RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 IL1R1P14778 569 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 VEGFBP49765 207 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 RASGRF1Q13972 1273 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 TNNI3KQ59H18 835 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 ZC3H15Q8WU90 426 aaKnown RBP5.66□□□□□ -1.5
USP47-208ENST00000529813 AIDAQ96BJ3 306 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 KLRG1Q96E93 195 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 CAPNS2Q96L46 248 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 NOL10Q9BSC4 688 aaKnown RBP5.66□□□□□ -1.5
USP47-208ENST00000529813 DEFB129Q9H1M3 183 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 CREBZFQ9NS37 354 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 TLR7Q9NYK1 1049 aaKnown RBP5.66□□□□□ -1.5
USP47-208ENST00000529813 DENND2AQ9ULE3 1009 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 FPGT-TNNI3KV9GXZ4 949 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 SBF1O95248 1867 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 FER1L6Q2WGJ9 1857 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 RASA3Q14644 834 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 CST9Q5W186 159 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 ERICH6Q7L0X2 663 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 VGLL2Q8N8G2 317 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 GMLQ99445 158 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 CAPN15O75808 1086 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 FGFR2P21802 821 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 PDE3AQ14432 1141 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 HSP90AB4PQ58FF6 505 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 MIGA2Q7L4E1 593 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 SSH3Q8TE77 659 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 USP40Q9NVE5 1235 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 DDX60Q8IY21 1712 aaKnown RBP5.65□□□□□ -1.5
USP47-208ENST00000529813 AOX1Q06278 1338 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 SPDYE2BA6NHP3 402 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 PPP1R12BO60237 982 aaPredicted RBP5.65□□□□□ -1.5
USP47-208ENST00000529813 SPDYE6P0CI01 402 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 ZNF280AP59817 542 aaPredicted RBP5.65□□□□□ -1.5
USP47-208ENST00000529813 NBPF12Q5TAG4 269 aaPredicted RBP5.65□□□□□ -1.5
USP47-208ENST00000529813 TSHZ3Q63HK5 1081 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 ERC1Q8IUD2 1116 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 RPAP2Q8IXW5 612 aaPredicted RBP5.65□□□□□ -1.5
USP47-208ENST00000529813 SPATA5Q8NB90 893 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 EAF2Q96CJ1 260 aaPredicted RBP5.65□□□□□ -1.5
USP47-208ENST00000529813 TMEM39BQ9GZU3 492 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 BOLA2Q9H3K6 86 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 ZBTB40Q9NUA8 1239 aa5.65□□□□□ -1.5
USP47-208ENST00000529813 ZNF70Q9UC06 446 aaPredicted RBP5.65□□□□□ -1.5
USP47-208ENST00000529813 PCNTO95613 3336 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 DUOX1Q9NRD9 1551 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 MAP4K4O95819 1239 aaPredicted RBP5.65□□□□□ -1.51
USP47-208ENST00000529813 HSPA1AP0DMV8 641 aaKnown RBP5.65□□□□□ -1.51
USP47-208ENST00000529813 HSPA1BP0DMV9 641 aaKnown RBP5.65□□□□□ -1.51
USP47-208ENST00000529813 ECE1P42892 770 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 ZAP70P43403 619 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 TNNI2P48788 182 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 ARMC9Q7Z3E5 817 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 APOBEC3FQ8IUX4 373 aaKnown RBP5.65□□□□□ -1.51
USP47-208ENST00000529813 EXOC6Q8TAG9 804 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 HMG20BQ9P0W2 317 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 FBXO3Q9UK99 471 aa5.65□□□□□ -1.51
USP47-208ENST00000529813 DLEC1Q9Y238 1755 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 UQCRFS1P1P0C7P4 283 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 MTX1Q13505 466 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 TNFAIP1Q13829 316 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 ANKRD45Q5TZF3 282 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 SPTY2D1Q68D10 685 aaPredicted RBP5.64□□□□□ -1.51
USP47-208ENST00000529813 CDAN1Q8IWY9 1227 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 MIGA1Q8NAN2 632 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 KIF1BPQ96EK5 621 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 DBNLQ9UJU6 430 aaKnown RBP5.64□□□□□ -1.51
USP47-208ENST00000529813 WDR33Q9C0J8 1336 aaKnown RBP5.64□□□□□ -1.51
USP47-208ENST00000529813 LAMB2P55268 1798 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 GOLIM4O00461 696 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 POLA2Q14181 598 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 SUPT20HL1Q3ZLR7 823 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 NAA16Q6N069 864 aaPredicted RBP5.64□□□□□ -1.51
USP47-208ENST00000529813 C15orf52Q6ZUT6 534 aaKnown RBP5.64□□□□□ -1.51
USP47-208ENST00000529813 SAPCD2Q86UD0 394 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 SLC10A4Q96EP9 437 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 EDC3Q96F86 508 aaKnown RBP5.64□□□□□ -1.51
USP47-208ENST00000529813 ANP32EQ9BTT0 268 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 LRRCC1Q9C099 1032 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 MAST3O60307 1309 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 FAM205AQ6ZU69 1335 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 TIAM2Q8IVF5 1701 aa5.64□□□□□ -1.51
USP47-208ENST00000529813 CYP7A1P22680 504 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 MCAMP43121 646 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 BTDP43251 543 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 RGMBQ6NW40 437 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 SIRT2Q8IXJ6 389 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 STK11IPQ8N1F8 1099 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 ZGPATQ8N5A5 531 aaKnown RBP5.63□□□□□ -1.51
USP47-208ENST00000529813 ZIC5Q96T25 663 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 TRIM34Q9BYJ4 488 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 AATFQ9NY61 560 aaKnown RBP eCLIP5.63□□□□□ -1.51
USP47-208ENST00000529813 DAGLAQ9Y4D2 1042 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 PASKQ96RG2 1323 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 FAM196BA6NMK8 535 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 TRPA1O75762 1119 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 MECOMQ03112 1051 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 SLF2Q8IX21 1173 aa5.63□□□□□ -1.51
USP47-208ENST00000529813 DNAJC5GQ8N7S2 189 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms