RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 GRIK4Q16099 956 aa8.3□□□□□ -1.08
NUP98-216ENST00000529379 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
NUP98-216ENST00000529379 DCAF5Q96JK2 942 aa8.3□□□□□ -1.08
NUP98-216ENST00000529379 TRIM56Q9BRZ2 755 aaKnown RBP8.3□□□□□ -1.08
NUP98-216ENST00000529379 CEP44Q9C0F1 390 aa8.3□□□□□ -1.08
NUP98-216ENST00000529379 E9PSI1 815 aa8.29□□□□□ -1.08
NUP98-216ENST00000529379 PAGE1O75459 146 aa8.29□□□□□ -1.08
NUP98-216ENST00000529379 ELNP15502 786 aa8.29□□□□□ -1.08
NUP98-216ENST00000529379 CD68P34810 354 aaPredicted RBP8.29□□□□□ -1.08
NUP98-216ENST00000529379 CCDC85BQ15834 202 aaPredicted RBP8.29□□□□□ -1.08
NUP98-216ENST00000529379 SV2BQ7L1I2 683 aa8.29□□□□□ -1.08
NUP98-216ENST00000529379 NRSN2Q9GZP1 204 aa8.29□□□□□ -1.08
NUP98-216ENST00000529379 SPATA31C1P0DKV0 1188 aa8.28□□□□□ -1.08
NUP98-216ENST00000529379 NLRP12P59046 1061 aa8.28□□□□□ -1.08
NUP98-216ENST00000529379 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
NUP98-216ENST00000529379 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
NUP98-216ENST00000529379 STK35Q8TDR2 534 aa8.28□□□□□ -1.08
NUP98-216ENST00000529379 ECEL1O95672 775 aa8.27□□□□□ -1.09
NUP98-216ENST00000529379 NPM2Q86SE8 214 aaKnown RBP8.27□□□□□ -1.09
NUP98-216ENST00000529379 NOC4LQ9BVI4 516 aaKnown RBP8.27□□□□□ -1.09
NUP98-216ENST00000529379 KRBA1A5PL33 1030 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 SCAMP3O14828 347 aaKnown RBP8.26□□□□□ -1.09
NUP98-216ENST00000529379 WISP1O95388 367 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 CTSBP07858 339 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 SELPP16109 830 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 BMP6P22004 513 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 NME2P22392 152 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 FANCCQ00597 558 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 RASIP1Q5U651 963 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 IGF2-ASQ6U949 168 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 SULF2Q8IWU5 870 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 DDX54Q8TDD1 881 aaKnown RBP8.26□□□□□ -1.09
NUP98-216ENST00000529379 UBASH3BQ8TF42 649 aa8.26□□□□□ -1.09
NUP98-216ENST00000529379 AP3B2Q13367 1082 aa8.25□□□□□ -1.09
NUP98-216ENST00000529379 POU4F3Q15319 338 aa8.25□□□□□ -1.09
NUP98-216ENST00000529379 MAP3K11Q16584 847 aa8.25□□□□□ -1.09
NUP98-216ENST00000529379 PDZD3Q86UT5 571 aa8.25□□□□□ -1.09
NUP98-216ENST00000529379 DCAF11Q8TEB1 546 aa8.25□□□□□ -1.09
NUP98-216ENST00000529379 LOC100289279A0A1B0GTE1 492 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 DLGAP3O95886 979 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 CYP11A1P05108 521 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 MAOBP27338 520 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 ARNTP27540 789 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 ZNF76P36508 570 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 DUOXA2Q1HG44 320 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 PCNX4Q63HM2 1172 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 USP26Q9BXU7 913 aa8.24□□□□□ -1.09
NUP98-216ENST00000529379 METTL5Q9NRN9 209 aaKnown RBP8.24□□□□□ -1.09
NUP98-216ENST00000529379 F6X3S4 739 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 LIG3P49916 1009 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 HDLBPQ00341 1268 aaKnown RBP8.23□□□□□ -1.09
NUP98-216ENST00000529379 PLA2G4EQ3MJ16 856 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 TTBK2Q6IQ55 1244 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 ERMP1Q7Z2K6 904 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 ALYREFQ86V81 257 aaKnown RBP8.23□□□□□ -1.09
NUP98-216ENST00000529379 GRIN3AQ8TCU5 1115 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 RNF34Q969K3 372 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 CORO1BQ9BR76 489 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 ZC3H12CQ9C0D7 883 aaKnown RBP8.23□□□□□ -1.09
NUP98-216ENST00000529379 MRPL18Q9H0U6 180 aaKnown RBP8.23□□□□□ -1.09
NUP98-216ENST00000529379 IGSF5Q9NSI5 407 aa8.23□□□□□ -1.09
NUP98-216ENST00000529379 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
NUP98-216ENST00000529379 GSTP1P09211 210 aaKnown RBP8.22□□□□□ -1.09
NUP98-216ENST00000529379 ZNF252P-AS1Q0IIN9 211 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 C9orf131Q5VYM1 1079 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 KIAA1211Q6ZU35 1233 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 ACAD11Q709F0 780 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 HS2ST1Q7LGA3 356 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.22□□□□□ -1.09
NUP98-216ENST00000529379 METTL16Q86W50 562 aaKnown RBP8.22□□□□□ -1.09
NUP98-216ENST00000529379 LENG1Q96BZ8 264 aaPredicted RBP8.22□□□□□ -1.09
NUP98-216ENST00000529379 RSRP1Q9BUV0 290 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 EMILIN2Q9BXX0 1053 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 CBX8Q9HC52 389 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 COPRSQ9NQ92 184 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 GGT7Q9UJ14 662 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 TLR6Q9Y2C9 796 aa8.22□□□□□ -1.09
NUP98-216ENST00000529379 APBA3O96018 575 aa8.21□□□□□ -1.1
NUP98-216ENST00000529379 TCF3P15923 654 aa8.21□□□□□ -1.1
NUP98-216ENST00000529379 MPRIPQ6WCQ1 1025 aa8.21□□□□□ -1.1
NUP98-216ENST00000529379 CCDC86Q9H6F5 360 aaKnown RBP8.21□□□□□ -1.1
NUP98-216ENST00000529379 SAMM50Q9Y512 469 aa8.21□□□□□ -1.1
NUP98-216ENST00000529379 C9orf172C9J069 976 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 F8W735 103 aaPredicted RBP8.2□□□□□ -1.1
NUP98-216ENST00000529379 ALX3O95076 343 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 RLBP1P12271 317 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 MAP1SQ66K74 1059 aaPredicted RBP8.2□□□□□ -1.1
NUP98-216ENST00000529379 GPAT2Q6NUI2 795 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 AGMOQ6ZNB7 445 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 AGGF1Q8N302 714 aaeCLIP8.2□□□□□ -1.19e-10■■□□□ 12.9
NUP98-216ENST00000529379 TMEM130Q8N3G9 435 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 PHC3Q8NDX5 983 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 KCNB2Q92953 911 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 NACC1Q96RE7 527 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 KBTBD4Q9NVX7 518 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 USP21Q9UK80 565 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 CYP8B1Q9UNU6 501 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 PCDHB5Q9Y5E4 795 aa8.2□□□□□ -1.1
NUP98-216ENST00000529379 TFE3P19532 575 aaPredicted RBP8.19□□□□□ -1.1
NUP98-216ENST00000529379 CHRNA4P43681 627 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms