RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 RBBP6Q7Z6E9 1792 aaKnown RBP17.09■□□□□ 0.33
HIF3A-212ENST00000529205 GRM8O00222 908 aa17.08■□□□□ 0.32
HIF3A-212ENST00000529205 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.32
HIF3A-212ENST00000529205 GNRH1P01148 92 aa17.08■□□□□ 0.32
HIF3A-212ENST00000529205 CETPP11597 493 aa17.08■□□□□ 0.32
HIF3A-212ENST00000529205 CRKP46108 304 aa17.08■□□□□ 0.32
HIF3A-212ENST00000529205 VGLL4Q14135 290 aa17.08■□□□□ 0.32
HIF3A-212ENST00000529205 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
HIF3A-212ENST00000529205 BEND3Q5T5X7 828 aa17.08■□□□□ 0.32
HIF3A-212ENST00000529205 BRI3BPQ8WY22 251 aa17.08■□□□□ 0.32
HIF3A-212ENST00000529205 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.32
HIF3A-212ENST00000529205 AOX1Q06278 1338 aa17.07■□□□□ 0.32
HIF3A-212ENST00000529205 VAMP4O75379 141 aa17.07■□□□□ 0.32
HIF3A-212ENST00000529205 GYG1P46976 350 aa17.07■□□□□ 0.32
HIF3A-212ENST00000529205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.07■□□□□ 0.32
HIF3A-212ENST00000529205 TEPSINQ96N21 525 aa17.07■□□□□ 0.32
HIF3A-212ENST00000529205 TMEM39BQ9GZU3 492 aa17.07■□□□□ 0.32
HIF3A-212ENST00000529205 ZCCHC17Q9NP64 241 aaKnown RBP17.07■□□□□ 0.32
HIF3A-212ENST00000529205 FANCIQ9NVI1 1328 aa17.06■□□□□ 0.32
HIF3A-212ENST00000529205 F6X3S4 739 aa17.06■□□□□ 0.32
HIF3A-212ENST00000529205 TLR2O60603 784 aa17.06■□□□□ 0.32
HIF3A-212ENST00000529205 FXR1P51114 621 aaKnown RBP eCLIP17.06■□□□□ 0.32
HIF3A-212ENST00000529205 PRMT2P55345 433 aa17.06■□□□□ 0.32
HIF3A-212ENST00000529205 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
HIF3A-212ENST00000529205 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
HIF3A-212ENST00000529205 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
HIF3A-212ENST00000529205 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
HIF3A-212ENST00000529205 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-212ENST00000529205 MROH5Q6ZUA9 1318 aa17.05■□□□□ 0.32
HIF3A-212ENST00000529205 SPDYE5A6NIY4 337 aa17.05■□□□□ 0.32
HIF3A-212ENST00000529205 HDLBPQ00341 1268 aaKnown RBP17.05■□□□□ 0.32
HIF3A-212ENST00000529205 SNAPC2Q13487 334 aa17.05■□□□□ 0.32
HIF3A-212ENST00000529205 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
HIF3A-212ENST00000529205 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
HIF3A-212ENST00000529205 COLQQ9Y215 455 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-212ENST00000529205 MYCP01106 439 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-212ENST00000529205 LACTBP83111 547 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-212ENST00000529205 EPHA10Q5JZY3 1008 aa17.04■□□□□ 0.32
HIF3A-212ENST00000529205 WDR63Q8IWG1 891 aa17.04■□□□□ 0.32
HIF3A-212ENST00000529205 ALDH1L1O75891 902 aa17.03■□□□□ 0.32
HIF3A-212ENST00000529205 HOXD10P28358 340 aa17.03■□□□□ 0.32
HIF3A-212ENST00000529205 CAP1Q01518 475 aa17.03■□□□□ 0.32
HIF3A-212ENST00000529205 EXOSC9Q06265 439 aaKnown RBP17.03■□□□□ 0.32
HIF3A-212ENST00000529205 CHAF1AQ13111 956 aaPredicted RBP17.03■□□□□ 0.32
HIF3A-212ENST00000529205 DCAF15Q66K64 600 aa17.03■□□□□ 0.32
HIF3A-212ENST00000529205 SLC4A10Q6U841 1118 aa17.03■□□□□ 0.32
HIF3A-212ENST00000529205 WRNIP1Q96S55 665 aa17.03■□□□□ 0.32
HIF3A-212ENST00000529205 SRCIN1Q9C0H9 1055 aa17.03■□□□□ 0.32
HIF3A-212ENST00000529205 MAST3O60307 1309 aa17.02■□□□□ 0.32
HIF3A-212ENST00000529205 FAM83AQ86UY5 434 aa17.02■□□□□ 0.32
HIF3A-212ENST00000529205 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.32
HIF3A-212ENST00000529205 NKX2-3Q8TAU0 364 aa17.02■□□□□ 0.32
HIF3A-212ENST00000529205 SH3TC2Q8TF17 1288 aa17.02■□□□□ 0.32
HIF3A-212ENST00000529205 MRIQ9BWK5 157 aa17.02■□□□□ 0.32
HIF3A-212ENST00000529205 CACNA1FO60840 1977 aa17.02■□□□□ 0.31
HIF3A-212ENST00000529205 A0A1B0GUL6 1792 aa17.02■□□□□ 0.31
HIF3A-212ENST00000529205 BTBD19C9JJ37 291 aa17.01■□□□□ 0.31
HIF3A-212ENST00000529205 SNCAIPQ9Y6H5 919 aa17.01■□□□□ 0.31
HIF3A-212ENST00000529205 OTOFQ9HC10 1997 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 H0YGN5 161 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 IRF6O14896 467 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 PPATQ06203 517 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 PPIL2Q13356 520 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 METTL24Q5JXM2 366 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 FKBP1CQ5VVH2 108 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 FBXO33Q7Z6M2 555 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 DPF3Q92784 378 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 ZKSCAN4Q969J2 545 aaPredicted RBP17■□□□□ 0.31
HIF3A-212ENST00000529205 ZDHHC15Q96MV8 337 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 ZNF341Q9BYN7 854 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 PUS3Q9BZE2 481 aaKnown RBP17■□□□□ 0.31
HIF3A-212ENST00000529205 IQSEC3Q9UPP2 1182 aaPredicted RBP17■□□□□ 0.31
HIF3A-212ENST00000529205 SUGT1Q9Y2Z0 365 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 SALL2Q9Y467 1007 aaPredicted RBP17■□□□□ 0.31
HIF3A-212ENST00000529205 RIPOR2Q9Y4F9 1068 aa17■□□□□ 0.31
HIF3A-212ENST00000529205 CACNB3P54284 484 aa16.99■□□□□ 0.31
HIF3A-212ENST00000529205 RAET1EQ8TD07 263 aa16.99■□□□□ 0.31
HIF3A-212ENST00000529205 ARHGAP39Q9C0H5 1083 aa16.99■□□□□ 0.31
HIF3A-212ENST00000529205 FMNL1O95466 1100 aaPredicted RBP16.98■□□□□ 0.31
HIF3A-212ENST00000529205 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
HIF3A-212ENST00000529205 HTATIP2Q9BUP3 242 aa16.98■□□□□ 0.31
HIF3A-212ENST00000529205 ARAP2Q8WZ64 1704 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 PDE8BO95263 885 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
HIF3A-212ENST00000529205 PSMC4P43686 418 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 GRIK5Q16478 980 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 HHIPL2Q6UWX4 724 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 C17orf99Q6UX52 265 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 ANKRD23Q86SG2 305 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 TRIM47Q96LD4 638 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 BIN2Q9UBW5 565 aaPredicted RBP16.97■□□□□ 0.31
HIF3A-212ENST00000529205 SRRDQ9UH36 339 aa16.97■□□□□ 0.31
HIF3A-212ENST00000529205 ECM2O94769 699 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-212ENST00000529205 IFIT1P09914 478 aaKnown RBP16.96■□□□□ 0.31
HIF3A-212ENST00000529205 GRK4P32298 578 aa16.96■□□□□ 0.31
HIF3A-212ENST00000529205 UBXN2AP68543 259 aa16.96■□□□□ 0.31
HIF3A-212ENST00000529205 CCDC184Q52MB2 194 aa16.96■□□□□ 0.31
HIF3A-212ENST00000529205 CHRDL2Q6WN34 429 aa16.96■□□□□ 0.31
HIF3A-212ENST00000529205 MIGA2Q7L4E1 593 aa16.96■□□□□ 0.31
HIF3A-212ENST00000529205 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms