RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 INHBEP58166 350 aa32.42■■■□□ 2.78
TRIM3-206ENST00000528227 TBC1D22AQ8WUA7 517 aa32.42■■■□□ 2.78
TRIM3-206ENST00000528227 FRAT2O75474 233 aaPredicted RBP32.41■■■□□ 2.78
TRIM3-206ENST00000528227 ALDH1A1P00352 501 aa32.41■■■□□ 2.78
TRIM3-206ENST00000528227 RFX5P48382 616 aaPredicted RBP32.41■■■□□ 2.78
TRIM3-206ENST00000528227 PKN2Q16513 984 aaKnown RBP32.41■■■□□ 2.78
TRIM3-206ENST00000528227 R3HDMLQ9H3Y0 253 aa32.41■■■□□ 2.78
TRIM3-206ENST00000528227 KIF16BQ96L93 1317 aa32.41■■■□□ 2.78
TRIM3-206ENST00000528227 OTOFQ9HC10 1997 aa32.4■■■□□ 2.78
TRIM3-206ENST00000528227 FGFR2P21802 821 aa32.4■■■□□ 2.78
TRIM3-206ENST00000528227 BCAMP50895 628 aa32.4■■■□□ 2.78
TRIM3-206ENST00000528227 PUM3Q15397 648 aaKnown RBP32.4■■■□□ 2.78
TRIM3-206ENST00000528227 IFNL1Q8IU54 200 aa32.4■■■□□ 2.78
TRIM3-206ENST00000528227 HDLBPQ00341 1268 aaKnown RBP32.39■■■□□ 2.78
TRIM3-206ENST00000528227 ANKRD13AQ8IZ07 590 aa32.39■■■□□ 2.78
TRIM3-206ENST00000528227 TEPSINQ96N21 525 aa32.39■■■□□ 2.78
TRIM3-206ENST00000528227 EYA2O00167 538 aa32.38■■■□□ 2.77
TRIM3-206ENST00000528227 IFIT1P09914 478 aaKnown RBP32.38■■■□□ 2.77
TRIM3-206ENST00000528227 HPS5Q9UPZ3 1129 aa32.38■■■□□ 2.77
TRIM3-206ENST00000528227 TCP10L2B9ZVM9 353 aa32.37■■■□□ 2.77
TRIM3-206ENST00000528227 FKTNO75072 461 aa32.37■■■□□ 2.77
TRIM3-206ENST00000528227 CT47B1P0C2W7 299 aaPredicted RBP32.37■■■□□ 2.77
TRIM3-206ENST00000528227 SOX10P56693 466 aa32.37■■■□□ 2.77
TRIM3-206ENST00000528227 CDAN1Q8IWY9 1227 aa32.37■■■□□ 2.77
TRIM3-206ENST00000528227 GJA5P36382 358 aa32.36■■■□□ 2.77
TRIM3-206ENST00000528227 TMEM39BQ9GZU3 492 aa32.36■■■□□ 2.77
TRIM3-206ENST00000528227 IGF2BP3O00425 579 aaKnown RBP eCLIP32.35■■■□□ 2.77
TRIM3-206ENST00000528227 TNNI2P48788 182 aa32.35■■■□□ 2.77
TRIM3-206ENST00000528227 TEKT1Q969V4 418 aa32.35■■■□□ 2.77
TRIM3-206ENST00000528227 ATG9AQ7Z3C6 839 aa32.34■■■□□ 2.77
TRIM3-206ENST00000528227 MRIQ9BWK5 157 aa32.34■■■□□ 2.77
TRIM3-206ENST00000528227 NOB1Q9ULX3 412 aaKnown RBP32.34■■■□□ 2.77
TRIM3-206ENST00000528227 UBTFL1P0CB47 393 aaPredicted RBP32.33■■■□□ 2.77
TRIM3-206ENST00000528227 LPIN2Q92539 896 aa32.33■■■□□ 2.77
TRIM3-206ENST00000528227 ZDHHC15Q96MV8 337 aa32.33■■■□□ 2.77
TRIM3-206ENST00000528227 SUGT1Q9Y2Z0 365 aa32.33■■■□□ 2.77
TRIM3-206ENST00000528227 SLC5A1P13866 664 aa32.32■■■□□ 2.76
TRIM3-206ENST00000528227 ELP3Q9H9T3 547 aa32.32■■■□□ 2.76
TRIM3-206ENST00000528227 MYH13Q9UKX3 1938 aa32.32■■■□□ 2.76
TRIM3-206ENST00000528227 MAST3O60307 1309 aa32.31■■■□□ 2.76
TRIM3-206ENST00000528227 CACNB3P54284 484 aa32.3■■■□□ 2.76
TRIM3-206ENST00000528227 FBXO46Q6PJ61 603 aaPredicted RBP32.3■■■□□ 2.76
TRIM3-206ENST00000528227 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.3■■■□□ 2.76
TRIM3-206ENST00000528227 OPTNQ96CV9 577 aa32.3■■■□□ 2.76
TRIM3-206ENST00000528227 API5Q9BZZ5 524 aaKnown RBP32.3■■■□□ 2.76
TRIM3-206ENST00000528227 FBXO3Q9UK99 471 aa32.3■■■□□ 2.76
TRIM3-206ENST00000528227 TESPA1A2RU30 521 aaPredicted RBP32.29■■■□□ 2.76
TRIM3-206ENST00000528227 CCER2I3L3R5 266 aa32.29■■■□□ 2.76
TRIM3-206ENST00000528227 APOBEC3HQ6NTF7 200 aaKnown RBP32.29■■■□□ 2.76
TRIM3-206ENST00000528227 CIAO1O76071 339 aa32.28■■■□□ 2.76
TRIM3-206ENST00000528227 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.28■■■□□ 2.76
TRIM3-206ENST00000528227 SIL1Q9H173 461 aa32.28■■■□□ 2.76
TRIM3-206ENST00000528227 MAP3K9P80192 1104 aa32.27■■■□□ 2.76
TRIM3-206ENST00000528227 VGLL4Q14135 290 aa32.27■■■□□ 2.76
TRIM3-206ENST00000528227 OTUD7BQ6GQQ9 843 aa32.27■■■□□ 2.76
TRIM3-206ENST00000528227 HHIPL2Q6UWX4 724 aa32.27■■■□□ 2.76
TRIM3-206ENST00000528227 WDR66Q8TBY9 1149 aa32.27■■■□□ 2.76
TRIM3-206ENST00000528227 PTPN18Q99952 460 aa32.27■■■□□ 2.76
TRIM3-206ENST00000528227 TMOD2Q9NZR1 351 aa32.27■■■□□ 2.76
TRIM3-206ENST00000528227 FKBP1CQ5VVH2 108 aa32.26■■■□□ 2.75
TRIM3-206ENST00000528227 FAM83AQ86UY5 434 aa32.26■■■□□ 2.75
TRIM3-206ENST00000528227 LRRFIP2Q9Y608 721 aaKnown RBP32.26■■■□□ 2.75
TRIM3-206ENST00000528227 CRHR2Q13324 411 aa32.25■■■□□ 2.75
TRIM3-206ENST00000528227 CNKSR2Q8WXI2 1034 aa32.25■■■□□ 2.75
TRIM3-206ENST00000528227 MS4A4AQ96JQ5 239 aa32.25■■■□□ 2.75
TRIM3-206ENST00000528227 TNRC18O15417 2968 aaPredicted RBP32.24■■■□□ 2.75
TRIM3-206ENST00000528227 RARSP54136 660 aaKnown RBP32.24■■■□□ 2.75
TRIM3-206ENST00000528227 ATP2B3Q16720 1220 aa32.24■■■□□ 2.75
TRIM3-206ENST00000528227 CEP126Q9P2H0 1117 aa32.24■■■□□ 2.75
TRIM3-206ENST00000528227 HDAC5Q9UQL6 1122 aa32.24■■■□□ 2.75
TRIM3-206ENST00000528227 CSADQ9Y600 493 aa32.23■■■□□ 2.75
TRIM3-206ENST00000528227 MEIS3Q99687 375 aa32.22■■■□□ 2.75
TRIM3-206ENST00000528227 RPAP1Q9BWH6 1393 aaPredicted RBP32.21■■■□□ 2.75
TRIM3-206ENST00000528227 IL15P40933 162 aaPredicted RBP32.21■■■□□ 2.75
TRIM3-206ENST00000528227 PA2G4Q9UQ80 394 aaKnown RBP32.21■■■□□ 2.75
TRIM3-206ENST00000528227 TRIM17Q9Y577 477 aa32.21■■■□□ 2.75
TRIM3-206ENST00000528227 OTOP1Q7RTM1 612 aa32.2■■■□□ 2.75
TRIM3-206ENST00000528227 BRI3BPQ8WY22 251 aa32.2■■■□□ 2.75
TRIM3-206ENST00000528227 COPRSQ9NQ92 184 aa32.2■■■□□ 2.75
TRIM3-206ENST00000528227 GNL3LQ9NVN8 582 aaKnown RBP32.2■■■□□ 2.75
TRIM3-206ENST00000528227 GTF2A2P52657 109 aa32.19■■■□□ 2.74
TRIM3-206ENST00000528227 ARHGAP45Q92619 1136 aa32.19■■■□□ 2.74
TRIM3-206ENST00000528227 HOOK2Q96ED9 719 aa32.19■■■□□ 2.74
TRIM3-206ENST00000528227 OTUD5Q96G74 571 aa32.19■■■□□ 2.74
TRIM3-206ENST00000528227 ERO1AQ96HE7 468 aa32.19■■■□□ 2.74
TRIM3-206ENST00000528227 DAGLAQ9Y4D2 1042 aa32.19■■■□□ 2.74
TRIM3-206ENST00000528227 SNCAIPQ9Y6H5 919 aa32.19■■■□□ 2.74
TRIM3-206ENST00000528227 SPDYE5A6NIY4 337 aa32.18■■■□□ 2.74
TRIM3-206ENST00000528227 PRDX5P30044 214 aa32.18■■■□□ 2.74
TRIM3-206ENST00000528227 WRNIP1Q96S55 665 aa32.18■■■□□ 2.74
TRIM3-206ENST00000528227 CCL15-CCL14A0A0B4J2E2 113 aa32.17■■■□□ 2.74
TRIM3-206ENST00000528227 DIXDC1Q155Q3 683 aa32.17■■■□□ 2.74
TRIM3-206ENST00000528227 CCL15Q16663 113 aa32.17■■■□□ 2.74
TRIM3-206ENST00000528227 INTS3Q68E01 1043 aaKnown RBP32.17■■■□□ 2.74
TRIM3-206ENST00000528227 CD99L2Q8TCZ2 262 aa32.17■■■□□ 2.74
TRIM3-206ENST00000528227 PHKA1P46020 1223 aa32.16■■■□□ 2.74
TRIM3-206ENST00000528227 DENND2AQ9ULE3 1009 aa32.16■■■□□ 2.74
TRIM3-206ENST00000528227 SALL1Q9NSC2 1324 aa32.16■■■□□ 2.74
TRIM3-206ENST00000528227 SEMA3EO15041 775 aa32.15■■■□□ 2.74
TRIM3-206ENST00000528227 SP3Q02447 781 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms