RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 SSH1Q8WYL5 1049 aa19.6■□□□□ 0.73
CTSB-215ENST00000528965 TDRD3Q9H7E2 651 aaKnown RBP19.6■□□□□ 0.73
CTSB-215ENST00000528965 LAMB1P07942 1786 aa19.6■□□□□ 0.73
CTSB-215ENST00000528965 KIF16BQ96L93 1317 aa19.59■□□□□ 0.73
CTSB-215ENST00000528965 HDLBPQ00341 1268 aaKnown RBP19.59■□□□□ 0.73
CTSB-215ENST00000528965 PUM3Q15397 648 aaKnown RBP19.59■□□□□ 0.73
CTSB-215ENST00000528965 ALDH1L2Q3SY69 923 aa19.59■□□□□ 0.73
CTSB-215ENST00000528965 LRRC24Q50LG9 513 aa19.59■□□□□ 0.73
CTSB-215ENST00000528965 TEKT1Q969V4 418 aa19.59■□□□□ 0.73
CTSB-215ENST00000528965 TMOD2Q9NZR1 351 aa19.59■□□□□ 0.73
CTSB-215ENST00000528965 USP2O75604 605 aaPredicted RBP19.58■□□□□ 0.72
CTSB-215ENST00000528965 IFIT1P09914 478 aaKnown RBP19.58■□□□□ 0.72
CTSB-215ENST00000528965 IQSEC3Q9UPP2 1182 aaPredicted RBP19.58■□□□□ 0.72
CTSB-215ENST00000528965 TCP10L2B9ZVM9 353 aa19.57■□□□□ 0.72
CTSB-215ENST00000528965 IGF2BP3O00425 579 aaKnown RBP eCLIP19.57■□□□□ 0.72
CTSB-215ENST00000528965 VGLL2Q8N8G2 317 aa19.57■□□□□ 0.72
CTSB-215ENST00000528965 USP44Q9H0E7 712 aa19.57■□□□□ 0.72
CTSB-215ENST00000528965 SMC4Q9NTJ3 1288 aa19.57■□□□□ 0.72
CTSB-215ENST00000528965 SUGT1Q9Y2Z0 365 aa19.57■□□□□ 0.72
CTSB-215ENST00000528965 SLFN5Q08AF3 891 aa19.56■□□□□ 0.72
CTSB-215ENST00000528965 HOOK2Q96ED9 719 aa19.56■□□□□ 0.72
CTSB-215ENST00000528965 ERO1AQ96HE7 468 aa19.56■□□□□ 0.72
CTSB-215ENST00000528965 ELP3Q9H9T3 547 aa19.56■□□□□ 0.72
CTSB-215ENST00000528965 CSADQ9Y600 493 aa19.56■□□□□ 0.72
CTSB-215ENST00000528965 PDE4DIPQ5VU43 2346 aa19.56■□□□□ 0.72
CTSB-215ENST00000528965 SLC5A1P13866 664 aa19.55■□□□□ 0.72
CTSB-215ENST00000528965 OPTNQ96CV9 577 aa19.55■□□□□ 0.72
CTSB-215ENST00000528965 TMEM39BQ9GZU3 492 aa19.55■□□□□ 0.72
CTSB-215ENST00000528965 R3HDMLQ9H3Y0 253 aa19.55■□□□□ 0.72
CTSB-215ENST00000528965 OTOFQ9HC10 1997 aa19.55■□□□□ 0.72
CTSB-215ENST00000528965 EYA2O00167 538 aa19.54■□□□□ 0.72
CTSB-215ENST00000528965 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
CTSB-215ENST00000528965 KLHDC4Q8TBB5 520 aa19.54■□□□□ 0.72
CTSB-215ENST00000528965 ZDHHC15Q96MV8 337 aa19.54■□□□□ 0.72
CTSB-215ENST00000528965 TEPSINQ96N21 525 aa19.54■□□□□ 0.72
CTSB-215ENST00000528965 MRIQ9BWK5 157 aa19.54■□□□□ 0.72
CTSB-215ENST00000528965 HDAC5Q9UQL6 1122 aa19.54■□□□□ 0.72
CTSB-215ENST00000528965 TRIM17Q9Y577 477 aa19.54■□□□□ 0.72
CTSB-215ENST00000528965 TESPA1A2RU30 521 aaPredicted RBP19.53■□□□□ 0.72
CTSB-215ENST00000528965 UBTFL1P0CB47 393 aaPredicted RBP19.53■□□□□ 0.72
CTSB-215ENST00000528965 GJA5P36382 358 aa19.53■□□□□ 0.72
CTSB-215ENST00000528965 BCAMP50895 628 aa19.53■□□□□ 0.72
CTSB-215ENST00000528965 MAP3K9P80192 1104 aa19.53■□□□□ 0.72
CTSB-215ENST00000528965 CRHR2Q13324 411 aa19.53■□□□□ 0.72
CTSB-215ENST00000528965 LPIN2Q92539 896 aa19.53■□□□□ 0.72
CTSB-215ENST00000528965 WDHD1O75717 1129 aaPredicted RBP19.52■□□□□ 0.72
CTSB-215ENST00000528965 FGFR2P21802 821 aa19.52■□□□□ 0.72
CTSB-215ENST00000528965 GTF2A2P52657 109 aa19.52■□□□□ 0.72
CTSB-215ENST00000528965 VGLL4Q14135 290 aa19.52■□□□□ 0.72
CTSB-215ENST00000528965 FKBP1CQ5VVH2 108 aa19.52■□□□□ 0.72
CTSB-215ENST00000528965 FAM83AQ86UY5 434 aa19.52■□□□□ 0.72
CTSB-215ENST00000528965 WDR66Q8TBY9 1149 aa19.52■□□□□ 0.72
CTSB-215ENST00000528965 FBXO3Q9UK99 471 aa19.52■□□□□ 0.72
CTSB-215ENST00000528965 RPAP1Q9BWH6 1393 aaPredicted RBP19.52■□□□□ 0.72
CTSB-215ENST00000528965 GRIK5Q16478 980 aa19.51■□□□□ 0.71
CTSB-215ENST00000528965 DCAF15Q66K64 600 aa19.51■□□□□ 0.71
CTSB-215ENST00000528965 HHIPL2Q6UWX4 724 aa19.51■□□□□ 0.71
CTSB-215ENST00000528965 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.51■□□□□ 0.71
CTSB-215ENST00000528965 OTOP1Q7RTM1 612 aa19.51■□□□□ 0.71
CTSB-215ENST00000528965 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.51■□□□□ 0.71
CTSB-215ENST00000528965 CCL15-CCL14A0A0B4J2E2 113 aa19.5■□□□□ 0.71
CTSB-215ENST00000528965 RFX5P48382 616 aaPredicted RBP19.5■□□□□ 0.71
CTSB-215ENST00000528965 ARHGEF6Q15052 776 aa19.5■□□□□ 0.71
CTSB-215ENST00000528965 CCL15Q16663 113 aa19.5■□□□□ 0.71
CTSB-215ENST00000528965 INTS3Q68E01 1043 aaKnown RBP19.5■□□□□ 0.71
CTSB-215ENST00000528965 CDAN1Q8IWY9 1227 aa19.5■□□□□ 0.71
CTSB-215ENST00000528965 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
CTSB-215ENST00000528965 GNL3LQ9NVN8 582 aaKnown RBP19.5■□□□□ 0.71
CTSB-215ENST00000528965 CIAO1O76071 339 aa19.49■□□□□ 0.71
CTSB-215ENST00000528965 CACNB3P54284 484 aa19.49■□□□□ 0.71
CTSB-215ENST00000528965 SP3Q02447 781 aa19.49■□□□□ 0.71
CTSB-215ENST00000528965 TAF1CQ15572 869 aaPredicted RBP19.49■□□□□ 0.71
CTSB-215ENST00000528965 PRPF38BQ5VTL8 546 aaKnown RBP19.49■□□□□ 0.71
CTSB-215ENST00000528965 OTUD5Q96G74 571 aa19.49■□□□□ 0.71
CTSB-215ENST00000528965 ZFYVE28Q9HCC9 887 aa19.49■□□□□ 0.71
CTSB-215ENST00000528965 SPDYE5A6NIY4 337 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 ATP2B3Q16720 1220 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 CD99L2Q8TCZ2 262 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 BRI3BPQ8WY22 251 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 MS4A4AQ96JQ5 239 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 WRNIP1Q96S55 665 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 PTPN18Q99952 460 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 EFCC1Q9HA90 598 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 CEP126Q9P2H0 1117 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 MYH13Q9UKX3 1938 aa19.48■□□□□ 0.71
CTSB-215ENST00000528965 CETPP11597 493 aa19.47■□□□□ 0.71
CTSB-215ENST00000528965 APOBEC3HQ6NTF7 200 aaKnown RBP19.47■□□□□ 0.71
CTSB-215ENST00000528965 ERO1BQ86YB8 467 aa19.47■□□□□ 0.71
CTSB-215ENST00000528965 CDCA7LQ96GN5 454 aa19.47■□□□□ 0.71
CTSB-215ENST00000528965 SIL1Q9H173 461 aa19.47■□□□□ 0.71
CTSB-215ENST00000528965 PCDH10Q9P2E7 1040 aa19.47■□□□□ 0.71
CTSB-215ENST00000528965 SEMA3EO15041 775 aa19.46■□□□□ 0.71
CTSB-215ENST00000528965 ATG9AQ7Z3C6 839 aa19.46■□□□□ 0.71
CTSB-215ENST00000528965 CNKSR2Q8WXI2 1034 aa19.46■□□□□ 0.71
CTSB-215ENST00000528965 ZNF341Q9BYN7 854 aa19.46■□□□□ 0.71
CTSB-215ENST00000528965 PTPN22Q9Y2R2 807 aa19.46■□□□□ 0.71
CTSB-215ENST00000528965 IL15P40933 162 aaPredicted RBP19.45■□□□□ 0.7
CTSB-215ENST00000528965 SNAPC2Q13487 334 aa19.45■□□□□ 0.7
CTSB-215ENST00000528965 TRMT2AQ8IZ69 625 aaKnown RBP19.45■□□□□ 0.7
CTSB-215ENST00000528965 ZCCHC17Q9NP64 241 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms