RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GPHNQ9NQX3 736 aaPredicted RBP17.96■□□□□ 0.47
USH1C-207ENST00000527720 ANGEL1Q9UNK9 670 aaKnown RBP17.96■□□□□ 0.47
USH1C-207ENST00000527720 IGHMBP2P38935 993 aaKnown RBP17.95■□□□□ 0.46
USH1C-207ENST00000527720 ITPK1Q13572 414 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 TMEM87BQ96K49 555 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 USP28Q96RU2 1077 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.95■□□□□ 0.46
USH1C-207ENST00000527720 CPLX1O14810 134 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 TPM3P06753 285 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 SASS6Q6UVJ0 657 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 HELBQ8NG08 1087 aaPredicted RBP17.95■□□□□ 0.46
USH1C-207ENST00000527720 ACSBG1Q96GR2 724 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 C8orf76Q96K31 380 aa17.95■□□□□ 0.46
USH1C-207ENST00000527720 BRAPQ7Z569 592 aa17.94■□□□□ 0.46
USH1C-207ENST00000527720 ILDR1Q86SU0 546 aaPredicted RBP17.94■□□□□ 0.46
USH1C-207ENST00000527720 TBC1D10CQ8IV04 446 aa17.94■□□□□ 0.46
USH1C-207ENST00000527720 CKAP2LQ8IYA6 745 aa17.94■□□□□ 0.46
USH1C-207ENST00000527720 FBXO18Q8NFZ0 1043 aa17.94■□□□□ 0.46
USH1C-207ENST00000527720 RTEL1Q9NZ71 1219 aa17.94■□□□□ 0.46
USH1C-207ENST00000527720 ORC3Q9UBD5 711 aaPredicted RBP17.94■□□□□ 0.46
USH1C-207ENST00000527720 NIP7Q9Y221 180 aaKnown RBP eCLIP17.94■□□□□ 0.46
USH1C-207ENST00000527720 PATL2C9JE40 543 aaKnown RBP17.93■□□□□ 0.46
USH1C-207ENST00000527720 APPP05067 770 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 KIAA2012Q0VF49 1180 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 RASGRF1Q13972 1273 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 CLEC4GQ6UXB4 293 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 ECM29Q5VYK3 1845 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 SH2B2O14492 632 aaPredicted RBP17.93■□□□□ 0.46
USH1C-207ENST00000527720 CDKL5O76039 1030 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 TPM2P07951 284 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 FOSBP53539 338 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 CCDC73Q6ZRK6 1079 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 CCAR1Q8IX12 1150 aaKnown RBP17.93■□□□□ 0.46
USH1C-207ENST00000527720 SEC31BQ9NQW1 1179 aa17.93■□□□□ 0.46
USH1C-207ENST00000527720 RGL2O15211 777 aa17.92■□□□□ 0.46
USH1C-207ENST00000527720 GNAT2P19087 354 aa17.92■□□□□ 0.46
USH1C-207ENST00000527720 CEBPZQ03701 1054 aaKnown RBP17.92■□□□□ 0.46
USH1C-207ENST00000527720 ANO6Q4KMQ2 910 aa17.92■□□□□ 0.46
USH1C-207ENST00000527720 A0A0G2JS52 829 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 GOLGA6L6A8MZA4 724 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 GUCY1B3Q02153 619 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 CYB5R4Q7L1T6 521 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 MAGEB6Q8N7X4 407 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 CDC5LQ99459 802 aaKnown RBP17.91■□□□□ 0.46
USH1C-207ENST00000527720 CNNM2Q9H8M5 875 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 CBX8Q9HC52 389 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 POLR3EQ9NVU0 708 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 BCL9LQ86UU0 1499 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 PNPLA7Q6ZV29 1317 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 A0A1W2PQ27 194 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 A0A1W2PQ64 194 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 A0A1W2PQD8 194 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 YEATS4O95619 227 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 ADALQ6DHV7 355 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 CPLX2Q6PUV4 134 aaKnown RBP17.91■□□□□ 0.46
USH1C-207ENST00000527720 SGMS1Q86VZ5 419 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 IFNL3Q8IZI9 196 aa17.91■□□□□ 0.46
USH1C-207ENST00000527720 TDRD7Q8NHU6 1098 aaKnown RBP17.91■□□□□ 0.46
USH1C-207ENST00000527720 FAM177BA6PVY3 158 aa17.9■□□□□ 0.46
USH1C-207ENST00000527720 AP5Z1O43299 807 aa17.9■□□□□ 0.46
USH1C-207ENST00000527720 ME1P48163 572 aa17.9■□□□□ 0.46
USH1C-207ENST00000527720 METAP2P50579 478 aaKnown RBP eCLIP17.9■□□□□ 0.46
USH1C-207ENST00000527720 SNW1Q13573 536 aaKnown RBP17.9■□□□□ 0.46
USH1C-207ENST00000527720 ENGASEQ8NFI3 743 aa17.9■□□□□ 0.46
USH1C-207ENST00000527720 KCNG4Q8TDN1 519 aa17.9■□□□□ 0.46
USH1C-207ENST00000527720 FTOQ9C0B1 505 aaKnown RBP eCLIP17.9■□□□□ 0.46
USH1C-207ENST00000527720 NAPBQ9H115 298 aa17.9■□□□□ 0.46
USH1C-207ENST00000527720 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
USH1C-207ENST00000527720 MBD4O95243 580 aa17.89■□□□□ 0.46
USH1C-207ENST00000527720 LIFRP42702 1097 aa17.89■□□□□ 0.46
USH1C-207ENST00000527720 PLCB2Q00722 1185 aa17.89■□□□□ 0.46
USH1C-207ENST00000527720 APOA5Q6Q788 366 aa17.89■□□□□ 0.46
USH1C-207ENST00000527720 B4E1Z4 1266 aa17.89■□□□□ 0.45
USH1C-207ENST00000527720 KINO60870 393 aaKnown RBP17.89■□□□□ 0.45
USH1C-207ENST00000527720 CHRNDQ07001 517 aa17.89■□□□□ 0.45
USH1C-207ENST00000527720 LINC00301Q8NCQ3 95 aa17.89■□□□□ 0.45
USH1C-207ENST00000527720 IGDCC4Q8TDY8 1250 aa17.89■□□□□ 0.45
USH1C-207ENST00000527720 PIBF1Q8WXW3 757 aa17.89■□□□□ 0.45
USH1C-207ENST00000527720 MTA3Q9BTC8 594 aa17.89■□□□□ 0.45
USH1C-207ENST00000527720 KRT23Q9C075 422 aa17.89■□□□□ 0.45
USH1C-207ENST00000527720 ZNF165P49910 485 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 MYSM1Q5VVJ2 828 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 LUZP1Q86V48 1076 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 MRPS27Q92552 414 aaKnown RBP17.88■□□□□ 0.45
USH1C-207ENST00000527720 NACAP1Q9BZK3 213 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 GOLPH3LQ9H4A5 285 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 EPB41L4AQ9HCS5 686 aaPredicted RBP17.88■□□□□ 0.45
USH1C-207ENST00000527720 NEDD4P46934 1319 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 PCDHA7Q9UN72 937 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 NID2Q14112 1375 aa17.88■□□□□ 0.45
USH1C-207ENST00000527720 GSG1L2A8MUP6 293 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 BCAMP50895 628 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 KIF23Q02241 960 aaPredicted RBP17.87■□□□□ 0.45
USH1C-207ENST00000527720 STX1AQ16623 288 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 AKNAD1Q5T1N1 836 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms