RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, human

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMTM1-210	ENST00000528441	TDRD7	Q8NHU6	1098 aa	Known RBP	11.25	□□□□□ -0.61
CMTM1-210	ENST00000528441	NEUROD6	Q96NK8	337 aa		11.25	□□□□□ -0.61
CMTM1-210	ENST00000528441	BCL11A	Q9H165	835 aa		11.25	□□□□□ -0.61
CMTM1-210	ENST00000528441	FOXN1	O15353	648 aa		11.24	□□□□□ -0.61
CMTM1-210	ENST00000528441	TNNI2	P48788	182 aa		11.24	□□□□□ -0.61
CMTM1-210	ENST00000528441	FKBP1A	P62942	108 aa	Known RBP	11.24	□□□□□ -0.61
CMTM1-210	ENST00000528441	NOG	Q13253	232 aa		11.24	□□□□□ -0.61
CMTM1-210	ENST00000528441	CERS5	Q8N5B7	392 aa		11.24	□□□□□ -0.61
CMTM1-210	ENST00000528441	C1orf115	Q9H7X2	142 aa		11.24	□□□□□ -0.61
CMTM1-210	ENST00000528441	MAST3	O60307	1309 aa		11.24	□□□□□ -0.61
CMTM1-210	ENST00000528441	CIAO1	O76071	339 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	MS4A1	P11836	297 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	RFX5	P48382	616 aa	Predicted RBP	11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	LBX1	P52954	281 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	MKRN3	Q13064	507 aa	Known RBP	11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	TNFAIP1	Q13829	316 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	PLCD3	Q8N3E9	789 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	TEKT1	Q969V4	418 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	CCDC102A	Q96A19	550 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	TSKS	Q9UJT2	592 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	ANGEL1	Q9UNK9	670 aa	Known RBP	11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	AKAP2	Q9Y2D5	859 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	FAM205A	Q6ZU69	1335 aa		11.23	□□□□□ -0.61
CMTM1-210	ENST00000528441	TCP10L2	B9ZVM9	353 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	UBE2Q2L	H0YL09	131 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	ZNF646	O15015	1829 aa	Predicted RBP	11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	PPP1R12B	O60237	982 aa	Predicted RBP	11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	CD44	P16070	742 aa	Known RBP	11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	MAP2K2	P36507	400 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	CRK	P46108	304 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	FKBP1B	P68106	108 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	ECM29	Q5VYK3	1845 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	MOB2	Q70IA6	237 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	FBXO33	Q7Z6M2	555 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	VGLL2	Q8N8G2	317 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	WDR66	Q8TBY9	1149 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	ARAP2	Q8WZ64	1704 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	HHIPL1	Q96JK4	782 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	YTHDC1	Q96MU7	727 aa	Known RBP	11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	PAPPA2	Q9BXP8	1791 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	DEFB129	Q9H1M3	183 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	TDRD3	Q9H7E2	651 aa	Known RBP	11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	IRS2	Q9Y4H2	1338 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	PCDHAC2	Q9Y5I4	1007 aa		11.22	□□□□□ -0.61
CMTM1-210	ENST00000528441	TFCP2	Q12800	502 aa		11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	SUPT20HL1	Q3ZLR7	823 aa		11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	ATG9A	Q7Z3C6	839 aa		11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	DZIP1	Q86YF9	867 aa	Known RBP	11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	PRMT6	Q96LA8	375 aa	Predicted RBP	11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	COPRS	Q9NQ92	184 aa		11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	WBP1L	Q9NX94	342 aa		11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	ABCF2	Q9UG63	623 aa		11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	SERPINA10	Q9UK55	444 aa		11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	DENND2A	Q9ULE3	1009 aa		11.21	□□□□□ -0.61
CMTM1-210	ENST00000528441	COL1A1	P02452	1464 aa	Predicted RBP	11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441		A0A1B0GUL7	405 aa		11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	SURF6	O75683	361 aa	Known RBP	11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	LDHB	P07195	334 aa	Known RBP	11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	KIF23	Q02241	960 aa	Predicted RBP	11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	MVP	Q14764	893 aa	Known RBP	11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	ZGPAT	Q8N5A5	531 aa	Known RBP	11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	PANK1	Q8TE04	598 aa		11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	ZNF70	Q9UC06	446 aa	Predicted RBP	11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	PPP2R3B	Q9Y5P8	575 aa		11.2	□□□□□ -0.62
CMTM1-210	ENST00000528441	AK9	Q5TCS8	1911 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	PNMA6E	A0A0J9YXQ4	647 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	CA12	O43570	354 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	FGFR2	P21802	821 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	ADORA1	P30542	326 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	PHKA1	P46020	1223 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	IREB2	P48200	963 aa	Known RBP	11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	TIMM10	P62072	90 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	RASA3	Q14644	834 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	TTC39A	Q5SRH9	613 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	MTMR14	Q8NCE2	650 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	RCAN3	Q9UKA8	241 aa		11.19	□□□□□ -0.62
CMTM1-210	ENST00000528441	SLC10A3	P09131	477 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	HSPA8	P11142	646 aa	Known RBP	11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	CACNB3	P54284	484 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	IFFO2	Q5TF58	517 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	CCDC102B	Q68D86	513 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	RASAL3	Q86YV0	1011 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	SLF2	Q8IX21	1173 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	SLC10A4	Q96EP9	437 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	XAGE2	Q96GT9	111 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	CHMP4B	Q9H444	224 aa	Known RBP	11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	FZD1	Q9UP38	647 aa		11.18	□□□□□ -0.62
CMTM1-210	ENST00000528441	AKAP11	Q9UKA4	1901 aa		11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	APBB1	O00213	710 aa		11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	SEMA3E	O15041	775 aa		11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	MTX1	Q13505	466 aa		11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	GRIK5	Q16478	980 aa		11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	CCDC158	Q5M9N0	1113 aa		11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	NOL10	Q9BSC4	688 aa	Known RBP	11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	PRDM10	Q9NQV6	1147 aa		11.17	□□□□□ -0.62
CMTM1-210	ENST00000528441	COG6	Q9Y2V7	657 aa		11.17	□□□□□ -0.62

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