RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
SCN3B-205ENST00000528267 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
SCN3B-205ENST00000528267 ANTXR1Q9H6X2 564 aa15.78■□□□□ 0.12
SCN3B-205ENST00000528267 PIH1D3Q9NQM4 214 aaKnown RBP15.78■□□□□ 0.12
SCN3B-205ENST00000528267 PGAP2Q9UHJ9 254 aa15.78■□□□□ 0.12
SCN3B-205ENST00000528267 MYH7P12883 1935 aa15.77■□□□□ 0.12
SCN3B-205ENST00000528267 CFAP100Q494V2 611 aa15.77■□□□□ 0.12
SCN3B-205ENST00000528267 ANKRD45Q5TZF3 282 aa15.77■□□□□ 0.12
SCN3B-205ENST00000528267 PNMA8AQ86V59 439 aaPredicted RBP15.77■□□□□ 0.12
SCN3B-205ENST00000528267 PRMT6Q96LA8 375 aaPredicted RBP15.77■□□□□ 0.12
SCN3B-205ENST00000528267 CDK5RAP2Q96SN8 1893 aa15.76■□□□□ 0.11
SCN3B-205ENST00000528267 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
SCN3B-205ENST00000528267 CRKP46108 304 aa15.76■□□□□ 0.11
SCN3B-205ENST00000528267 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
SCN3B-205ENST00000528267 CHADLQ6NUI6 762 aa15.76■□□□□ 0.11
SCN3B-205ENST00000528267 MTMR14Q8NCE2 650 aa15.76■□□□□ 0.11
SCN3B-205ENST00000528267 GGA3Q9NZ52 723 aa15.76■□□□□ 0.11
SCN3B-205ENST00000528267 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
SCN3B-205ENST00000528267 SPDYE2BA6NHP3 402 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 SPDYE6P0CI01 402 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 ANGEL2Q5VTE6 544 aaKnown RBP15.75■□□□□ 0.11
SCN3B-205ENST00000528267 PI4K2BQ8TCG2 481 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCN3B-205ENST00000528267 GLIS2Q9BZE0 524 aaPredicted RBP15.75■□□□□ 0.11
SCN3B-205ENST00000528267 LNPKQ9C0E8 428 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 BOLA2Q9H3K6 86 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 ABCF2Q9UG63 623 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 SERPINA10Q9UK55 444 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 CLEC11AQ9Y240 323 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 SUGT1Q9Y2Z0 365 aa15.75■□□□□ 0.11
SCN3B-205ENST00000528267 PASKQ96RG2 1323 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 TRAF5O00463 557 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 CHGBP05060 677 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 LDHBP07195 334 aaKnown RBP15.74■□□□□ 0.11
SCN3B-205ENST00000528267 ATP5JP18859 108 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 C1QTNF8P60827 252 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 NUCB1Q02818 461 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 APOBEC3HQ6NTF7 200 aaKnown RBP15.74■□□□□ 0.11
SCN3B-205ENST00000528267 OGFOD1Q8N543 542 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 SMC1BQ8NDV3 1235 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 NSUN4Q96CB9 384 aaKnown RBP15.74■□□□□ 0.11
SCN3B-205ENST00000528267 HDAC9Q9UKV0 1011 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 DAGLAQ9Y4D2 1042 aa15.74■□□□□ 0.11
SCN3B-205ENST00000528267 GAKO14976 1311 aa15.73■□□□□ 0.11
SCN3B-205ENST00000528267 PDE4AP27815 886 aa15.73■□□□□ 0.11
SCN3B-205ENST00000528267 MECOMQ03112 1051 aa15.73■□□□□ 0.11
SCN3B-205ENST00000528267 ADGRA1Q86SQ6 560 aa15.73■□□□□ 0.11
SCN3B-205ENST00000528267 CNTROBQ8N137 903 aa15.73■□□□□ 0.11
SCN3B-205ENST00000528267 ZC3H15Q8WU90 426 aaKnown RBP15.73■□□□□ 0.11
SCN3B-205ENST00000528267 ECHDC1Q9NTX5 307 aa15.73■□□□□ 0.11
SCN3B-205ENST00000528267 FOCADQ5VW36 1801 aa15.73■□□□□ 0.11
SCN3B-205ENST00000528267 CLRN2A0PK11 232 aa15.72■□□□□ 0.11
SCN3B-205ENST00000528267 HDLBPQ00341 1268 aaKnown RBP15.72■□□□□ 0.11
SCN3B-205ENST00000528267 DLGAP5Q15398 846 aa15.72■□□□□ 0.11
SCN3B-205ENST00000528267 SLFNL1Q499Z3 407 aa15.72■□□□□ 0.11
SCN3B-205ENST00000528267 CHD1LQ86WJ1 897 aa15.72■□□□□ 0.11
SCN3B-205ENST00000528267 ZDHHC15Q96MV8 337 aa15.72■□□□□ 0.11
SCN3B-205ENST00000528267 DNAJC2Q99543 621 aaKnown RBP15.72■□□□□ 0.11
SCN3B-205ENST00000528267 HAUS7Q99871 368 aa15.72■□□□□ 0.11
SCN3B-205ENST00000528267 TDRD3Q9H7E2 651 aaKnown RBP15.72■□□□□ 0.11
SCN3B-205ENST00000528267 RFX7Q2KHR2 1363 aa15.72■□□□□ 0.11
SCN3B-205ENST00000528267 SSC5DA1L4H1 1573 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 GOLIM4O00461 696 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 MX1P20591 662 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 MMP14P50281 582 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 RBM5P52756 815 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCN3B-205ENST00000528267 CACNB3P54284 484 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 FSTL1Q12841 308 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 HHIPL2Q6UWX4 724 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 ERICH6Q7L0X2 663 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 SKAP1Q86WV1 359 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 ZGPATQ8N5A5 531 aaKnown RBP15.71■□□□□ 0.11
SCN3B-205ENST00000528267 TEKT1Q969V4 418 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 MRIQ9BWK5 157 aa15.71■□□□□ 0.11
SCN3B-205ENST00000528267 MROH7-TTC4A0A0A0MT08 1334 aa15.7■□□□□ 0.1
SCN3B-205ENST00000528267 MAST3O60307 1309 aa15.7■□□□□ 0.1
SCN3B-205ENST00000528267 USP48Q86UV5 1035 aa15.7■□□□□ 0.1
SCN3B-205ENST00000528267 DZIP1Q86YF9 867 aaKnown RBP15.7■□□□□ 0.1
SCN3B-205ENST00000528267 CDAN1Q8IWY9 1227 aa15.7■□□□□ 0.1
SCN3B-205ENST00000528267 RAI14Q9P0K7 980 aa15.7■□□□□ 0.1
SCN3B-205ENST00000528267 ZNF70Q9UC06 446 aaPredicted RBP15.7■□□□□ 0.1
SCN3B-205ENST00000528267 STAP2Q9UGK3 403 aa15.7■□□□□ 0.1
SCN3B-205ENST00000528267 CNTNAP1P78357 1384 aa15.7■□□□□ 0.1
SCN3B-205ENST00000528267 PAPPA2Q9BXP8 1791 aa15.7■□□□□ 0.1
SCN3B-205ENST00000528267 TTC41PQ6P2S7 1318 aa15.69■□□□□ 0.1
SCN3B-205ENST00000528267 PITPNM2Q9BZ72 1349 aa15.69■□□□□ 0.1
SCN3B-205ENST00000528267 MAP4K4O95819 1239 aaPredicted RBP15.69■□□□□ 0.1
SCN3B-205ENST00000528267 PDE1AP54750 535 aa15.69■□□□□ 0.1
SCN3B-205ENST00000528267 PRAMEF18Q5VWM3 479 aa15.69■□□□□ 0.1
SCN3B-205ENST00000528267 CDC42EP5Q6NZY7 148 aa15.69■□□□□ 0.1
SCN3B-205ENST00000528267 PLEKHM2Q8IWE5 1019 aa15.69■□□□□ 0.1
SCN3B-205ENST00000528267 FAM163AQ96GL9 167 aaPredicted RBP15.69■□□□□ 0.1
SCN3B-205ENST00000528267 PAG1Q9NWQ8 432 aa15.69■□□□□ 0.1
SCN3B-205ENST00000528267 LRP2BPQ9P2M1 347 aa15.69■□□□□ 0.1
SCN3B-205ENST00000528267 DDX60LQ5H9U9 1706 aaKnown RBP15.68■□□□□ 0.1
SCN3B-205ENST00000528267 SIPA1L1O43166 1804 aa15.68■□□□□ 0.1
SCN3B-205ENST00000528267 RHBDL3P58872 404 aa15.68■□□□□ 0.1
SCN3B-205ENST00000528267 HTRA3P83110 453 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms