RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 PHKA1P46020 1223 aa17.66■□□□□ 0.42
CAPN1-216ENST00000528739 CTCFP49711 727 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-216ENST00000528739 FKBP1BP68106 108 aa17.66■□□□□ 0.42
CAPN1-216ENST00000528739 NOGQ13253 232 aa17.66■□□□□ 0.42
CAPN1-216ENST00000528739 ARMC9Q7Z3E5 817 aa17.66■□□□□ 0.42
CAPN1-216ENST00000528739 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
CAPN1-216ENST00000528739 DENND2AQ9ULE3 1009 aa17.66■□□□□ 0.42
CAPN1-216ENST00000528739 TCP10L2B9ZVM9 353 aa17.65■□□□□ 0.42
CAPN1-216ENST00000528739 COL13A1Q5TAT6 717 aaPredicted RBP17.65■□□□□ 0.42
CAPN1-216ENST00000528739 CCDC102BQ68D86 513 aa17.65■□□□□ 0.42
CAPN1-216ENST00000528739 XAGE2Q96GT9 111 aa17.65■□□□□ 0.42
CAPN1-216ENST00000528739 ZNF70Q9UC06 446 aaPredicted RBP17.65■□□□□ 0.42
CAPN1-216ENST00000528739 MAST3O60307 1309 aa17.65■□□□□ 0.42
CAPN1-216ENST00000528739 LDHBP07195 334 aaKnown RBP17.64■□□□□ 0.41
CAPN1-216ENST00000528739 TNFAIP1Q13829 316 aa17.64■□□□□ 0.41
CAPN1-216ENST00000528739 MVPQ14764 893 aaKnown RBP17.64■□□□□ 0.41
CAPN1-216ENST00000528739 SUPT20HL1Q3ZLR7 823 aa17.64■□□□□ 0.41
CAPN1-216ENST00000528739 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-216ENST00000528739 TMOD2Q9NZR1 351 aa17.64■□□□□ 0.41
CAPN1-216ENST00000528739 ANGEL1Q9UNK9 670 aaKnown RBP17.64■□□□□ 0.41
CAPN1-216ENST00000528739 COG6Q9Y2V7 657 aa17.64■□□□□ 0.41
CAPN1-216ENST00000528739 PPP2R3BQ9Y5P8 575 aa17.64■□□□□ 0.41
CAPN1-216ENST00000528739 PPP1R12BO60237 982 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-216ENST00000528739 TNNI2P48788 182 aa17.63■□□□□ 0.41
CAPN1-216ENST00000528739 LBX1P52954 281 aa17.63■□□□□ 0.41
CAPN1-216ENST00000528739 RASA3Q14644 834 aa17.63■□□□□ 0.41
CAPN1-216ENST00000528739 ABCF2Q9UG63 623 aa17.63■□□□□ 0.41
CAPN1-216ENST00000528739 SUGT1Q9Y2Z0 365 aa17.63■□□□□ 0.41
CAPN1-216ENST00000528739 AOX1Q06278 1338 aa17.63■□□□□ 0.41
CAPN1-216ENST00000528739 SEMA3EO15041 775 aa17.62■□□□□ 0.41
CAPN1-216ENST00000528739 HDLBPQ00341 1268 aaKnown RBP17.62■□□□□ 0.41
CAPN1-216ENST00000528739 KIF23Q02241 960 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-216ENST00000528739 MKRN3Q13064 507 aaKnown RBP17.62■□□□□ 0.41
CAPN1-216ENST00000528739 SPDYE2Q495Y8 402 aa17.62■□□□□ 0.41
CAPN1-216ENST00000528739 ZGPATQ8N5A5 531 aaKnown RBP17.62■□□□□ 0.41
CAPN1-216ENST00000528739 ZIC5Q96T25 663 aa17.62■□□□□ 0.41
CAPN1-216ENST00000528739 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
CAPN1-216ENST00000528739 TSKSQ9UJT2 592 aa17.62■□□□□ 0.41
CAPN1-216ENST00000528739 FZD1Q9UP38 647 aa17.62■□□□□ 0.41
CAPN1-216ENST00000528739 CACNB3P54284 484 aa17.61■□□□□ 0.41
CAPN1-216ENST00000528739 POLA2Q14181 598 aa17.61■□□□□ 0.41
CAPN1-216ENST00000528739 NBPF12Q5TAG4 269 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-216ENST00000528739 TNS4Q8IZW8 715 aa17.61■□□□□ 0.41
CAPN1-216ENST00000528739 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
CAPN1-216ENST00000528739 DDX19BQ9UMR2 479 aa17.61■□□□□ 0.41
CAPN1-216ENST00000528739 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-216ENST00000528739 FAM155AB1AL88 458 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-216ENST00000528739 SLC10A3P09131 477 aa17.6■□□□□ 0.41
CAPN1-216ENST00000528739 PRDX5P30044 214 aa17.6■□□□□ 0.41
CAPN1-216ENST00000528739 DZIP1Q86YF9 867 aaKnown RBP17.6■□□□□ 0.41
CAPN1-216ENST00000528739 RASAL3Q86YV0 1011 aa17.6■□□□□ 0.41
CAPN1-216ENST00000528739 ZDHHC15Q96MV8 337 aa17.6■□□□□ 0.41
CAPN1-216ENST00000528739 CHMP4BQ9H444 224 aaKnown RBP17.6■□□□□ 0.41
CAPN1-216ENST00000528739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-216ENST00000528739 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
CAPN1-216ENST00000528739 DIXDC1Q155Q3 683 aa17.59■□□□□ 0.41
CAPN1-216ENST00000528739 TTC39AQ5SRH9 613 aa17.59■□□□□ 0.41
CAPN1-216ENST00000528739 CEP85Q6P2H3 762 aa17.59■□□□□ 0.41
CAPN1-216ENST00000528739 HHIPL2Q6UWX4 724 aa17.59■□□□□ 0.41
CAPN1-216ENST00000528739 SLC10A4Q96EP9 437 aa17.59■□□□□ 0.41
CAPN1-216ENST00000528739 MRIQ9BWK5 157 aa17.59■□□□□ 0.41
CAPN1-216ENST00000528739 COL1A1P02452 1464 aaPredicted RBP17.58■□□□□ 0.41
CAPN1-216ENST00000528739 HSPA8P11142 646 aaKnown RBP17.58■□□□□ 0.4
CAPN1-216ENST00000528739 IREB2P48200 963 aaKnown RBP17.58■□□□□ 0.4
CAPN1-216ENST00000528739 TNNI3KQ59H18 835 aa17.58■□□□□ 0.4
CAPN1-216ENST00000528739 CCDC158Q5M9N0 1113 aa17.58■□□□□ 0.4
CAPN1-216ENST00000528739 SPTY2D1Q68D10 685 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-216ENST00000528739 TMEM39BQ9GZU3 492 aa17.58■□□□□ 0.4
CAPN1-216ENST00000528739 FPGT-TNNI3KV9GXZ4 949 aa17.58■□□□□ 0.4
CAPN1-216ENST00000528739 APBB1O00213 710 aa17.57■□□□□ 0.4
CAPN1-216ENST00000528739 CA12O43570 354 aa17.57■□□□□ 0.4
CAPN1-216ENST00000528739 UQCRFS1P1P0C7P4 283 aa17.57■□□□□ 0.4
CAPN1-216ENST00000528739 APOBEC3HQ6NTF7 200 aaKnown RBP17.57■□□□□ 0.4
CAPN1-216ENST00000528739 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
CAPN1-216ENST00000528739 SLF2Q8IX21 1173 aa17.57■□□□□ 0.4
CAPN1-216ENST00000528739 PRDM10Q9NQV6 1147 aa17.57■□□□□ 0.4
CAPN1-216ENST00000528739 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
CAPN1-216ENST00000528739 PAPPA2Q9BXP8 1791 aa17.56■□□□□ 0.4
CAPN1-216ENST00000528739 SALL1Q9NSC2 1324 aa17.56■□□□□ 0.4
CAPN1-216ENST00000528739 SPATA5Q8NB90 893 aa17.56■□□□□ 0.4
CAPN1-216ENST00000528739 CCDC8Q9H0W5 538 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-216ENST00000528739 USP40Q9NVE5 1235 aa17.56■□□□□ 0.4
CAPN1-216ENST00000528739 RAI14Q9P0K7 980 aa17.56■□□□□ 0.4
CAPN1-216ENST00000528739 DAGLAQ9Y4D2 1042 aa17.56■□□□□ 0.4
CAPN1-216ENST00000528739 PCNTO95613 3336 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 HMMRO75330 724 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 TRPA1O75762 1119 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 TCP10Q12799 353 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 ERC1Q8IUD2 1116 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 DBNDD2Q9BQY9 259 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 GPR108Q9NPR9 543 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 HMG20BQ9P0W2 317 aa17.55■□□□□ 0.4
CAPN1-216ENST00000528739 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
CAPN1-216ENST00000528739 USP2O75604 605 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-216ENST00000528739 HSP90AB4PQ58FF6 505 aa17.54■□□□□ 0.4
CAPN1-216ENST00000528739 C20orf194Q5TEA3 1177 aa17.54■□□□□ 0.4
CAPN1-216ENST00000528739 IFFO2Q5TF58 517 aa17.54■□□□□ 0.4
CAPN1-216ENST00000528739 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
CAPN1-216ENST00000528739 PI16Q6UXB8 463 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms