RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, human

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSSCA1-205	ENST00000527920	AOX1	Q06278	1338 aa		40.95	■■■■■ 4.15
SSSCA1-205	ENST00000527920	ZBTB7B	O15156	539 aa	Predicted RBP	40.94	■■■■■ 4.14
SSSCA1-205	ENST00000527920	TNFAIP1	Q13829	316 aa		40.94	■■■■■ 4.14
SSSCA1-205	ENST00000527920	IFFO2	Q5TF58	517 aa		40.94	■■■■■ 4.14
SSSCA1-205	ENST00000527920	VEZT	Q9HBM0	779 aa		40.94	■■■■■ 4.14
SSSCA1-205	ENST00000527920	HSPA8	P11142	646 aa	Known RBP	40.93	■■■■■ 4.14
SSSCA1-205	ENST00000527920	POLA2	Q14181	598 aa		40.93	■■■■■ 4.14
SSSCA1-205	ENST00000527920	TEKT1	Q969V4	418 aa		40.93	■■■■■ 4.14
SSSCA1-205	ENST00000527920	ZNF70	Q9UC06	446 aa	Predicted RBP	40.93	■■■■■ 4.14
SSSCA1-205	ENST00000527920	MS4A1	P11836	297 aa		40.92	■■■■■ 4.14
SSSCA1-205	ENST00000527920	TFCP2	Q12800	502 aa		40.92	■■■■■ 4.14
SSSCA1-205	ENST00000527920	PHKA1	P46020	1223 aa		40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	TTLL12	Q14166	644 aa	Predicted RBP	40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	MOB2	Q70IA6	237 aa		40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	ARMC9	Q7Z3E5	817 aa		40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	RASAL3	Q86YV0	1011 aa		40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	SSH3	Q8TE77	659 aa		40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	ZDHHC15	Q96MV8	337 aa		40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	ZIC5	Q96T25	663 aa		40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	DENND2A	Q9ULE3	1009 aa		40.91	■■■■■ 4.14
SSSCA1-205	ENST00000527920	UBE2Q2L	H0YL09	131 aa		40.9	■■■■■ 4.14
SSSCA1-205	ENST00000527920	ATP8B2	P98198	1209 aa		40.9	■■■■■ 4.14
SSSCA1-205	ENST00000527920	CCDC102B	Q68D86	513 aa		40.9	■■■■■ 4.14
SSSCA1-205	ENST00000527920	TDRD3	Q9H7E2	651 aa	Known RBP	40.9	■■■■■ 4.14
SSSCA1-205	ENST00000527920	SALL1	Q9NSC2	1324 aa		40.9	■■■■■ 4.14
SSSCA1-205	ENST00000527920		A0A1B0GUL7	405 aa		40.89	■■■■■ 4.14
SSSCA1-205	ENST00000527920	ADORA1	P30542	326 aa		40.89	■■■■■ 4.14
SSSCA1-205	ENST00000527920	LBX1	P52954	281 aa		40.89	■■■■■ 4.14
SSSCA1-205	ENST00000527920	G3BP1	Q13283	466 aa	Known RBP eCLIP	40.89	■■■■■ 4.14
SSSCA1-205	ENST00000527920	SUPT20HL1	Q3ZLR7	823 aa		40.89	■■■■■ 4.14
SSSCA1-205	ENST00000527920	HHIPL2	Q6UWX4	724 aa		40.89	■■■■■ 4.14
SSSCA1-205	ENST00000527920	TIMM10	P62072	90 aa		40.88	■■■■■ 4.13
SSSCA1-205	ENST00000527920	RASA3	Q14644	834 aa		40.88	■■■■■ 4.13
SSSCA1-205	ENST00000527920	PDS5A	Q29RF7	1337 aa	Known RBP	40.88	■■■■■ 4.13
SSSCA1-205	ENST00000527920	MYH13	Q9UKX3	1938 aa		40.87	■■■■■ 4.13
SSSCA1-205	ENST00000527920	MVP	Q14764	893 aa	Known RBP	40.87	■■■■■ 4.13
SSSCA1-205	ENST00000527920	MAP3K11	Q16584	847 aa		40.87	■■■■■ 4.13
SSSCA1-205	ENST00000527920	SSC5D	A1L4H1	1573 aa		40.86	■■■■■ 4.13
SSSCA1-205	ENST00000527920	KIF23	Q02241	960 aa	Predicted RBP	40.86	■■■■■ 4.13
SSSCA1-205	ENST00000527920	LDLRAD1	Q5T700	205 aa		40.86	■■■■■ 4.13
SSSCA1-205	ENST00000527920	REM2	Q8IYK8	340 aa	Predicted RBP	40.86	■■■■■ 4.13
SSSCA1-205	ENST00000527920	XAGE2	Q96GT9	111 aa		40.85	■■■■■ 4.13
SSSCA1-205	ENST00000527920	TNS4	Q8IZW8	715 aa		40.84	■■■■■ 4.13
SSSCA1-205	ENST00000527920	PANK1	Q8TE04	598 aa		40.84	■■■■■ 4.13
SSSCA1-205	ENST00000527920	RCAN3	Q9UKA8	241 aa		40.84	■■■■■ 4.13
SSSCA1-205	ENST00000527920	UNCX	A6NJT0	531 aa		40.83	■■■■■ 4.13
SSSCA1-205	ENST00000527920	PPP1R12B	O60237	982 aa	Predicted RBP	40.83	■■■■■ 4.13
SSSCA1-205	ENST00000527920	APOBEC3H	Q6NTF7	200 aa	Known RBP	40.83	■■■■■ 4.13
SSSCA1-205	ENST00000527920	C1orf115	Q9H7X2	142 aa		40.83	■■■■■ 4.13
SSSCA1-205	ENST00000527920	FKBP1C	Q5VVH2	108 aa		40.82	■■■■■ 4.13
SSSCA1-205	ENST00000527920	ZGPAT	Q8N5A5	531 aa	Known RBP	40.82	■■■■■ 4.13
SSSCA1-205	ENST00000527920	ANGEL1	Q9UNK9	670 aa	Known RBP	40.82	■■■■■ 4.13
SSSCA1-205	ENST00000527920	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	40.82	■■■■■ 4.13
SSSCA1-205	ENST00000527920	TNNI2	P48788	182 aa		40.81	■■■■■ 4.12
SSSCA1-205	ENST00000527920	RASGRF1	Q13972	1273 aa		40.81	■■■■■ 4.12
SSSCA1-205	ENST00000527920	NBPF12	Q5TAG4	269 aa	Predicted RBP	40.81	■■■■■ 4.12
SSSCA1-205	ENST00000527920	LDHB	P07195	334 aa	Known RBP	40.8	■■■■■ 4.12
SSSCA1-205	ENST00000527920	PRDX5	P30044	214 aa		40.8	■■■■■ 4.12
SSSCA1-205	ENST00000527920	GPR108	Q9NPR9	543 aa		40.8	■■■■■ 4.12
SSSCA1-205	ENST00000527920	SAGE1	Q9NXZ1	904 aa		40.8	■■■■■ 4.12
SSSCA1-205	ENST00000527920	NOP58	Q9Y2X3	529 aa	Known RBP	40.8	■■■■■ 4.12
SSSCA1-205	ENST00000527920	PRKG1	Q13976	671 aa		40.79	■■■■■ 4.12
SSSCA1-205	ENST00000527920	TMOD2	Q9NZR1	351 aa		40.79	■■■■■ 4.12
SSSCA1-205	ENST00000527920	TEPSIN	Q96N21	525 aa		40.78	■■■■■ 4.12
SSSCA1-205	ENST00000527920	NEUROD6	Q96NK8	337 aa		40.78	■■■■■ 4.12
SSSCA1-205	ENST00000527920	CSRNP1	Q96S65	589 aa		40.78	■■■■■ 4.12
SSSCA1-205	ENST00000527920	TCP10L2	B9ZVM9	353 aa		40.77	■■■■■ 4.12
SSSCA1-205	ENST00000527920	CEP85	Q6P2H3	762 aa		40.76	■■■■■ 4.12
SSSCA1-205	ENST00000527920	FAM83A	Q86UY5	434 aa		40.76	■■■■■ 4.12
SSSCA1-205	ENST00000527920	DAGLA	Q9Y4D2	1042 aa		40.76	■■■■■ 4.12
SSSCA1-205	ENST00000527920	SURF6	O75683	361 aa	Known RBP	40.75	■■■■■ 4.11
SSSCA1-205	ENST00000527920	IREB2	P48200	963 aa	Known RBP	40.74	■■■■■ 4.11
SSSCA1-205	ENST00000527920	OS9	Q13438	667 aa	Predicted RBP	40.73	■■■■■ 4.11
SSSCA1-205	ENST00000527920	DIXDC1	Q155Q3	683 aa		40.73	■■■■■ 4.11
SSSCA1-205	ENST00000527920	GORAB	Q5T7V8	394 aa		40.73	■■■■■ 4.11
SSSCA1-205	ENST00000527920	TMEM39B	Q9GZU3	492 aa		40.73	■■■■■ 4.11
SSSCA1-205	ENST00000527920	DDX19B	Q9UMR2	479 aa		40.73	■■■■■ 4.11
SSSCA1-205	ENST00000527920	ARID4A	P29374	1257 aa	Predicted RBP	40.72	■■■■■ 4.11
SSSCA1-205	ENST00000527920	TSKS	Q9UJT2	592 aa		40.72	■■■■■ 4.11
SSSCA1-205	ENST00000527920	FZD1	Q9UP38	647 aa		40.72	■■■■■ 4.11
SSSCA1-205	ENST00000527920	USP2	O75604	605 aa	Predicted RBP	40.71	■■■■■ 4.11
SSSCA1-205	ENST00000527920	SPTY2D1	Q68D10	685 aa	Predicted RBP	40.71	■■■■■ 4.11
SSSCA1-205	ENST00000527920	RPAP1	Q9BWH6	1393 aa	Predicted RBP	40.71	■■■■■ 4.11
SSSCA1-205	ENST00000527920	TNNI3K	Q59H18	835 aa		40.7	■■■■■ 4.11
SSSCA1-205	ENST00000527920	FPGT-TNNI3K	V9GXZ4	949 aa		40.7	■■■■■ 4.11
SSSCA1-205	ENST00000527920	CACNB3	P54284	484 aa		40.69	■■■■■ 4.1
SSSCA1-205	ENST00000527920	SPRYD7	Q5W111	196 aa		40.69	■■■■■ 4.1
SSSCA1-205	ENST00000527920	SLC10A4	Q96EP9	437 aa		40.69	■■■■■ 4.1
SSSCA1-205	ENST00000527920	RNF186	Q9NXI6	227 aa		40.69	■■■■■ 4.1
SSSCA1-205	ENST00000527920	HMG20B	Q9P0W2	317 aa		40.69	■■■■■ 4.1
SSSCA1-205	ENST00000527920	UQCRFS1P1	P0C7P4	283 aa		40.68	■■■■■ 4.1
SSSCA1-205	ENST00000527920	CDAN1	Q8IWY9	1227 aa		40.68	■■■■■ 4.1
SSSCA1-205	ENST00000527920	ANKRD13A	Q8IZ07	590 aa		40.68	■■■■■ 4.1
SSSCA1-205	ENST00000527920	CHMP4B	Q9H444	224 aa	Known RBP	40.68	■■■■■ 4.1
SSSCA1-205	ENST00000527920	GAK	O14976	1311 aa		40.67	■■■■■ 4.1
SSSCA1-205	ENST00000527920	SLF2	Q8IX21	1173 aa		40.67	■■■■■ 4.1
SSSCA1-205	ENST00000527920	SPATA5	Q8NB90	893 aa		40.67	■■■■■ 4.1
SSSCA1-205	ENST00000527920	HOOK2	Q96ED9	719 aa		40.67	■■■■■ 4.1
SSSCA1-205	ENST00000527920	ZBTB48	P10074	688 aa	Predicted RBP	40.66	■■■■■ 4.1
SSSCA1-205	ENST00000527920	TM4SF4	P48230	202 aa		40.66	■■■■■ 4.1

Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms