RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 MYO1BO43795 1136 aa20.74■□□□□ 0.91
HIF3A-211ENST00000528563 HMMRO75330 724 aa20.74■□□□□ 0.91
HIF3A-211ENST00000528563 VEGFBP49765 207 aa20.74■□□□□ 0.91
HIF3A-211ENST00000528563 GORABQ5T7V8 394 aa20.74■□□□□ 0.91
HIF3A-211ENST00000528563 PRAMEF18Q5VWM3 479 aa20.74■□□□□ 0.91
HIF3A-211ENST00000528563 HSP90AB4PQ58FF6 505 aa20.73■□□□□ 0.91
HIF3A-211ENST00000528563 HHIPL2Q6UWX4 724 aa20.73■□□□□ 0.91
HIF3A-211ENST00000528563 ERC1Q8IUD2 1116 aa20.73■□□□□ 0.91
HIF3A-211ENST00000528563 TEKT1Q969V4 418 aa20.73■□□□□ 0.91
HIF3A-211ENST00000528563 EAF2Q96CJ1 260 aaPredicted RBP20.73■□□□□ 0.91
HIF3A-211ENST00000528563 HHIPL1Q96JK4 782 aa20.73■□□□□ 0.91
HIF3A-211ENST00000528563 GBA2Q9HCG7 927 aaPredicted RBP20.73■□□□□ 0.91
HIF3A-211ENST00000528563 CLRN2A0PK11 232 aa20.72■□□□□ 0.91
HIF3A-211ENST00000528563 MAST3O60307 1309 aa20.72■□□□□ 0.91
HIF3A-211ENST00000528563 ARID4AP29374 1257 aaPredicted RBP20.72■□□□□ 0.91
HIF3A-211ENST00000528563 C2orf69Q8N8R5 385 aa20.72■□□□□ 0.91
HIF3A-211ENST00000528563 ZDHHC15Q96MV8 337 aa20.72■□□□□ 0.91
HIF3A-211ENST00000528563 DBNDD2Q9BQY9 259 aa20.72■□□□□ 0.91
HIF3A-211ENST00000528563 DEFB129Q9H1M3 183 aa20.72■□□□□ 0.91
HIF3A-211ENST00000528563 TDRD3Q9H7E2 651 aaKnown RBP20.72■□□□□ 0.91
HIF3A-211ENST00000528563 HMG20BQ9P0W2 317 aa20.72■□□□□ 0.91
HIF3A-211ENST00000528563 ZNF70Q9UC06 446 aaPredicted RBP20.72■□□□□ 0.91
HIF3A-211ENST00000528563 LDHBP07195 334 aaKnown RBP20.71■□□□□ 0.91
HIF3A-211ENST00000528563 PRDX5P30044 214 aa20.71■□□□□ 0.91
HIF3A-211ENST00000528563 SPDYE2Q495Y8 402 aa20.71■□□□□ 0.91
HIF3A-211ENST00000528563 MYH13Q9UKX3 1938 aa20.71■□□□□ 0.91
HIF3A-211ENST00000528563 UQCRFS1P1P0C7P4 283 aa20.7■□□□□ 0.9
HIF3A-211ENST00000528563 APOBEC3HQ6NTF7 200 aaKnown RBP20.7■□□□□ 0.9
HIF3A-211ENST00000528563 ZGPATQ8N5A5 531 aaKnown RBP20.69■□□□□ 0.9
HIF3A-211ENST00000528563 SPATA5Q8NB90 893 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 RHPN1Q8TCX5 695 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 ZNF512BQ96KM6 892 aaPredicted RBP20.69■□□□□ 0.9
HIF3A-211ENST00000528563 DBNLQ9UJU6 430 aaKnown RBP20.69■□□□□ 0.9
HIF3A-211ENST00000528563 WDR33Q9C0J8 1336 aaKnown RBP20.69■□□□□ 0.9
HIF3A-211ENST00000528563 MCAMP43121 646 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 HUNKP57058 714 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 FKBP1BP68106 108 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 CCDC158Q5M9N0 1113 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 PI16Q6UXB8 463 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 CAPNS2Q96L46 248 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 CCDC8Q9H0W5 538 aaPredicted RBP20.69■□□□□ 0.9
HIF3A-211ENST00000528563 VEZTQ9HBM0 779 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 PPP2R3BQ9Y5P8 575 aa20.69■□□□□ 0.9
HIF3A-211ENST00000528563 ECM29Q5VYK3 1845 aa20.68■□□□□ 0.9
HIF3A-211ENST00000528563 RAB11FIP3O75154 756 aa20.68■□□□□ 0.9
HIF3A-211ENST00000528563 DIXDC1Q155Q3 683 aa20.68■□□□□ 0.9
HIF3A-211ENST00000528563 SPTY2D1Q68D10 685 aaPredicted RBP20.68■□□□□ 0.9
HIF3A-211ENST00000528563 CYP4F22Q6NT55 531 aa20.68■□□□□ 0.9
HIF3A-211ENST00000528563 ECE1P42892 770 aa20.67■□□□□ 0.9
HIF3A-211ENST00000528563 RASA3Q14644 834 aa20.67■□□□□ 0.9
HIF3A-211ENST00000528563 KIF1BPQ96EK5 621 aa20.67■□□□□ 0.9
HIF3A-211ENST00000528563 IL1RAPL2Q9NP60 686 aa20.67■□□□□ 0.9
HIF3A-211ENST00000528563 TLR7Q9NYK1 1049 aaKnown RBP20.67■□□□□ 0.9
HIF3A-211ENST00000528563 ABCF2Q9UG63 623 aa20.67■□□□□ 0.9
HIF3A-211ENST00000528563 DAGLAQ9Y4D2 1042 aa20.67■□□□□ 0.9
HIF3A-211ENST00000528563 NF2P35240 595 aa20.66■□□□□ 0.9
HIF3A-211ENST00000528563 TNFAIP1Q13829 316 aa20.66■□□□□ 0.9
HIF3A-211ENST00000528563 TTC39AQ5SRH9 613 aa20.66■□□□□ 0.9
HIF3A-211ENST00000528563 TBC1D9Q6ZT07 1266 aa20.66■□□□□ 0.9
HIF3A-211ENST00000528563 FAM163AQ96GL9 167 aaPredicted RBP20.66■□□□□ 0.9
HIF3A-211ENST00000528563 FKBP1CQ5VVH2 108 aa20.65■□□□□ 0.9
HIF3A-211ENST00000528563 MOB2Q70IA6 237 aa20.65■□□□□ 0.9
HIF3A-211ENST00000528563 AACSQ86V21 672 aa20.65■□□□□ 0.9
HIF3A-211ENST00000528563 PCNTO95613 3336 aa20.65■□□□□ 0.9
HIF3A-211ENST00000528563 APBB1O00213 710 aa20.64■□□□□ 0.89
HIF3A-211ENST00000528563 RGMBQ6NW40 437 aa20.64■□□□□ 0.89
HIF3A-211ENST00000528563 PAXIP1Q6ZW49 1069 aaPredicted RBP20.64■□□□□ 0.89
HIF3A-211ENST00000528563 ERICH6Q7L0X2 663 aa20.64■□□□□ 0.89
HIF3A-211ENST00000528563 SNRKQ9NRH2 765 aa20.64■□□□□ 0.89
HIF3A-211ENST00000528563 PCDHB15Q9Y5E8 787 aa20.64■□□□□ 0.89
HIF3A-211ENST00000528563 TCP10L2B9ZVM9 353 aa20.63■□□□□ 0.89
HIF3A-211ENST00000528563 UBE2Q2LH0YL09 131 aa20.63■□□□□ 0.89
HIF3A-211ENST00000528563 SUPT20HL1Q3ZLR7 823 aa20.63■□□□□ 0.89
HIF3A-211ENST00000528563 NBPF12Q5TAG4 269 aaPredicted RBP20.63■□□□□ 0.89
HIF3A-211ENST00000528563 CLASRPQ8N2M8 674 aaKnown RBP20.63■□□□□ 0.89
HIF3A-211ENST00000528563 ZNF384Q8TF68 577 aa20.63■□□□□ 0.89
HIF3A-211ENST00000528563 TEPSINQ96N21 525 aa20.63■□□□□ 0.89
HIF3A-211ENST00000528563 CRBNQ96SW2 442 aa20.63■□□□□ 0.89
HIF3A-211ENST00000528563 MAP2K2P36507 400 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 CACNB3P54284 484 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 MECOMQ03112 1051 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 CDC42EP5Q6NZY7 148 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 DCTPP1Q9H773 170 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 GAKO14976 1311 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 AKAP11Q9UKA4 1901 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 FAM155AB1AL88 458 aaPredicted RBP20.62■□□□□ 0.89
HIF3A-211ENST00000528563 CYP2E1P05181 493 aaPredicted RBP20.62■□□□□ 0.89
HIF3A-211ENST00000528563 TNNI2P48788 182 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 GRM1Q13255 1194 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 FAM83AQ86UY5 434 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 DZIP1Q86YF9 867 aaKnown RBP20.62■□□□□ 0.89
HIF3A-211ENST00000528563 SLF2Q8IX21 1173 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 CCDC102AQ96A19 550 aa20.62■□□□□ 0.89
HIF3A-211ENST00000528563 PAPPA2Q9BXP8 1791 aa20.61■□□□□ 0.89
HIF3A-211ENST00000528563 AOC2O75106 756 aa20.61■□□□□ 0.89
HIF3A-211ENST00000528563 ZNF157P51786 506 aaPredicted RBP20.61■□□□□ 0.89
HIF3A-211ENST00000528563 TTLL12Q14166 644 aaPredicted RBP20.61■□□□□ 0.89
HIF3A-211ENST00000528563 LDLRAD1Q5T700 205 aa20.61■□□□□ 0.89
HIF3A-211ENST00000528563 NSUN4Q96CB9 384 aaKnown RBP20.61■□□□□ 0.89
HIF3A-211ENST00000528563 TMEM39BQ9GZU3 492 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms