RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 FRMD6Q96NE9 622 aa8.02□□□□□ -1.13
CTR9-204ENST00000529355 NOP53Q9NZM5 478 aaKnown RBP8.02□□□□□ -1.13
CTR9-204ENST00000529355 FAM177BA6PVY3 158 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 F6X3S4 739 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 ENC1O14682 589 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 CELA3AP09093 270 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 ELNP15502 786 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 CHRNA4P43681 627 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 C19orf57Q0VDD7 668 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 PRRT3Q5FWE3 981 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 MPRIPQ6WCQ1 1025 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 AGGF1Q8N302 714 aaeCLIP8.01□□□□□ -1.13
CTR9-204ENST00000529355 DTWD1Q8N5C7 304 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 MRRFQ96E11 262 aaKnown RBP8.01□□□□□ -1.13
CTR9-204ENST00000529355 SRCIN1Q9C0H9 1055 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 NRSN2Q9GZP1 204 aa8.01□□□□□ -1.13
CTR9-204ENST00000529355 GPN3Q9UHW5 284 aaPredicted RBP8.01□□□□□ -1.13
CTR9-204ENST00000529355 SPATA31C1P0DKV0 1188 aa8□□□□□ -1.13
CTR9-204ENST00000529355 RBM25P49756 843 aaKnown RBP8□□□□□ -1.13
CTR9-204ENST00000529355 FAM117BQ6P1L5 589 aa8□□□□□ -1.13
CTR9-204ENST00000529355 BACH2Q9BYV9 841 aa8□□□□□ -1.13
CTR9-204ENST00000529355 ZC3H12CQ9C0D7 883 aaKnown RBP8□□□□□ -1.13
CTR9-204ENST00000529355 MRS2Q9HD23 443 aa8□□□□□ -1.13
CTR9-204ENST00000529355 TTF2Q9UNY4 1162 aaKnown RBP8□□□□□ -1.13
CTR9-204ENST00000529355 SPDYE3A6NKU9 549 aa7.99□□□□□ -1.13
CTR9-204ENST00000529355 PIK3R2O00459 728 aa7.99□□□□□ -1.13
CTR9-204ENST00000529355 FGD1P98174 961 aa7.99□□□□□ -1.13
CTR9-204ENST00000529355 CD163Q86VB7 1156 aa7.99□□□□□ -1.13
CTR9-204ENST00000529355 KLHL23Q8NBE8 558 aa7.99□□□□□ -1.13
CTR9-204ENST00000529355 GRIN3AQ8TCU5 1115 aa7.99□□□□□ -1.13
CTR9-204ENST00000529355 NECAB3Q96P71 396 aaPredicted RBP7.99□□□□□ -1.13
CTR9-204ENST00000529355 OSGEPQ9NPF4 335 aa7.99□□□□□ -1.13
CTR9-204ENST00000529355 C1QTNF9BB2RNN3 333 aa7.98□□□□□ -1.13
CTR9-204ENST00000529355 XRCC5P13010 732 aaKnown RBP7.98□□□□□ -1.13
CTR9-204ENST00000529355 MAP3K11Q16584 847 aa7.98□□□□□ -1.13
CTR9-204ENST00000529355 RPS26P11Q5JNZ5 115 aaPredicted RBP7.98□□□□□ -1.13
CTR9-204ENST00000529355 KIAA1211Q6ZU35 1233 aa7.98□□□□□ -1.13
CTR9-204ENST00000529355 WNT8BQ93098 351 aa7.98□□□□□ -1.13
CTR9-204ENST00000529355 USP26Q9BXU7 913 aa7.98□□□□□ -1.13
CTR9-204ENST00000529355 RECKO95980 971 aa7.97□□□□□ -1.13
CTR9-204ENST00000529355 MAOBP27338 520 aa7.97□□□□□ -1.13
CTR9-204ENST00000529355 TSNAXIP1Q2TAA8 658 aa7.97□□□□□ -1.13
CTR9-204ENST00000529355 IGF2-ASQ6U949 168 aa7.97□□□□□ -1.13
CTR9-204ENST00000529355 SOX17Q9H6I2 414 aaPredicted RBP7.97□□□□□ -1.13
CTR9-204ENST00000529355 GOLGA2P5Q9HBQ8 144 aa7.97□□□□□ -1.13
CTR9-204ENST00000529355 TMEM39AQ9NV64 488 aa7.97□□□□□ -1.13
CTR9-204ENST00000529355 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
CTR9-204ENST00000529355 LOC100289279A0A1B0GTE1 492 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 BMP6P22004 513 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 ARL4DP49703 201 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 TAF1CQ15572 869 aaPredicted RBP7.96□□□□□ -1.14
CTR9-204ENST00000529355 DUOXA2Q1HG44 320 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 ZMYM1Q5SVZ6 1142 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 ACAD11Q709F0 780 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 MAP4K3Q8IVH8 894 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 LENG1Q96BZ8 264 aaPredicted RBP7.96□□□□□ -1.14
CTR9-204ENST00000529355 WDR89Q96FK6 387 aaPredicted RBP7.96□□□□□ -1.14
CTR9-204ENST00000529355 CRELD1Q96HD1 420 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 USP21Q9UK80 565 aa7.96□□□□□ -1.14
CTR9-204ENST00000529355 NOS3P29474 1203 aa7.95□□□□□ -1.14
CTR9-204ENST00000529355 IREB2P48200 963 aaKnown RBP7.95□□□□□ -1.14
CTR9-204ENST00000529355 CCDC85BQ15834 202 aaPredicted RBP7.95□□□□□ -1.14
CTR9-204ENST00000529355 PDZD3Q86UT5 571 aa7.95□□□□□ -1.14
CTR9-204ENST00000529355 SULF2Q8IWU5 870 aa7.95□□□□□ -1.14
CTR9-204ENST00000529355 TMEM87AQ8NBN3 555 aa7.95□□□□□ -1.14
CTR9-204ENST00000529355 SRA1Q9HD15 236 aaKnown RBP7.95□□□□□ -1.14
CTR9-204ENST00000529355 F8W735 103 aaPredicted RBP7.94□□□□□ -1.14
CTR9-204ENST00000529355 MBTPS1Q14703 1052 aa7.94□□□□□ -1.14
CTR9-204ENST00000529355 POU4F3Q15319 338 aa7.94□□□□□ -1.14
CTR9-204ENST00000529355 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.94□□□□□ -1.14
CTR9-204ENST00000529355 WFDC12Q8WWY7 111 aa7.94□□□□□ -1.14
CTR9-204ENST00000529355 CCDC86Q9H6F5 360 aaKnown RBP7.94□□□□□ -1.14
CTR9-204ENST00000529355 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
CTR9-204ENST00000529355 PPM1HQ9ULR3 514 aa7.94□□□□□ -1.14
CTR9-204ENST00000529355 TLR6Q9Y2C9 796 aa7.94□□□□□ -1.14
CTR9-204ENST00000529355 APBA3O96018 575 aa7.93□□□□□ -1.14
CTR9-204ENST00000529355 LIG1P18858 919 aa7.93□□□□□ -1.14
CTR9-204ENST00000529355 PTPN11Q06124 597 aaPredicted RBP7.93□□□□□ -1.14
CTR9-204ENST00000529355 ADGRE1Q14246 886 aa7.93□□□□□ -1.14
CTR9-204ENST00000529355 ZNF862O60290 1169 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 NME2P22392 152 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 ARNTP27540 789 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 C9orf131Q5VYM1 1079 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 PCNX4Q63HM2 1172 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 ANKRD24Q8TF21 1146 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 UBL7Q96S82 380 aaPredicted RBP7.92□□□□□ -1.14
CTR9-204ENST00000529355 KRTAP4-7Q9BYR0 210 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 MRPL18Q9H0U6 180 aaKnown RBP7.92□□□□□ -1.14
CTR9-204ENST00000529355 ZFYVE1Q9HBF4 777 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 CBX8Q9HC52 389 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 PCDHB5Q9Y5E4 795 aa7.92□□□□□ -1.14
CTR9-204ENST00000529355 C9orf172C9J069 976 aa7.91□□□□□ -1.14
CTR9-204ENST00000529355 GSTP1P09211 210 aaKnown RBP7.91□□□□□ -1.14
CTR9-204ENST00000529355 DRD2P14416 443 aa7.91□□□□□ -1.14
CTR9-204ENST00000529355 NRG1Q02297 640 aaPredicted RBP7.91□□□□□ -1.14
CTR9-204ENST00000529355 PPP2R3AQ06190 1150 aa7.91□□□□□ -1.14
CTR9-204ENST00000529355 ZNF252P-AS1Q0IIN9 211 aa7.91□□□□□ -1.14
CTR9-204ENST00000529355 MAP1SQ66K74 1059 aaPredicted RBP7.91□□□□□ -1.14
CTR9-204ENST00000529355 SV2BQ7L1I2 683 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms