RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 KLRK1P26718 216 aa11.49□□□□□ -0.57
VPS11-203ENST00000529545 CHRNDQ07001 517 aa11.49□□□□□ -0.57
VPS11-203ENST00000529545 ZNF804AQ7Z570 1209 aa11.49□□□□□ -0.57
VPS11-203ENST00000529545 PLA2G12BQ9BX93 195 aa11.49□□□□□ -0.57
VPS11-203ENST00000529545 MYH16Q9H6N6 1097 aa11.49□□□□□ -0.57
VPS11-203ENST00000529545 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
VPS11-203ENST00000529545 PSEN1P49768 467 aa11.48□□□□□ -0.57
VPS11-203ENST00000529545 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
VPS11-203ENST00000529545 TNFAIP1Q13829 316 aa11.48□□□□□ -0.57
VPS11-203ENST00000529545 CFAP100Q494V2 611 aa11.48□□□□□ -0.57
VPS11-203ENST00000529545 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
VPS11-203ENST00000529545 LAMB1P07942 1786 aa11.48□□□□□ -0.57
VPS11-203ENST00000529545 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
VPS11-203ENST00000529545 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
VPS11-203ENST00000529545 FKBP1AP62942 108 aaKnown RBP11.47□□□□□ -0.57
VPS11-203ENST00000529545 GCKRQ14397 625 aa11.47□□□□□ -0.57
VPS11-203ENST00000529545 RASA3Q14644 834 aa11.47□□□□□ -0.57
VPS11-203ENST00000529545 SLC4A8Q2Y0W8 1093 aa11.47□□□□□ -0.57
VPS11-203ENST00000529545 SLC9C1Q4G0N8 1177 aa11.47□□□□□ -0.57
VPS11-203ENST00000529545 C15orf52Q6ZUT6 534 aaKnown RBP11.47□□□□□ -0.57
VPS11-203ENST00000529545 CERS5Q8N5B7 392 aa11.47□□□□□ -0.57
VPS11-203ENST00000529545 TSPYL6Q8N831 410 aa11.47□□□□□ -0.57
VPS11-203ENST00000529545 PRMT6Q96LA8 375 aaPredicted RBP11.47□□□□□ -0.57
VPS11-203ENST00000529545 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
VPS11-203ENST00000529545 KIAA0100Q14667 2235 aaKnown RBP11.47□□□□□ -0.57
VPS11-203ENST00000529545 SSC5DA1L4H1 1573 aa11.46□□□□□ -0.57
VPS11-203ENST00000529545 TAF5LO75529 589 aa11.46□□□□□ -0.57
VPS11-203ENST00000529545 CSF1RP07333 972 aa11.46□□□□□ -0.57
VPS11-203ENST00000529545 IL1R1P14778 569 aa11.46□□□□□ -0.57
VPS11-203ENST00000529545 FXR1P51114 621 aaKnown RBP eCLIP11.46□□□□□ -0.57
VPS11-203ENST00000529545 IFIT5Q13325 482 aaKnown RBP11.46□□□□□ -0.57
VPS11-203ENST00000529545 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
VPS11-203ENST00000529545 OPTNQ96CV9 577 aa11.46□□□□□ -0.57
VPS11-203ENST00000529545 ELP3Q9H9T3 547 aa11.46□□□□□ -0.57
VPS11-203ENST00000529545 PLCG2P16885 1265 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 GJA5P36382 358 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 GTF2A2P52657 109 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 KIF22Q14807 665 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
VPS11-203ENST00000529545 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 PTPN18Q99952 460 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 PCDHAC2Q9Y5I4 1007 aa11.45□□□□□ -0.58
VPS11-203ENST00000529545 CCL15-CCL14A0A0B4J2E2 113 aa11.44□□□□□ -0.58
VPS11-203ENST00000529545 TNNI2P48788 182 aa11.44□□□□□ -0.58
VPS11-203ENST00000529545 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
VPS11-203ENST00000529545 CCL15Q16663 113 aa11.44□□□□□ -0.58
VPS11-203ENST00000529545 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
VPS11-203ENST00000529545 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
VPS11-203ENST00000529545 G2E3Q7L622 706 aa11.44□□□□□ -0.58
VPS11-203ENST00000529545 LINS1Q8NG48 757 aa11.44□□□□□ -0.58
VPS11-203ENST00000529545 DNAAF4Q8WXU2 420 aa11.44□□□□□ -0.58
VPS11-203ENST00000529545 COLQQ9Y215 455 aaPredicted RBP11.44□□□□□ -0.58
VPS11-203ENST00000529545 CSADQ9Y600 493 aa11.44□□□□□ -0.58
VPS11-203ENST00000529545 SNAP23O00161 211 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 PLIN1O60240 522 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 CASP7P55210 303 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 MAP3K9P80192 1104 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 FLIIQ13045 1269 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
VPS11-203ENST00000529545 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 ZNF70Q9UC06 446 aaPredicted RBP11.43□□□□□ -0.58
VPS11-203ENST00000529545 SERPINA10Q9UK55 444 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 TTF2Q9UNY4 1162 aaKnown RBP11.43□□□□□ -0.58
VPS11-203ENST00000529545 JAG2Q9Y219 1238 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 PTCH2Q9Y6C5 1203 aa11.43□□□□□ -0.58
VPS11-203ENST00000529545 IRS2Q9Y4H2 1338 aa11.42□□□□□ -0.58
VPS11-203ENST00000529545 MYCP01106 439 aaPredicted RBP11.42□□□□□ -0.58
VPS11-203ENST00000529545 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
VPS11-203ENST00000529545 CCDC57Q2TAC2 916 aa11.42□□□□□ -0.58
VPS11-203ENST00000529545 MFSD14BQ5SR56 506 aa11.42□□□□□ -0.58
VPS11-203ENST00000529545 LDHAL6AQ6ZMR3 332 aa11.42□□□□□ -0.58
VPS11-203ENST00000529545 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.42□□□□□ -0.58
VPS11-203ENST00000529545 BRI3BPQ8WY22 251 aa11.42□□□□□ -0.58
VPS11-203ENST00000529545 TDRD3Q9H7E2 651 aaKnown RBP11.42□□□□□ -0.58
VPS11-203ENST00000529545 CNNM1Q9NRU3 951 aa11.42□□□□□ -0.58
VPS11-203ENST00000529545 OTOFQ9HC10 1997 aa11.41□□□□□ -0.58
VPS11-203ENST00000529545 FAM205AQ6ZU69 1335 aa11.41□□□□□ -0.58
VPS11-203ENST00000529545 TCP10L2B9ZVM9 353 aa11.41□□□□□ -0.58
VPS11-203ENST00000529545 GNRH1P01148 92 aa11.41□□□□□ -0.58
VPS11-203ENST00000529545 CETPP11597 493 aa11.41□□□□□ -0.58
VPS11-203ENST00000529545 VGLL4Q14135 290 aa11.41□□□□□ -0.58
VPS11-203ENST00000529545 DZIP1LQ8IYY4 767 aaKnown RBP11.41□□□□□ -0.58
VPS11-203ENST00000529545 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
VPS11-203ENST00000529545 AOX1Q06278 1338 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 CACNA1FO60840 1977 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 H0YGN5 161 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 HIBADHP31937 336 aaKnown RBP11.4□□□□□ -0.58
VPS11-203ENST00000529545 PRMT2P55345 433 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 FOXO4P98177 505 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 CAP1Q01518 475 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 FAM43AQ8N2R8 423 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 TDRD7Q8NHU6 1098 aaKnown RBP11.4□□□□□ -0.58
VPS11-203ENST00000529545 HOOK2Q96ED9 719 aa11.4□□□□□ -0.58
VPS11-203ENST00000529545 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
VPS11-203ENST00000529545 ZCCHC17Q9NP64 241 aaKnown RBP11.4□□□□□ -0.58
VPS11-203ENST00000529545 TMOD2Q9NZR1 351 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms