RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 ATP2B3Q16720 1220 aa28.77■■■□□ 2.2
PKP3-206ENST00000528036 RNF186Q9NXI6 227 aa28.77■■■□□ 2.2
PKP3-206ENST00000528036 ZNF70Q9UC06 446 aaPredicted RBP28.77■■■□□ 2.2
PKP3-206ENST00000528036 TSKSQ9UJT2 592 aa28.77■■■□□ 2.2
PKP3-206ENST00000528036 ANGEL1Q9UNK9 670 aaKnown RBP28.77■■■□□ 2.2
PKP3-206ENST00000528036 CAPN15O75808 1086 aa28.76■■■□□ 2.19
PKP3-206ENST00000528036 SREBF2Q12772 1141 aa28.76■■■□□ 2.19
PKP3-206ENST00000528036 RASA3Q14644 834 aa28.76■■■□□ 2.19
PKP3-206ENST00000528036 FRAT1Q92837 279 aaPredicted RBP28.76■■■□□ 2.19
PKP3-206ENST00000528036 SIL1Q9H173 461 aa28.76■■■□□ 2.19
PKP3-206ENST00000528036 IQSEC3Q9UPP2 1182 aaPredicted RBP28.76■■■□□ 2.19
PKP3-206ENST00000528036 SEMA3EO15041 775 aa28.75■■■□□ 2.19
PKP3-206ENST00000528036 IREB2P48200 963 aaKnown RBP28.75■■■□□ 2.19
PKP3-206ENST00000528036 ZKSCAN2Q63HK3 967 aa28.75■■■□□ 2.19
PKP3-206ENST00000528036 PCDHAC2Q9Y5I4 1007 aa28.75■■■□□ 2.19
PKP3-206ENST00000528036 TRPA1O75762 1119 aa28.74■■■□□ 2.19
PKP3-206ENST00000528036 GNAI2P04899 355 aa28.74■■■□□ 2.19
PKP3-206ENST00000528036 TM4SF4P48230 202 aa28.74■■■□□ 2.19
PKP3-206ENST00000528036 SLC10A4Q96EP9 437 aa28.74■■■□□ 2.19
PKP3-206ENST00000528036 ZDHHC15Q96MV8 337 aa28.74■■■□□ 2.19
PKP3-206ENST00000528036 AKAP2Q9Y2D5 859 aa28.74■■■□□ 2.19
PKP3-206ENST00000528036 SRGAP3O43295 1099 aa28.73■■■□□ 2.19
PKP3-206ENST00000528036 BCAR3O75815 825 aa28.73■■■□□ 2.19
PKP3-206ENST00000528036 INHBEP58166 350 aa28.73■■■□□ 2.19
PKP3-206ENST00000528036 HHIPL2Q6UWX4 724 aa28.73■■■□□ 2.19
PKP3-206ENST00000528036 TDRD3Q9H7E2 651 aaKnown RBP28.73■■■□□ 2.19
PKP3-206ENST00000528036 TMOD2Q9NZR1 351 aa28.73■■■□□ 2.19
PKP3-206ENST00000528036 PRKG1Q13976 671 aa28.72■■■□□ 2.19
PKP3-206ENST00000528036 FKBP1CQ5VVH2 108 aa28.72■■■□□ 2.19
PKP3-206ENST00000528036 DENND2AQ9ULE3 1009 aa28.72■■■□□ 2.19
PKP3-206ENST00000528036 ZBTB48P10074 688 aaPredicted RBP28.71■■■□□ 2.19
PKP3-206ENST00000528036 HOOK2Q96ED9 719 aa28.71■■■□□ 2.19
PKP3-206ENST00000528036 ECM29Q5VYK3 1845 aa28.71■■■□□ 2.19
PKP3-206ENST00000528036 NBPF12Q5TAG4 269 aaPredicted RBP28.7■■■□□ 2.18
PKP3-206ENST00000528036 SPRYD7Q5W111 196 aa28.7■■■□□ 2.18
PKP3-206ENST00000528036 ZGPATQ8N5A5 531 aaKnown RBP28.7■■■□□ 2.18
PKP3-206ENST00000528036 ABHD8Q96I13 439 aa28.7■■■□□ 2.18
PKP3-206ENST00000528036 ZBED9Q6R2W3 1325 aa28.69■■■□□ 2.18
PKP3-206ENST00000528036 MANSC4A6NHS7 340 aaPredicted RBP28.69■■■□□ 2.18
PKP3-206ENST00000528036 ALDH1A1P00352 501 aa28.69■■■□□ 2.18
PKP3-206ENST00000528036 ANKRD13AQ8IZ07 590 aa28.69■■■□□ 2.18
PKP3-206ENST00000528036 PA2G4Q9UQ80 394 aaKnown RBP28.69■■■□□ 2.18
PKP3-206ENST00000528036 ARAP2Q8WZ64 1704 aa28.69■■■□□ 2.18
PKP3-206ENST00000528036 NOM1Q5C9Z4 860 aaKnown RBP28.68■■■□□ 2.18
PKP3-206ENST00000528036 SALL1Q9NSC2 1324 aa28.68■■■□□ 2.18
PKP3-206ENST00000528036 FAM83AQ86UY5 434 aa28.67■■■□□ 2.18
PKP3-206ENST00000528036 GRIK5Q16478 980 aa28.66■■■□□ 2.18
PKP3-206ENST00000528036 CLUAP1Q96AJ1 413 aa28.66■■■□□ 2.18
PKP3-206ENST00000528036 AOX1Q06278 1338 aa28.66■■■□□ 2.18
PKP3-206ENST00000528036 TCP10L2B9ZVM9 353 aa28.65■■■□□ 2.18
PKP3-206ENST00000528036 USP2O75604 605 aaPredicted RBP28.65■■■□□ 2.18
PKP3-206ENST00000528036 FTSJ3Q8IY81 847 aaKnown RBP28.65■■■□□ 2.18
PKP3-206ENST00000528036 CFHR5Q9BXR6 569 aa28.65■■■□□ 2.18
PKP3-206ENST00000528036 PDS5AQ29RF7 1337 aaKnown RBP28.65■■■□□ 2.18
PKP3-206ENST00000528036 AKAP11Q9UKA4 1901 aa28.65■■■□□ 2.18
PKP3-206ENST00000528036 LDHBP07195 334 aaKnown RBP28.64■■■□□ 2.18
PKP3-206ENST00000528036 MVPQ14764 893 aaKnown RBP28.64■■■□□ 2.18
PKP3-206ENST00000528036 APOBEC3HQ6NTF7 200 aaKnown RBP28.64■■■□□ 2.18
PKP3-206ENST00000528036 TEPSINQ96N21 525 aa28.64■■■□□ 2.18
PKP3-206ENST00000528036 SSC5DA1L4H1 1573 aa28.63■■■□□ 2.17
PKP3-206ENST00000528036 G3BP1Q13283 466 aaKnown RBP eCLIP28.63■■■□□ 2.17
PKP3-206ENST00000528036 DGKZQ13574 1117 aa28.63■■■□□ 2.17
PKP3-206ENST00000528036 CCDC102BQ68D86 513 aa28.63■■■□□ 2.17
PKP3-206ENST00000528036 WNK4Q96J92 1243 aa28.63■■■□□ 2.17
PKP3-206ENST00000528036 MCOLN1Q9GZU1 580 aa28.63■■■□□ 2.17
PKP3-206ENST00000528036 OTUD7BQ6GQQ9 843 aa28.62■■■□□ 2.17
PKP3-206ENST00000528036 SLF2Q8IX21 1173 aa28.62■■■□□ 2.17
PKP3-206ENST00000528036 TMEM57Q8N5G2 664 aa28.62■■■□□ 2.17
PKP3-206ENST00000528036 PHKA1P46020 1223 aa28.61■■■□□ 2.17
PKP3-206ENST00000528036 SPTY2D1Q68D10 685 aaPredicted RBP28.61■■■□□ 2.17
PKP3-206ENST00000528036 TMEM39BQ9GZU3 492 aa28.61■■■□□ 2.17
PKP3-206ENST00000528036 A0A1B0GUL7 405 aa28.6■■■□□ 2.17
PKP3-206ENST00000528036 MKRN3Q13064 507 aaKnown RBP28.6■■■□□ 2.17
PKP3-206ENST00000528036 MS4A1P11836 297 aa28.59■■■□□ 2.17
PKP3-206ENST00000528036 TIMM10P62072 90 aa28.59■■■□□ 2.17
PKP3-206ENST00000528036 MAP3K9P80192 1104 aa28.59■■■□□ 2.17
PKP3-206ENST00000528036 TFCP2Q12800 502 aa28.59■■■□□ 2.17
PKP3-206ENST00000528036 DCAF15Q66K64 600 aa28.59■■■□□ 2.17
PKP3-206ENST00000528036 CLMNQ96JQ2 1002 aa28.59■■■□□ 2.17
PKP3-206ENST00000528036 CSADQ9Y600 493 aa28.59■■■□□ 2.17
PKP3-206ENST00000528036 RPAP1Q9BWH6 1393 aaPredicted RBP28.59■■■□□ 2.17
PKP3-206ENST00000528036 PKN2Q16513 984 aaKnown RBP28.58■■■□□ 2.17
PKP3-206ENST00000528036 CTU1Q7Z7A3 348 aaKnown RBP28.58■■■□□ 2.17
PKP3-206ENST00000528036 XAGE2Q96GT9 111 aa28.58■■■□□ 2.17
PKP3-206ENST00000528036 FZD1Q9UP38 647 aa28.58■■■□□ 2.17
PKP3-206ENST00000528036 CASP8AP2Q9UKL3 1982 aa28.57■■■□□ 2.16
PKP3-206ENST00000528036 GORABQ5T7V8 394 aa28.57■■■□□ 2.16
PKP3-206ENST00000528036 TNNQ9UQP3 1299 aa28.57■■■□□ 2.16
PKP3-206ENST00000528036 DAGLAQ9Y4D2 1042 aa28.57■■■□□ 2.16
PKP3-206ENST00000528036 PRDX5P30044 214 aa28.56■■■□□ 2.16
PKP3-206ENST00000528036 ADORA1P30542 326 aa28.56■■■□□ 2.16
PKP3-206ENST00000528036 ATP8B2P98198 1209 aa28.56■■■□□ 2.16
PKP3-206ENST00000528036 IFNL1Q8IU54 200 aa28.56■■■□□ 2.16
PKP3-206ENST00000528036 FAM151AQ8WW52 585 aa28.56■■■□□ 2.16
PKP3-206ENST00000528036 NEUROD6Q96NK8 337 aa28.56■■■□□ 2.16
PKP3-206ENST00000528036 PNMA6EA0A0J9YXQ4 647 aa28.55■■■□□ 2.16
PKP3-206ENST00000528036 GPR25O00155 361 aa28.55■■■□□ 2.16
PKP3-206ENST00000528036 TBC1D8O95759 1140 aa28.55■■■□□ 2.16
PKP3-206ENST00000528036 ITPRIPQ8IWB1 547 aa28.55■■■□□ 2.16
PKP3-206ENST00000528036 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms