RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
TRIM3-209ENST00000529529 TCP10L2B9ZVM9 353 aa20.19■□□□□ 0.82
TRIM3-209ENST00000529529 SLC5A1P13866 664 aa20.19■□□□□ 0.82
TRIM3-209ENST00000529529 IREB2P48200 963 aaKnown RBP20.19■□□□□ 0.82
TRIM3-209ENST00000529529 HDLBPQ00341 1268 aaKnown RBP20.19■□□□□ 0.82
TRIM3-209ENST00000529529 LRRFIP2Q9Y608 721 aaKnown RBP20.19■□□□□ 0.82
TRIM3-209ENST00000529529 AKAP11Q9UKA4 1901 aa20.19■□□□□ 0.82
TRIM3-209ENST00000529529 SSC5DA1L4H1 1573 aa20.18■□□□□ 0.82
TRIM3-209ENST00000529529 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
TRIM3-209ENST00000529529 TEKT1Q969V4 418 aa20.18■□□□□ 0.82
TRIM3-209ENST00000529529 WNK4Q96J92 1243 aa20.18■□□□□ 0.82
TRIM3-209ENST00000529529 CEP126Q9P2H0 1117 aa20.18■□□□□ 0.82
TRIM3-209ENST00000529529 TNNI2P48788 182 aa20.17■□□□□ 0.82
TRIM3-209ENST00000529529 INHBEP58166 350 aa20.17■□□□□ 0.82
TRIM3-209ENST00000529529 CTU1Q7Z7A3 348 aaKnown RBP20.17■□□□□ 0.82
TRIM3-209ENST00000529529 ZNF296Q8WUU4 475 aaPredicted RBP20.17■□□□□ 0.82
TRIM3-209ENST00000529529 ARHGAP45Q92619 1136 aa20.17■□□□□ 0.82
TRIM3-209ENST00000529529 MRIQ9BWK5 157 aa20.17■□□□□ 0.82
TRIM3-209ENST00000529529 FBXO3Q9UK99 471 aa20.17■□□□□ 0.82
TRIM3-209ENST00000529529 KIF16BQ96L93 1317 aa20.17■□□□□ 0.82
TRIM3-209ENST00000529529 MANSC4A6NHS7 340 aaPredicted RBP20.16■□□□□ 0.82
TRIM3-209ENST00000529529 GPR25O00155 361 aa20.16■□□□□ 0.82
TRIM3-209ENST00000529529 CIAO1O76071 339 aa20.16■□□□□ 0.82
TRIM3-209ENST00000529529 ZBTB48P10074 688 aaPredicted RBP20.16■□□□□ 0.82
TRIM3-209ENST00000529529 ANKRD13AQ8IZ07 590 aa20.16■□□□□ 0.82
TRIM3-209ENST00000529529 TEPSINQ96N21 525 aa20.16■□□□□ 0.82
TRIM3-209ENST00000529529 MEIS3Q99687 375 aa20.16■□□□□ 0.82
TRIM3-209ENST00000529529 TMEM39BQ9GZU3 492 aa20.16■□□□□ 0.82
TRIM3-209ENST00000529529 CACNB3P54284 484 aa20.15■□□□□ 0.82
TRIM3-209ENST00000529529 ATP2B3Q16720 1220 aa20.15■□□□□ 0.82
TRIM3-209ENST00000529529 INTS3Q68E01 1043 aaKnown RBP20.15■□□□□ 0.82
TRIM3-209ENST00000529529 CDAN1Q8IWY9 1227 aa20.15■□□□□ 0.82
TRIM3-209ENST00000529529 WDR66Q8TBY9 1149 aa20.15■□□□□ 0.82
TRIM3-209ENST00000529529 R3HDMLQ9H3Y0 253 aa20.15■□□□□ 0.82
TRIM3-209ENST00000529529 PA2G4Q9UQ80 394 aaKnown RBP20.15■□□□□ 0.82
TRIM3-209ENST00000529529 SUGT1Q9Y2Z0 365 aa20.15■□□□□ 0.82
TRIM3-209ENST00000529529 ALDH1A1P00352 501 aa20.14■□□□□ 0.81
TRIM3-209ENST00000529529 IL15P40933 162 aaPredicted RBP20.14■□□□□ 0.81
TRIM3-209ENST00000529529 RGS19P49795 217 aa20.14■□□□□ 0.81
TRIM3-209ENST00000529529 ZDHHC15Q96MV8 337 aa20.14■□□□□ 0.81
TRIM3-209ENST00000529529 MAST3O60307 1309 aa20.13■□□□□ 0.81
TRIM3-209ENST00000529529 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
TRIM3-209ENST00000529529 MLLT1Q03111 559 aaPredicted RBP20.13■□□□□ 0.81
TRIM3-209ENST00000529529 APOBEC3HQ6NTF7 200 aaKnown RBP20.13■□□□□ 0.81
TRIM3-209ENST00000529529 HHIPL2Q6UWX4 724 aa20.13■□□□□ 0.81
TRIM3-209ENST00000529529 IFNL1Q8IU54 200 aa20.13■□□□□ 0.81
TRIM3-209ENST00000529529 CFHR5Q9BXR6 569 aa20.13■□□□□ 0.81
TRIM3-209ENST00000529529 ELP3Q9H9T3 547 aa20.13■□□□□ 0.81
TRIM3-209ENST00000529529 COPRSQ9NQ92 184 aa20.13■□□□□ 0.81
TRIM3-209ENST00000529529 GNL3LQ9NVN8 582 aaKnown RBP20.13■□□□□ 0.81
TRIM3-209ENST00000529529 ECM29Q5VYK3 1845 aa20.13■□□□□ 0.81
TRIM3-209ENST00000529529 GNAI3P08754 354 aa20.12■□□□□ 0.81
TRIM3-209ENST00000529529 GJA5P36382 358 aa20.12■□□□□ 0.81
TRIM3-209ENST00000529529 NOM1Q5C9Z4 860 aaKnown RBP20.12■□□□□ 0.81
TRIM3-209ENST00000529529 FRAT1Q92837 279 aaPredicted RBP20.12■□□□□ 0.81
TRIM3-209ENST00000529529 TMOD2Q9NZR1 351 aa20.12■□□□□ 0.81
TRIM3-209ENST00000529529 FKTNO75072 461 aa20.11■□□□□ 0.81
TRIM3-209ENST00000529529 BCAR3O75815 825 aa20.11■□□□□ 0.81
TRIM3-209ENST00000529529 MAP3K9P80192 1104 aa20.11■□□□□ 0.81
TRIM3-209ENST00000529529 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.11■□□□□ 0.81
TRIM3-209ENST00000529529 IGF2BP3O00425 579 aaKnown RBP eCLIP20.1■□□□□ 0.81
TRIM3-209ENST00000529529 PKN2Q16513 984 aaKnown RBP20.1■□□□□ 0.81
TRIM3-209ENST00000529529 OPTNQ96CV9 577 aa20.1■□□□□ 0.81
TRIM3-209ENST00000529529 SRGAP3O43295 1099 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 TRIM27P14373 513 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 PHKA1P46020 1223 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 TIMM10P62072 90 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 FKBP1CQ5VVH2 108 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 OTUD7BQ6GQQ9 843 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 FAM83AQ86UY5 434 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 MIER1Q8N108 512 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 DENND2AQ9ULE3 1009 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 TNNQ9UQP3 1299 aa20.09■□□□□ 0.81
TRIM3-209ENST00000529529 ADORA1P30542 326 aa20.08■□□□□ 0.81
TRIM3-209ENST00000529529 DIXDC1Q155Q3 683 aa20.08■□□□□ 0.81
TRIM3-209ENST00000529529 ATF7IPQ6VMQ6 1270 aa20.08■□□□□ 0.81
TRIM3-209ENST00000529529 CLUAP1Q96AJ1 413 aa20.08■□□□□ 0.81
TRIM3-209ENST00000529529 PTPN18Q99952 460 aa20.08■□□□□ 0.81
TRIM3-209ENST00000529529 HPS5Q9UPZ3 1129 aa20.08■□□□□ 0.81
TRIM3-209ENST00000529529 CSADQ9Y600 493 aa20.08■□□□□ 0.81
TRIM3-209ENST00000529529 TESPA1A2RU30 521 aaPredicted RBP20.07■□□□□ 0.8
TRIM3-209ENST00000529529 SEMA3EO15041 775 aa20.07■□□□□ 0.8
TRIM3-209ENST00000529529 LDHBP07195 334 aaKnown RBP20.07■□□□□ 0.8
TRIM3-209ENST00000529529 PRDX5P30044 214 aa20.07■□□□□ 0.8
TRIM3-209ENST00000529529 VGLL4Q14135 290 aa20.07■□□□□ 0.8
TRIM3-209ENST00000529529 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
TRIM3-209ENST00000529529 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.07■□□□□ 0.8
TRIM3-209ENST00000529529 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
TRIM3-209ENST00000529529 HOOK2Q96ED9 719 aa20.07■□□□□ 0.8
TRIM3-209ENST00000529529 ARAP2Q8WZ64 1704 aa20.07■□□□□ 0.8
TRIM3-209ENST00000529529 SOX10P56693 466 aa20.06■□□□□ 0.8
TRIM3-209ENST00000529529 TFCP2Q12800 502 aa20.06■□□□□ 0.8
TRIM3-209ENST00000529529 MTX1Q13505 466 aa20.06■□□□□ 0.8
TRIM3-209ENST00000529529 DAGLAQ9Y4D2 1042 aa20.06■□□□□ 0.8
TRIM3-209ENST00000529529 GNAI2P04899 355 aa20.05■□□□□ 0.8
TRIM3-209ENST00000529529 HNRNPUQ00839 825 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRIM3-209ENST00000529529 CDC42EP5Q6NZY7 148 aa20.05■□□□□ 0.8
TRIM3-209ENST00000529529 MIGA2Q7L4E1 593 aa20.05■□□□□ 0.8
TRIM3-209ENST00000529529 FAM151AQ8WW52 585 aa20.05■□□□□ 0.8
TRIM3-209ENST00000529529 MS4A4AQ96JQ5 239 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms