RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 GLYCTKQ8IVS8 523 aa5.52□□□□□ -1.53
CLNS1A-208ENST00000527265 PIK3R5Q8WYR1 880 aa5.52□□□□□ -1.53
CLNS1A-208ENST00000527265 BACH2Q9BYV9 841 aa5.52□□□□□ -1.53
CLNS1A-208ENST00000527265 BCL11AQ9H165 835 aa5.52□□□□□ -1.53
CLNS1A-208ENST00000527265 PAK6Q9NQU5 681 aaPredicted RBP5.52□□□□□ -1.53
CLNS1A-208ENST00000527265 NCANO14594 1321 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 ARID4BQ4LE39 1312 aaPredicted RBP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 FAM95CA0A1B0GW59 222 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 PRRG2O14669 202 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 SCAMP3O14828 347 aaKnown RBP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 DDX3YO15523 660 aaKnown RBP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 ZNF865P0CJ78 1059 aaPredicted RBP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 FKBP4Q02790 459 aaKnown RBP eCLIP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 HYAL2Q12891 473 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 MRPL58Q14197 206 aaKnown RBP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 PLCL1Q15111 1095 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 NFKBIBQ15653 356 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 SGO2Q562F6 1265 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 NFXL1Q6ZNB6 911 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 NLRP13Q86W25 1043 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 HELQQ8TDG4 1101 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 DNAJC2Q99543 621 aaKnown RBP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 TANGO6Q9C0B7 1094 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 LNPKQ9C0E8 428 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 SAP130Q9H0E3 1048 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 QTRT2Q9H974 415 aaKnown RBP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 DCTN4Q9UJW0 460 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 USP20Q9Y2K6 914 aa5.51□□□□□ -1.53
CLNS1A-208ENST00000527265 B8ZZF3 427 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 ADAM11O75078 769 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 PTPRAP18433 802 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 RAD51AP2Q09MP3 1159 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 SF3B2Q13435 895 aaKnown RBP5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 COL19A1Q14993 1142 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 C16orf46Q6P387 395 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 NOP9Q86U38 636 aaKnown RBP5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 CERS3Q8IU89 383 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 WNT8BQ93098 351 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 KLHDC7BQ96G42 594 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 TOX2Q96NM4 488 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 TINF2Q9BSI4 451 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 YIPF2Q9BWQ6 316 aa5.5□□□□□ -1.53
CLNS1A-208ENST00000527265 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 PIP4K2BP78356 416 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 ATP11AP98196 1134 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 EAPPQ56P03 285 aaPredicted RBP5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 COX20Q5RI15 118 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 DUSP27Q5VZP5 1158 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 NUTM2GQ5VZR2 741 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 ZSCAN29Q8IWY8 852 aaPredicted RBP5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 C12orf50Q8NA57 414 aaPredicted RBP5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 ZSCAN18Q8TBC5 510 aaPredicted RBP5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 FAM168AQ92567 244 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 TBC1D32Q96NH3 1257 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 ADAM19Q9H013 955 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 BRPF3Q9ULD4 1205 aa5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 TMA7Q9Y2S6 64 aaKnown RBP5.49□□□□□ -1.53
CLNS1A-208ENST00000527265 TNFRSF10BO14763 440 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 OPLAHO14841 1288 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 MARCH6O60337 910 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 EPHA1P21709 976 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 ARL4DP49703 201 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 USP11P51784 963 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 NLRP12P59046 1061 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 ECM1Q16610 540 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 LDLRAD1Q5T700 205 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 NOL8Q76FK4 1167 aaKnown RBP5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 TREML1Q86YW5 311 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 TMEM40Q8WWA1 233 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 MYO19Q96H55 970 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 CYP4F12Q9HCS2 524 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 OSGEPQ9NPF4 335 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 LRFN2Q9ULH4 789 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 SLC5A6Q9Y289 635 aa5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
CLNS1A-208ENST00000527265 H3BRJ5 948 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 TM4SF5O14894 197 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 FAM13AO94988 1023 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 MPSTP25325 297 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 ARHGAP4P98171 946 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 CYP27A1Q02318 531 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 ZNF792Q3KQV3 632 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 ATG4DQ86TL0 474 aaPredicted RBP5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 STK11IPQ8N1F8 1099 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 BHLHE22Q8NFJ8 381 aaPredicted RBP5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 OR13H1Q8NG92 308 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 DHX38Q92620 1227 aaKnown RBP5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 FAM84AQ96KN4 292 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 STIM2Q9P246 746 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 KCNMB2Q9Y691 235 aa5.47□□□□□ -1.53
CLNS1A-208ENST00000527265 MEGF11A6BM72 1044 aa5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 P4HBP07237 508 aaKnown RBP5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 NPR3P17342 541 aa5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 ZAR1Q86SH2 424 aa5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 METTL16Q86W50 562 aaKnown RBP5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 NT5DC4Q86YG4 428 aa5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 MICAL1Q8TDZ2 1067 aa5.46□□□□□ -1.54
CLNS1A-208ENST00000527265 RASSF4Q9H2L5 321 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms