RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 KIF1BPQ96EK5 621 aa17.69■□□□□ 0.42
NXF1-204ENST00000527064 CDCA5Q96FF9 252 aa17.69■□□□□ 0.42
NXF1-204ENST00000527064 RASSF10A6NK89 507 aa17.68■□□□□ 0.42
NXF1-204ENST00000527064 RAB11FIP3O75154 756 aa17.68■□□□□ 0.42
NXF1-204ENST00000527064 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
NXF1-204ENST00000527064 GRIK5Q16478 980 aa17.68■□□□□ 0.42
NXF1-204ENST00000527064 TTC39AQ5SRH9 613 aa17.68■□□□□ 0.42
NXF1-204ENST00000527064 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
NXF1-204ENST00000527064 PRMT6Q96LA8 375 aaPredicted RBP17.68■□□□□ 0.42
NXF1-204ENST00000527064 PPP2R3BQ9Y5P8 575 aa17.68■□□□□ 0.42
NXF1-204ENST00000527064 TLL2Q9Y6L7 1015 aa17.68■□□□□ 0.42
NXF1-204ENST00000527064 NF2P35240 595 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 HHIPL2Q6UWX4 724 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 C2orf69Q8N8R5 385 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 SPATA5Q8NB90 893 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 RHPN1Q8TCX5 695 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 ZDHHC15Q96MV8 337 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 DBNDD2Q9BQY9 259 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 VEZTQ9HBM0 779 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 MKRN1Q9UHC7 482 aaKnown RBP17.67■□□□□ 0.42
NXF1-204ENST00000527064 PCDHAC2Q9Y5I4 1007 aa17.67■□□□□ 0.42
NXF1-204ENST00000527064 POLR2AP24928 1970 aaKnown RBP17.66■□□□□ 0.42
NXF1-204ENST00000527064 CLRN2A0PK11 232 aa17.66■□□□□ 0.42
NXF1-204ENST00000527064 PRDX5P30044 214 aa17.66■□□□□ 0.42
NXF1-204ENST00000527064 DEFB115Q30KQ5 88 aa17.66■□□□□ 0.42
NXF1-204ENST00000527064 SPDYE2Q495Y8 402 aa17.66■□□□□ 0.42
NXF1-204ENST00000527064 AACSQ86V21 672 aa17.66■□□□□ 0.42
NXF1-204ENST00000527064 CLASRPQ8N2M8 674 aaKnown RBP17.66■□□□□ 0.42
NXF1-204ENST00000527064 HHIPL1Q96JK4 782 aa17.66■□□□□ 0.42
NXF1-204ENST00000527064 GBA2Q9HCG7 927 aaPredicted RBP17.66■□□□□ 0.42
NXF1-204ENST00000527064 FKBP1BP68106 108 aa17.65■□□□□ 0.42
NXF1-204ENST00000527064 SAPCD2Q86UD0 394 aa17.65■□□□□ 0.42
NXF1-204ENST00000527064 DZIP1Q86YF9 867 aaKnown RBP17.65■□□□□ 0.42
NXF1-204ENST00000527064 SLF2Q8IX21 1173 aa17.65■□□□□ 0.42
NXF1-204ENST00000527064 EAF2Q96CJ1 260 aaPredicted RBP17.65■□□□□ 0.42
NXF1-204ENST00000527064 ZNF512BQ96KM6 892 aaPredicted RBP17.65■□□□□ 0.42
NXF1-204ENST00000527064 DEFB129Q9H1M3 183 aa17.65■□□□□ 0.42
NXF1-204ENST00000527064 TMOD2Q9NZR1 351 aa17.65■□□□□ 0.42
NXF1-204ENST00000527064 HMG20BQ9P0W2 317 aa17.65■□□□□ 0.42
NXF1-204ENST00000527064 ZNF70Q9UC06 446 aaPredicted RBP17.65■□□□□ 0.42
NXF1-204ENST00000527064 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
NXF1-204ENST00000527064 DBNLQ9UJU6 430 aaKnown RBP17.65■□□□□ 0.42
NXF1-204ENST00000527064 PAPPA2Q9BXP8 1791 aa17.65■□□□□ 0.42
NXF1-204ENST00000527064 APBB1O00213 710 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 ECE1P42892 770 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 MCAMP43121 646 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 TNNI2P48788 182 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 AAMPQ13685 434 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 DLK2Q6UY11 383 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 PAXIP1Q6ZW49 1069 aaPredicted RBP17.64■□□□□ 0.41
NXF1-204ENST00000527064 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 JMYQ8N9B5 988 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 CRBNQ96SW2 442 aa17.64■□□□□ 0.41
NXF1-204ENST00000527064 CCDC8Q9H0W5 538 aaPredicted RBP17.64■□□□□ 0.41
NXF1-204ENST00000527064 TDRD3Q9H7E2 651 aaKnown RBP17.64■□□□□ 0.41
NXF1-204ENST00000527064 SCAF8Q9UPN6 1271 aaKnown RBP17.64■□□□□ 0.41
NXF1-204ENST00000527064 IFIT2P09913 472 aaKnown RBP17.63■□□□□ 0.41
NXF1-204ENST00000527064 HUNKP57058 714 aa17.63■□□□□ 0.41
NXF1-204ENST00000527064 IL1RAPL2Q9NP60 686 aa17.63■□□□□ 0.41
NXF1-204ENST00000527064 TLR7Q9NYK1 1049 aaKnown RBP17.63■□□□□ 0.41
NXF1-204ENST00000527064 VEGFBP49765 207 aa17.62■□□□□ 0.41
NXF1-204ENST00000527064 DIXDC1Q155Q3 683 aa17.62■□□□□ 0.41
NXF1-204ENST00000527064 APOBEC3HQ6NTF7 200 aaKnown RBP17.62■□□□□ 0.41
NXF1-204ENST00000527064 PI16Q6UXB8 463 aa17.62■□□□□ 0.41
NXF1-204ENST00000527064 LRRCC1Q9C099 1032 aa17.62■□□□□ 0.41
NXF1-204ENST00000527064 DAGLAQ9Y4D2 1042 aa17.62■□□□□ 0.41
NXF1-204ENST00000527064 AOX1Q06278 1338 aa17.62■□□□□ 0.41
NXF1-204ENST00000527064 IGSF3O75054 1194 aa17.61■□□□□ 0.41
NXF1-204ENST00000527064 GSTO1P78417 241 aa17.61■□□□□ 0.41
NXF1-204ENST00000527064 SUPT20HL1Q3ZLR7 823 aa17.61■□□□□ 0.41
NXF1-204ENST00000527064 MAST2Q6P0Q8 1798 aa17.61■□□□□ 0.41
NXF1-204ENST00000527064 TTLL12Q14166 644 aaPredicted RBP17.6■□□□□ 0.41
NXF1-204ENST00000527064 RASA3Q14644 834 aa17.6■□□□□ 0.41
NXF1-204ENST00000527064 FKBP1CQ5VVH2 108 aa17.6■□□□□ 0.41
NXF1-204ENST00000527064 PRAMEF18Q5VWM3 479 aa17.6■□□□□ 0.41
NXF1-204ENST00000527064 CAPNS2Q96L46 248 aa17.6■□□□□ 0.41
NXF1-204ENST00000527064 RAI14Q9P0K7 980 aa17.6■□□□□ 0.41
NXF1-204ENST00000527064 LRP2BPQ9P2M1 347 aa17.6■□□□□ 0.41
NXF1-204ENST00000527064 GAKO14976 1311 aa17.6■□□□□ 0.41
NXF1-204ENST00000527064 WDR33Q9C0J8 1336 aaKnown RBP17.6■□□□□ 0.41
NXF1-204ENST00000527064 THSD7BQ9C0I4 1608 aa17.6■□□□□ 0.41
NXF1-204ENST00000527064 MROH7-TTC4A0A0A0MT08 1334 aa17.59■□□□□ 0.41
NXF1-204ENST00000527064 TCP10L2B9ZVM9 353 aa17.59■□□□□ 0.41
NXF1-204ENST00000527064 MECOMQ03112 1051 aa17.59■□□□□ 0.41
NXF1-204ENST00000527064 CYP4F22Q6NT55 531 aa17.59■□□□□ 0.41
NXF1-204ENST00000527064 ARMC9Q7Z3E5 817 aa17.59■□□□□ 0.41
NXF1-204ENST00000527064 DCTPP1Q9H773 170 aa17.59■□□□□ 0.41
NXF1-204ENST00000527064 SNRKQ9NRH2 765 aa17.59■□□□□ 0.41
NXF1-204ENST00000527064 PCDHB15Q9Y5E8 787 aa17.59■□□□□ 0.41
NXF1-204ENST00000527064 RPAP1Q9BWH6 1393 aaPredicted RBP17.58■□□□□ 0.4
NXF1-204ENST00000527064 LDHCP07864 332 aa17.58■□□□□ 0.4
NXF1-204ENST00000527064 RGMBQ6NW40 437 aa17.58■□□□□ 0.4
NXF1-204ENST00000527064 TBC1D9Q6ZT07 1266 aa17.58■□□□□ 0.4
NXF1-204ENST00000527064 FAM83AQ86UY5 434 aa17.58■□□□□ 0.4
NXF1-204ENST00000527064 FAM163AQ96GL9 167 aaPredicted RBP17.58■□□□□ 0.4
NXF1-204ENST00000527064 AKAP11Q9UKA4 1901 aa17.57■□□□□ 0.4
NXF1-204ENST00000527064 MYH2Q9UKX2 1941 aa17.57■□□□□ 0.4
NXF1-204ENST00000527064 PPP1R12BO60237 982 aaPredicted RBP17.57■□□□□ 0.4
NXF1-204ENST00000527064 CYP2E1P05181 493 aaPredicted RBP17.57■□□□□ 0.4
NXF1-204ENST00000527064 ZAP70P43403 619 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms