RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-205ENST00000527046 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-205ENST00000527046 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-205ENST00000527046 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-205ENST00000527046 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
NEDD8-205ENST00000527046 ADGRA1Q86SQ6 560 aa13.15□□□□□ -0.3
NEDD8-205ENST00000527046 NSUN4Q96CB9 384 aaKnown RBP13.15□□□□□ -0.3
NEDD8-205ENST00000527046 PGAP2Q9UHJ9 254 aa13.15□□□□□ -0.3
NEDD8-205ENST00000527046 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
NEDD8-205ENST00000527046 TTF2Q9UNY4 1162 aaKnown RBP13.15□□□□□ -0.3
NEDD8-205ENST00000527046 GOLIM4O00461 696 aa13.14□□□□□ -0.31
NEDD8-205ENST00000527046 EPHX2P34913 555 aa13.14□□□□□ -0.31
NEDD8-205ENST00000527046 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
NEDD8-205ENST00000527046 MECOMQ03112 1051 aa13.14□□□□□ -0.31
NEDD8-205ENST00000527046 DIXDC1Q155Q3 683 aa13.14□□□□□ -0.31
NEDD8-205ENST00000527046 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
NEDD8-205ENST00000527046 APOBEC3HQ6NTF7 200 aaKnown RBP13.14□□□□□ -0.31
NEDD8-205ENST00000527046 MTMR14Q8NCE2 650 aa13.14□□□□□ -0.31
NEDD8-205ENST00000527046 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-205ENST00000527046 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
NEDD8-205ENST00000527046 POLR2AP24928 1970 aaKnown RBP13.14□□□□□ -0.31
NEDD8-205ENST00000527046 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 WNT10BO00744 389 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 MAP4K4O95819 1239 aaPredicted RBP13.13□□□□□ -0.31
NEDD8-205ENST00000527046 GSPT1P15170 499 aaKnown RBP13.13□□□□□ -0.31
NEDD8-205ENST00000527046 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
NEDD8-205ENST00000527046 HHIPL2Q6UWX4 724 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 DNAJC2Q99543 621 aaKnown RBP13.13□□□□□ -0.31
NEDD8-205ENST00000527046 MYOZ2Q9NPC6 264 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
NEDD8-205ENST00000527046 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 SERPINA10Q9UK55 444 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 MYH2Q9UKX2 1941 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 GAKO14976 1311 aa13.13□□□□□ -0.31
NEDD8-205ENST00000527046 H7C1D1 291 aa13.12□□□□□ -0.31
NEDD8-205ENST00000527046 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
NEDD8-205ENST00000527046 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
NEDD8-205ENST00000527046 CRKP46108 304 aa13.12□□□□□ -0.31
NEDD8-205ENST00000527046 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
NEDD8-205ENST00000527046 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
NEDD8-205ENST00000527046 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
NEDD8-205ENST00000527046 ZDHHC15Q96MV8 337 aa13.12□□□□□ -0.31
NEDD8-205ENST00000527046 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
NEDD8-205ENST00000527046 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
NEDD8-205ENST00000527046 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
NEDD8-205ENST00000527046 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
NEDD8-205ENST00000527046 MMP14P50281 582 aa13.11□□□□□ -0.31
NEDD8-205ENST00000527046 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
NEDD8-205ENST00000527046 USP50Q70EL3 339 aaPredicted RBP13.11□□□□□ -0.31
NEDD8-205ENST00000527046 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
NEDD8-205ENST00000527046 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
NEDD8-205ENST00000527046 IQCA1LA6NCM1 817 aa13.1□□□□□ -0.31
NEDD8-205ENST00000527046 ERC2O15083 957 aa13.1□□□□□ -0.31
NEDD8-205ENST00000527046 RHBDL3P58872 404 aa13.1□□□□□ -0.31
NEDD8-205ENST00000527046 KIF4BQ2VIQ3 1234 aa13.1□□□□□ -0.31
NEDD8-205ENST00000527046 TTC22Q5TAA0 569 aa13.1□□□□□ -0.31
NEDD8-205ENST00000527046 SPTY2D1Q68D10 685 aaPredicted RBP13.1□□□□□ -0.31
NEDD8-205ENST00000527046 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
NEDD8-205ENST00000527046 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
NEDD8-205ENST00000527046 LRP2BPQ9P2M1 347 aa13.1□□□□□ -0.31
NEDD8-205ENST00000527046 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
NEDD8-205ENST00000527046 IGSF3O75054 1194 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 IDH1O75874 414 aaKnown RBP13.09□□□□□ -0.31
NEDD8-205ENST00000527046 PDE6AP16499 860 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 LMOD1P29536 600 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-205ENST00000527046 ADD2P35612 726 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 PPP4CP60510 307 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-205ENST00000527046 CDC42EP5Q6NZY7 148 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 OGFOD1Q8N543 542 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 MAGEB6Q8N7X4 407 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 TDRD3Q9H7E2 651 aaKnown RBP13.09□□□□□ -0.31
NEDD8-205ENST00000527046 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
NEDD8-205ENST00000527046 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
NEDD8-205ENST00000527046 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
NEDD8-205ENST00000527046 MYH7P12883 1935 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-205ENST00000527046 SDSP20132 328 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.32
NEDD8-205ENST00000527046 DLGAP5Q15398 846 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 SLC9C2Q5TAH2 1124 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-205ENST00000527046 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
NEDD8-205ENST00000527046 TEKT1Q969V4 418 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 RIOK1Q9BRS2 568 aaKnown RBP13.08□□□□□ -0.32
NEDD8-205ENST00000527046 ZNF70Q9UC06 446 aaPredicted RBP13.08□□□□□ -0.32
NEDD8-205ENST00000527046 ECM29Q5VYK3 1845 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 MROH7-TTC4A0A0A0MT08 1334 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 ZNF532Q9HCE3 1301 aa13.08□□□□□ -0.32
NEDD8-205ENST00000527046 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
NEDD8-205ENST00000527046 CYP7A1P22680 504 aa13.07□□□□□ -0.32
NEDD8-205ENST00000527046 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
NEDD8-205ENST00000527046 MAP3K12Q12852 859 aa13.07□□□□□ -0.32
NEDD8-205ENST00000527046 UBE3CQ15386 1083 aa13.07□□□□□ -0.32
NEDD8-205ENST00000527046 NAA16Q6N069 864 aaPredicted RBP13.07□□□□□ -0.32
NEDD8-205ENST00000527046 ZFPM1Q8IX07 1006 aa13.07□□□□□ -0.32
NEDD8-205ENST00000527046 OSBP2Q969R2 916 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms