RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 LRRFIP1Q32MZ4 808 aaKnown RBP10.78□□□□□ -0.68
SCN3B-203ENST00000527125 ARHGAP29Q52LW3 1261 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 PLEKHO1Q53GL0 409 aaPredicted RBP10.78□□□□□ -0.68
SCN3B-203ENST00000527125 FEZ2Q9UHY8 353 aaPredicted RBP10.78□□□□□ -0.68
SCN3B-203ENST00000527125 MYH2Q9UKX2 1941 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 MAST3O60307 1309 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 KCPQ6ZWJ8 1503 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 ZNF202O95125 648 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 ANTXR2P58335 489 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.68
SCN3B-203ENST00000527125 TMC6Q7Z403 805 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 BRAPQ7Z569 592 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 ABTB2Q8N961 1025 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.68
SCN3B-203ENST00000527125 NCOA5Q9HCD5 579 aaKnown RBP10.77□□□□□ -0.68
SCN3B-203ENST00000527125 MYH3P11055 1940 aa10.77□□□□□ -0.69
SCN3B-203ENST00000527125 RPS6KA5O75582 802 aa10.77□□□□□ -0.69
SCN3B-203ENST00000527125 ATP1A3P13637 1013 aa10.77□□□□□ -0.69
SCN3B-203ENST00000527125 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.69
SCN3B-203ENST00000527125 FOXP4Q8IVH2 680 aaPredicted RBP10.77□□□□□ -0.69
SCN3B-203ENST00000527125 MED15Q96RN5 788 aa10.77□□□□□ -0.69
SCN3B-203ENST00000527125 NDUFB9Q9Y6M9 179 aa10.77□□□□□ -0.69
SCN3B-203ENST00000527125 BECN2A8MW95 431 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 PPP6R2O75170 966 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 USP5P45974 858 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 KIF23Q02241 960 aaPredicted RBP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 MAPK8IP2Q13387 824 aaPredicted RBP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 SLC39A14Q15043 492 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 CCP110O43303 1012 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 PFKFB1P16118 471 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 SARSP49591 514 aaKnown RBP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 SHC4Q6S5L8 630 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 HNRNPLLQ8WVV9 542 aaKnown RBP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 LRRC59Q96AG4 307 aaKnown RBP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 MPHOSPH8Q99549 860 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 SFPQP23246 707 aaKnown RBP eCLIP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 ST5P78524 1137 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 CEBPZQ03701 1054 aaKnown RBP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 RAD51AP2Q09MP3 1159 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 TAF7LQ5H9L4 462 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 RESP18Q5W5W9 173 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 GPR161Q8N6U8 529 aaKnown RBP10.76□□□□□ -0.69
SCN3B-203ENST00000527125 SMARCE1Q969G3 411 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 NBPF3Q9H094 633 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 RAB21Q9UL25 225 aa10.76□□□□□ -0.69
SCN3B-203ENST00000527125 DDX58O95786 925 aaKnown RBP10.75□□□□□ -0.69
SCN3B-203ENST00000527125 TEFQ10587 303 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 MLECQ14165 292 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 TC2NQ8N9U0 490 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 SPATA20Q8TB22 786 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 SIL1Q9H173 461 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 MYH6P13533 1939 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 MEGF6O75095 1541 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 ABCC12Q96J65 1359 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 VGLL3A8MV65 326 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 H7C1W4 665 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 M0R2C6 588 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 SPTLC2O15270 562 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 TPM1P09493 284 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 KCNA6P17658 529 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 METTL16Q86W50 562 aaKnown RBP10.75□□□□□ -0.69
SCN3B-203ENST00000527125 KCNH5Q8NCM2 988 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 NKX2-3Q8TAU0 364 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 MYH8P13535 1937 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 PBX1P40424 430 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 WDR24Q96S15 920 aa10.75□□□□□ -0.69
SCN3B-203ENST00000527125 RREB1Q92766 1687 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 TMEM232C9JQI7 657 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 CDC27P30260 824 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 ME1P48163 572 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 ANO1Q5XXA6 986 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 ZNF790Q6PG37 636 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 MSANTD4Q8NCY6 345 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 SYTL4Q96C24 671 aaPredicted RBP10.74□□□□□ -0.69
SCN3B-203ENST00000527125 DNAJC2Q99543 621 aaKnown RBP10.74□□□□□ -0.69
SCN3B-203ENST00000527125 C19orf44Q9H6X5 657 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 PPP2R2CQ9Y2T4 447 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 ARHGAP6O43182 974 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 SEC31AO94979 1220 aaKnown RBP10.74□□□□□ -0.69
SCN3B-203ENST00000527125 RABGGTAQ92696 567 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
SCN3B-203ENST00000527125 GPHNQ9NQX3 736 aaPredicted RBP10.74□□□□□ -0.69
SCN3B-203ENST00000527125 TOGARAM1Q9Y4F4 1720 aa10.74□□□□□ -0.69
SCN3B-203ENST00000527125 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
SCN3B-203ENST00000527125 CCT2P78371 535 aaKnown RBP10.73□□□□□ -0.69
SCN3B-203ENST00000527125 PDE4BQ07343 736 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 CHMP4CQ96CF2 233 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 PAG1Q9NWQ8 432 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 PHF8Q9UPP1 1060 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 A0A1B0GUL6 1792 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 H3BQF6 201 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 STX10O60499 249 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 DDX46Q7L014 1031 aaKnown RBP10.73□□□□□ -0.69
SCN3B-203ENST00000527125 XAGE3Q8WTP9 111 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 SLC52A2Q9HAB3 445 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 NTRK3Q16288 839 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 TXLNBQ8N3L3 684 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms