TTC39A-216ENST00000530004 RBM8AQ9Y5S9 174 aaKnown RBP17.24■□□□□ 0.35
TTC39A-216ENST00000530004 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
TTC39A-216ENST00000530004 ZNF646O15015 1829 aaPredicted RBP17.23■□□□□ 0.35
TTC39A-216ENST00000530004 PSME4Q14997 1843 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 IGSF3O75054 1194 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 DDNO94850 711 aaPredicted RBP17.23■□□□□ 0.35
TTC39A-216ENST00000530004 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
TTC39A-216ENST00000530004 RPS12P25398 132 aaKnown RBP17.23■□□□□ 0.35
TTC39A-216ENST00000530004 MAP3K12Q12852 859 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 NECTIN1Q15223 517 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 SNX14Q9Y5W7 946 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 MAST3O60307 1309 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
TTC39A-216ENST00000530004 M0R2C6 588 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 MECOMQ03112 1051 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 APPBP2Q92624 585 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 DPF2Q92785 391 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 OSBP2Q969R2 916 aa17.23■□□□□ 0.35
TTC39A-216ENST00000530004 NSUN4Q96CB9 384 aaKnown RBP17.23■□□□□ 0.35
TTC39A-216ENST00000530004 TTF2Q9UNY4 1162 aaKnown RBP17.23■□□□□ 0.35
TTC39A-216ENST00000530004 ST18O60284 1047 aa17.22■□□□□ 0.35
TTC39A-216ENST00000530004 ADD2P35612 726 aa17.22■□□□□ 0.35
TTC39A-216ENST00000530004 GMPSP49915 693 aaPredicted RBP17.22■□□□□ 0.35
TTC39A-216ENST00000530004 SLC9C2Q5TAH2 1124 aa17.22■□□□□ 0.35
TTC39A-216ENST00000530004 DZIP1Q86YF9 867 aaKnown RBP17.22■□□□□ 0.35
TTC39A-216ENST00000530004 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
TTC39A-216ENST00000530004 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
TTC39A-216ENST00000530004 CREB3L3Q68CJ9 461 aa17.21■□□□□ 0.35
TTC39A-216ENST00000530004 USP17L8P0C7I0 530 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 PDE6AP16499 860 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 NEK4P51957 841 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 MAGEB6Q8N7X4 407 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 KCNB2Q92953 911 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 MYH7P12883 1935 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
TTC39A-216ENST00000530004 SLC27A2O14975 620 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 SCNN1DP51172 638 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 UBE3CQ15386 1083 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 DIXDC1Q155Q3 683 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
TTC39A-216ENST00000530004 OGFOD1Q8N543 542 aa17.2■□□□□ 0.34
TTC39A-216ENST00000530004 PUS7LQ9H0K6 701 aaKnown RBP17.2■□□□□ 0.34
TTC39A-216ENST00000530004 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
TTC39A-216ENST00000530004 ZNF532Q9HCE3 1301 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms