RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 KIAA0825Q8IV33 1275 aa28.41■■■□□ 2.14
LRRK1-206ENST00000527698 CERS5Q8N5B7 392 aa28.41■■■□□ 2.14
LRRK1-206ENST00000527698 SPATA5Q8NB90 893 aa28.41■■■□□ 2.14
LRRK1-206ENST00000527698 GPATCH3Q96I76 525 aa28.4■■■□□ 2.14
LRRK1-206ENST00000527698 MYOZ2Q9NPC6 264 aa28.4■■■□□ 2.14
LRRK1-206ENST00000527698 SMC5Q8IY18 1101 aa28.39■■■□□ 2.14
LRRK1-206ENST00000527698 MTMR14Q8NCE2 650 aa28.39■■■□□ 2.14
LRRK1-206ENST00000527698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.39■■■□□ 2.14
LRRK1-206ENST00000527698 MXD3Q9BW11 206 aa28.39■■■□□ 2.14
LRRK1-206ENST00000527698 SERPINA10Q9UK55 444 aa28.39■■■□□ 2.14
LRRK1-206ENST00000527698 HMG20BQ9P0W2 317 aa28.38■■■□□ 2.13
LRRK1-206ENST00000527698 TTF2Q9UNY4 1162 aaKnown RBP28.38■■■□□ 2.13
LRRK1-206ENST00000527698 JAG2Q9Y219 1238 aa28.38■■■□□ 2.13
LRRK1-206ENST00000527698 LDHBP07195 334 aaKnown RBP28.37■■■□□ 2.13
LRRK1-206ENST00000527698 LBX1P52954 281 aa28.37■■■□□ 2.13
LRRK1-206ENST00000527698 KIF4BQ2VIQ3 1234 aa28.37■■■□□ 2.13
LRRK1-206ENST00000527698 PGAP2Q9UHJ9 254 aa28.37■■■□□ 2.13
LRRK1-206ENST00000527698 AKAP11Q9UKA4 1901 aa28.37■■■□□ 2.13
LRRK1-206ENST00000527698 ECE1P42892 770 aa28.36■■■□□ 2.13
LRRK1-206ENST00000527698 MCAMP43121 646 aa28.36■■■□□ 2.13
LRRK1-206ENST00000527698 SAMD7Q7Z3H4 446 aa28.36■■■□□ 2.13
LRRK1-206ENST00000527698 SLF2Q8IX21 1173 aa28.36■■■□□ 2.13
LRRK1-206ENST00000527698 TLR7Q9NYK1 1049 aaKnown RBP28.36■■■□□ 2.13
LRRK1-206ENST00000527698 HSPA8P11142 646 aaKnown RBP28.35■■■□□ 2.13
LRRK1-206ENST00000527698 DLGAP5Q15398 846 aa28.35■■■□□ 2.13
LRRK1-206ENST00000527698 ANKRD45Q5TZF3 282 aa28.35■■■□□ 2.13
LRRK1-206ENST00000527698 CST9Q5W186 159 aa28.35■■■□□ 2.13
LRRK1-206ENST00000527698 TMED8Q6PL24 325 aaPredicted RBP28.35■■■□□ 2.13
LRRK1-206ENST00000527698 COL1A1P02452 1464 aaPredicted RBP28.34■■■□□ 2.13
LRRK1-206ENST00000527698 MYO1BO43795 1136 aa28.34■■■□□ 2.13
LRRK1-206ENST00000527698 SMARCA5O60264 1052 aaPredicted RBP28.34■■■□□ 2.13
LRRK1-206ENST00000527698 FMR1Q06787 632 aaKnown RBP eCLIP28.34■■■□□ 2.13
LRRK1-206ENST00000527698 TBC1D10BQ4KMP7 808 aaPredicted RBP28.34■■■□□ 2.13
LRRK1-206ENST00000527698 ERICH6BQ5W0A0 696 aa28.34■■■□□ 2.13
LRRK1-206ENST00000527698 CAPNS2Q96L46 248 aa28.34■■■□□ 2.13
LRRK1-206ENST00000527698 TLL2Q9Y6L7 1015 aa28.34■■■□□ 2.13
LRRK1-206ENST00000527698 F8W031 263 aaPredicted RBP28.33■■■□□ 2.13
LRRK1-206ENST00000527698 IGHDP01880 384 aa28.33■■■□□ 2.13
LRRK1-206ENST00000527698 ATP5JP18859 108 aa28.33■■■□□ 2.13
LRRK1-206ENST00000527698 RBM26Q5T8P6 1007 aaKnown RBP28.33■■■□□ 2.13
LRRK1-206ENST00000527698 HHIPL2Q6UWX4 724 aa28.33■■■□□ 2.13
LRRK1-206ENST00000527698 ERICH6Q7L0X2 663 aa28.33■■■□□ 2.13
LRRK1-206ENST00000527698 TEKT1Q969V4 418 aa28.33■■■□□ 2.13
LRRK1-206ENST00000527698 SHTN1A0MZ66 631 aa28.32■■■□□ 2.12
LRRK1-206ENST00000527698 TRAF5O00463 557 aa28.32■■■□□ 2.12
LRRK1-206ENST00000527698 TTF1Q15361 905 aaPredicted RBP28.32■■■□□ 2.12
LRRK1-206ENST00000527698 TRPM4Q8TD43 1214 aa28.32■■■□□ 2.12
LRRK1-206ENST00000527698 ECHDC1Q9NTX5 307 aa28.32■■■□□ 2.12
LRRK1-206ENST00000527698 ABCF2Q9UG63 623 aa28.32■■■□□ 2.12
LRRK1-206ENST00000527698 RBM5P52756 815 aaKnown RBP eCLIP28.31■■■□□ 2.12
LRRK1-206ENST00000527698 HIRAP54198 1017 aaPredicted RBP28.31■■■□□ 2.12
LRRK1-206ENST00000527698 DCPSQ96C86 337 aaKnown RBP28.31■■■□□ 2.12
LRRK1-206ENST00000527698 BCL11AQ9H165 835 aa28.31■■■□□ 2.12
LRRK1-206ENST00000527698 TTC41PQ6P2S7 1318 aa28.31■■■□□ 2.12
LRRK1-206ENST00000527698 PITPNM2Q9BZ72 1349 aa28.31■■■□□ 2.12
LRRK1-206ENST00000527698 ECM29Q5VYK3 1845 aa28.31■■■□□ 2.12
LRRK1-206ENST00000527698 GSTO1P78417 241 aa28.3■■■□□ 2.12
LRRK1-206ENST00000527698 SCARF1Q14162 830 aa28.3■■■□□ 2.12
LRRK1-206ENST00000527698 CFAP100Q494V2 611 aa28.3■■■□□ 2.12
LRRK1-206ENST00000527698 ZBED3Q96IU2 234 aaPredicted RBP28.3■■■□□ 2.12
LRRK1-206ENST00000527698 LRP2BPQ9P2M1 347 aa28.3■■■□□ 2.12
LRRK1-206ENST00000527698 WNT10BO00744 389 aa28.29■■■□□ 2.12
LRRK1-206ENST00000527698 ERC2O15083 957 aa28.29■■■□□ 2.12
LRRK1-206ENST00000527698 CRKP46108 304 aa28.29■■■□□ 2.12
LRRK1-206ENST00000527698 DZIP1Q86YF9 867 aaKnown RBP28.29■■■□□ 2.12
LRRK1-206ENST00000527698 SPDYE2BA6NHP3 402 aa28.28■■■□□ 2.12
LRRK1-206ENST00000527698 LDHCP07864 332 aa28.28■■■□□ 2.12
LRRK1-206ENST00000527698 SPDYE6P0CI01 402 aa28.28■■■□□ 2.12
LRRK1-206ENST00000527698 PRDX5P30044 214 aa28.28■■■□□ 2.12
LRRK1-206ENST00000527698 NUCB1Q02818 461 aa28.28■■■□□ 2.12
LRRK1-206ENST00000527698 CYP4F22Q6NT55 531 aa28.28■■■□□ 2.12
LRRK1-206ENST00000527698 PAXIP1Q6ZW49 1069 aaPredicted RBP28.28■■■□□ 2.12
LRRK1-206ENST00000527698 ZDHHC15Q96MV8 337 aa28.28■■■□□ 2.12
LRRK1-206ENST00000527698 BEGAINQ9BUH8 593 aa28.28■■■□□ 2.12
LRRK1-206ENST00000527698 EGFRP00533 1210 aa28.27■■■□□ 2.12
LRRK1-206ENST00000527698 CYP2E1P05181 493 aaPredicted RBP28.27■■■□□ 2.12
LRRK1-206ENST00000527698 MAP2K2P36507 400 aa28.27■■■□□ 2.12
LRRK1-206ENST00000527698 ZAP70P43403 619 aa28.27■■■□□ 2.12
LRRK1-206ENST00000527698 PI16Q6UXB8 463 aa28.27■■■□□ 2.12
LRRK1-206ENST00000527698 CDC37L1Q7L3B6 337 aa28.27■■■□□ 2.12
LRRK1-206ENST00000527698 FAM163AQ96GL9 167 aaPredicted RBP28.27■■■□□ 2.12
LRRK1-206ENST00000527698 HHIPL1Q96JK4 782 aa28.27■■■□□ 2.12
LRRK1-206ENST00000527698 SNRKQ9NRH2 765 aa28.27■■■□□ 2.12
LRRK1-206ENST00000527698 POLR2AP24928 1970 aaKnown RBP28.27■■■□□ 2.12
LRRK1-206ENST00000527698 MYH2Q9UKX2 1941 aa28.27■■■□□ 2.12
LRRK1-206ENST00000527698 SAPCD2Q86UD0 394 aa28.26■■■□□ 2.11
LRRK1-206ENST00000527698 CHD1LQ86WJ1 897 aa28.26■■■□□ 2.11
LRRK1-206ENST00000527698 MX1P20591 662 aa28.25■■■□□ 2.11
LRRK1-206ENST00000527698 GRIK5Q16478 980 aa28.25■■■□□ 2.11
LRRK1-206ENST00000527698 NBPF9Q3BBW0 867 aa28.25■■■□□ 2.11
LRRK1-206ENST00000527698 HAUS7Q99871 368 aa28.25■■■□□ 2.11
LRRK1-206ENST00000527698 RAI14Q9P0K7 980 aa28.25■■■□□ 2.11
LRRK1-206ENST00000527698 CELF2O95319 508 aaKnown RBP28.24■■■□□ 2.11
LRRK1-206ENST00000527698 MAP3K12Q12852 859 aa28.24■■■□□ 2.11
LRRK1-206ENST00000527698 APOBEC3FQ8IUX4 373 aaKnown RBP28.24■■■□□ 2.11
LRRK1-206ENST00000527698 SULF1Q8IWU6 871 aa28.24■■■□□ 2.11
LRRK1-206ENST00000527698 GLRX3O76003 335 aaKnown RBP28.23■■■□□ 2.11
LRRK1-206ENST00000527698 MAP4K4O95819 1239 aaPredicted RBP28.23■■■□□ 2.11
LRRK1-206ENST00000527698 MECOMQ03112 1051 aa28.23■■■□□ 2.11
LRRK1-206ENST00000527698 B4GALNT3Q6L9W6 998 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms