RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 A0A1W2PQ64 194 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 A0A1W2PQD8 194 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 WASLO00401 505 aaPredicted RBP14.28□□□□□ -0.12
TSKU-203ENST00000527881 GBP6Q6ZN66 633 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 HNRNPLLQ8WVV9 542 aaKnown RBP14.28□□□□□ -0.12
TSKU-203ENST00000527881 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 SOWAHDA6NJG2 315 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 PFKFB2O60825 505 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 PLEKHO1Q53GL0 409 aaPredicted RBP14.28□□□□□ -0.12
TSKU-203ENST00000527881 TXNDC2Q86VQ3 553 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 PPFIBP1Q86W92 1011 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 JPH2Q9BR39 696 aaPredicted RBP14.28□□□□□ -0.12
TSKU-203ENST00000527881 RTEL1Q9NZ71 1219 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 CHPF2Q9P2E5 772 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 SHTN1A0MZ66 631 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
TSKU-203ENST00000527881 INPP5BP32019 993 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 SPECC1LQ69YQ0 1117 aa14.28□□□□□ -0.12
TSKU-203ENST00000527881 RIN2Q8WYP3 895 aaPredicted RBP14.28□□□□□ -0.12
TSKU-203ENST00000527881 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
TSKU-203ENST00000527881 USP42Q9H9J4 1324 aaKnown RBP14.27□□□□□ -0.12
TSKU-203ENST00000527881 GNAT3A8MTJ3 354 aa14.27□□□□□ -0.12
TSKU-203ENST00000527881 CPLX1O14810 134 aa14.27□□□□□ -0.12
TSKU-203ENST00000527881 HNRNPH1P31943 449 aaKnown RBP14.27□□□□□ -0.12
TSKU-203ENST00000527881 STK11IPQ8N1F8 1099 aa14.27□□□□□ -0.12
TSKU-203ENST00000527881 DONSONQ9NYP3 566 aa14.27□□□□□ -0.12
TSKU-203ENST00000527881 HOOK1Q9UJC3 728 aaKnown RBP14.27□□□□□ -0.12
TSKU-203ENST00000527881 LRRIQ3A6PVS8 624 aaPredicted RBP14.27□□□□□ -0.13
TSKU-203ENST00000527881 CYP21A2P08686 494 aa14.27□□□□□ -0.13
TSKU-203ENST00000527881 SMARCC2Q8TAQ2 1214 aa14.27□□□□□ -0.13
TSKU-203ENST00000527881 FAM169AQ9Y6X4 670 aa14.27□□□□□ -0.13
TSKU-203ENST00000527881 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.13
TSKU-203ENST00000527881 ALDH8A1Q9H2A2 487 aaPredicted RBP14.27□□□□□ -0.13
TSKU-203ENST00000527881 CENPHQ9H3R5 247 aa14.27□□□□□ -0.13
TSKU-203ENST00000527881 KIAA0754O94854 1291 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 SWT1Q5T5J6 900 aaKnown RBP14.26□□□□□ -0.13
TSKU-203ENST00000527881 CCDC148Q8NFR7 591 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 CTDNEP1O95476 244 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 CHGBP05060 677 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 DHX32Q7L7V1 743 aaKnown RBP14.26□□□□□ -0.13
TSKU-203ENST00000527881 GJB4Q9NTQ9 266 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 EXOC5O00471 708 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 TTC19Q6DKK2 380 aaPredicted RBP14.26□□□□□ -0.13
TSKU-203ENST00000527881 SLC35F6Q8N357 371 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 IGSF22Q8N9C0 903 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 BCAS4Q8TDM0 211 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 KAT2BQ92831 832 aa14.26□□□□□ -0.13
TSKU-203ENST00000527881 FRMPD1Q5SYB0 1578 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 TUBGCP6Q96RT7 1819 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 CCDC196A0A1B0GTZ2 297 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 ILDR1Q86SU0 546 aaPredicted RBP14.25□□□□□ -0.13
TSKU-203ENST00000527881 TMEM139Q8IV31 216 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 TC2NQ8N9U0 490 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 FAM76AQ8TAV0 307 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 CDC5LQ99459 802 aaKnown RBP14.25□□□□□ -0.13
TSKU-203ENST00000527881 NFE2L3Q9Y4A8 694 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 CAPN7Q9Y6W3 813 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 NPHP4O75161 1426 aaPredicted RBP14.25□□□□□ -0.13
TSKU-203ENST00000527881 BEND3Q5T5X7 828 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 CLIC6Q96NY7 704 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 SAMM50Q9Y512 469 aa14.25□□□□□ -0.13
TSKU-203ENST00000527881 A0A0U1RQJ8 604 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 PIP4K2BP78356 416 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
TSKU-203ENST00000527881 ATRIPQ8WXE1 791 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 AKR1B15C9JRZ8 316 aaPredicted RBP14.24□□□□□ -0.13
TSKU-203ENST00000527881 ZMYND10O75800 440 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 USP5P45974 858 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 MAP9Q49MG5 647 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 RAB21Q9UL25 225 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 ALDH1L1O75891 902 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 YEATS4O95619 227 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 STIM1Q13586 685 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 MYSM1Q5VVJ2 828 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 ANO1Q5XXA6 986 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 DDX46Q7L014 1031 aaKnown RBP14.24□□□□□ -0.13
TSKU-203ENST00000527881 NOA1Q8NC60 698 aaKnown RBP14.24□□□□□ -0.13
TSKU-203ENST00000527881 MSANTD4Q8NCY6 345 aa14.24□□□□□ -0.13
TSKU-203ENST00000527881 CTCFLQ8NI51 663 aaPredicted RBP14.24□□□□□ -0.13
TSKU-203ENST00000527881 GOLGA6CA6NDK9 693 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 CPP00450 1065 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
TSKU-203ENST00000527881 GOLGA6DP0CG33 693 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 PPP2R5AQ15172 486 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 LONRF3Q496Y0 759 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 NCAPH2Q6IBW4 605 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 NAPGQ99747 312 aaPredicted RBP14.23□□□□□ -0.13
TSKU-203ENST00000527881 HINFPQ9BQA5 517 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 HSD3B7Q9H2F3 369 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 GOLGA6AQ9NYA3 693 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 RPAINQ86UA6 219 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 CMA1P23946 247 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 ZNF827Q17R98 1081 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 KLHL10Q6JEL2 608 aa14.23□□□□□ -0.13
TSKU-203ENST00000527881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.23□□□□□ -0.13
TSKU-203ENST00000527881 KIF1CO43896 1103 aaKnown RBP14.22□□□□□ -0.13
TSKU-203ENST00000527881 SASH1O94885 1247 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms