RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 GNAI3P08754 354 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 SLC5A1P13866 664 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 ADORA1P30542 326 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 IL15P40933 162 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 MTX1Q13505 466 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 RASA3Q14644 834 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 ARMC9Q7Z3E5 817 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 TEPSINQ96N21 525 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 CEP126Q9P2H0 1117 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 PPP2R3BQ9Y5P8 575 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 ARAP2Q8WZ64 1704 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 SRGAP3O43295 1099 aa13□□□□□ -0.33
PRPF40B-204ENST00000527253 USP2O75604 605 aaPredicted RBP13□□□□□ -0.33
PRPF40B-204ENST00000527253 HDLBPQ00341 1268 aaKnown RBP13□□□□□ -0.33
PRPF40B-204ENST00000527253 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
PRPF40B-204ENST00000527253 MAP3K11Q16584 847 aa13□□□□□ -0.33
PRPF40B-204ENST00000527253 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
PRPF40B-204ENST00000527253 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
PRPF40B-204ENST00000527253 SAGE1Q9NXZ1 904 aa13□□□□□ -0.33
PRPF40B-204ENST00000527253 HDAC5Q9UQL6 1122 aa13□□□□□ -0.33
PRPF40B-204ENST00000527253 TCP10L2B9ZVM9 353 aa12.99□□□□□ -0.33
PRPF40B-204ENST00000527253 PHKA1P46020 1223 aa12.99□□□□□ -0.33
PRPF40B-204ENST00000527253 CACNB3P54284 484 aa12.99□□□□□ -0.33
PRPF40B-204ENST00000527253 TIMM10P62072 90 aa12.99□□□□□ -0.33
PRPF40B-204ENST00000527253 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-204ENST00000527253 MRIQ9BWK5 157 aa12.99□□□□□ -0.33
PRPF40B-204ENST00000527253 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 GNAI2P04899 355 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 RLBP1P12271 317 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 TM4SF4P48230 202 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 TFCP2Q12800 502 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 SUPT20HL1Q3ZLR7 823 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 SPRYD7Q5W111 196 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 TEKT1Q969V4 418 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 ABHD8Q96I13 439 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 ZDHHC15Q96MV8 337 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 TMEM39BQ9GZU3 492 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 AKAP11Q9UKA4 1901 aa12.98□□□□□ -0.33
PRPF40B-204ENST00000527253 CCDC102BQ68D86 513 aa12.97□□□□□ -0.33
PRPF40B-204ENST00000527253 HHIPL2Q6UWX4 724 aa12.97□□□□□ -0.33
PRPF40B-204ENST00000527253 WDR66Q8TBY9 1149 aa12.97□□□□□ -0.33
PRPF40B-204ENST00000527253 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-204ENST00000527253 A0A1B0GUL7 405 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 ZBTB22O15209 634 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 TBC1D8O95759 1140 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 PRDX5P30044 214 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 GJA5P36382 358 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 DIXDC1Q155Q3 683 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 SLC10A4Q96EP9 437 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 MCOLN1Q9GZU1 580 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 R3HDMLQ9H3Y0 253 aa12.96□□□□□ -0.33
PRPF40B-204ENST00000527253 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 TNFAIP1Q13829 316 aa12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 RASGRF1Q13972 1273 aa12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 POLA2Q14181 598 aa12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 XAGE2Q96GT9 111 aa12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
PRPF40B-204ENST00000527253 MAST3O60307 1309 aa12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 SALL1Q9NSC2 1324 aa12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 MYH13Q9UKX3 1938 aa12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 SEMA3EO15041 775 aa12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 IREB2P48200 963 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 ATP8B2P98198 1209 aa12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 DGKZQ13574 1117 aa12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 CDC42EP5Q6NZY7 148 aa12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
PRPF40B-204ENST00000527253 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 TNNI2P48788 182 aa12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 NFIAQ12857 509 aa12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 ANKRD13AQ8IZ07 590 aa12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 SSH3Q8TE77 659 aa12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 ELP3Q9H9T3 547 aa12.93□□□□□ -0.34
PRPF40B-204ENST00000527253 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 IGF2BP3O00425 579 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 ZBTB48P10074 688 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 PI16Q6UXB8 463 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 FAM83AQ86UY5 434 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 ITPRIPQ8IWB1 547 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 ZFPM1Q8IX07 1006 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 PANK1Q8TE04 598 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 ZNF384Q8TF68 577 aa12.92□□□□□ -0.34
PRPF40B-204ENST00000527253 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms