RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 CLEC4MQ9H2X3 399 aaPredicted RBP6.91□□□□□ -1.3
CTR9-203ENST00000526874 C12orf49Q9H741 205 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 USP21Q9UK80 565 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 SPG7Q9UQ90 795 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 C1QTNF9BB2RNN3 333 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 DLL1O00548 723 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 ALX3O95076 343 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 APBA3O96018 575 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 ITGB2P05107 769 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 ERCC5P28715 1186 aaPredicted RBP6.9□□□□□ -1.3
CTR9-203ENST00000526874 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
CTR9-203ENST00000526874 GSTM4Q03013 218 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 C9orf131Q5VYM1 1079 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 CD163Q86VB7 1156 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 DTWD1Q8N5C7 304 aa6.9□□□□□ -1.3
CTR9-203ENST00000526874 GPN3Q9UHW5 284 aaPredicted RBP6.9□□□□□ -1.3
CTR9-203ENST00000526874 CD68P34810 354 aaPredicted RBP6.89□□□□□ -1.31
CTR9-203ENST00000526874 PIP4K2BP78356 416 aa6.89□□□□□ -1.31
CTR9-203ENST00000526874 C19orf57Q0VDD7 668 aa6.89□□□□□ -1.31
CTR9-203ENST00000526874 PSMD2Q13200 908 aa6.89□□□□□ -1.31
CTR9-203ENST00000526874 PLA2G4EQ3MJ16 856 aa6.89□□□□□ -1.31
CTR9-203ENST00000526874 TPTE2Q6XPS3 522 aa6.89□□□□□ -1.31
CTR9-203ENST00000526874 C3orf58Q8NDZ4 430 aa6.89□□□□□ -1.31
CTR9-203ENST00000526874 MICAL1Q8TDZ2 1067 aa6.89□□□□□ -1.31
CTR9-203ENST00000526874 ZNF526Q8TF50 670 aaPredicted RBP6.89□□□□□ -1.31
CTR9-203ENST00000526874 DNAJC2Q99543 621 aaKnown RBP6.89□□□□□ -1.31
CTR9-203ENST00000526874 USP26Q9BXU7 913 aa6.89□□□□□ -1.31
CTR9-203ENST00000526874 RAB11FIP3O75154 756 aa6.88□□□□□ -1.31
CTR9-203ENST00000526874 ECEL1O95672 775 aa6.88□□□□□ -1.31
CTR9-203ENST00000526874 EIF4BP23588 611 aaKnown RBP6.88□□□□□ -1.31
CTR9-203ENST00000526874 ACAD11Q709F0 780 aa6.88□□□□□ -1.31
CTR9-203ENST00000526874 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
CTR9-203ENST00000526874 PPP4R2Q9NY27 417 aa6.88□□□□□ -1.31
CTR9-203ENST00000526874 CTSBP07858 339 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 GSTT1P30711 240 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 ARL4DP49703 201 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 DAB2P98082 770 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 HDLBPQ00341 1268 aaKnown RBP6.87□□□□□ -1.31
CTR9-203ENST00000526874 SUZ12Q15022 739 aaKnown RBP6.87□□□□□ -1.31
CTR9-203ENST00000526874 MEI1Q5TIA1 1274 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 KLHL23Q8NBE8 558 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 GPATCH3Q96I76 525 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 FAM8A1Q9UBU6 413 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 TTF2Q9UNY4 1162 aaKnown RBP6.87□□□□□ -1.31
CTR9-203ENST00000526874 AK5Q9Y6K8 562 aa6.87□□□□□ -1.31
CTR9-203ENST00000526874 SBNO2Q9Y2G9 1366 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 B3GALT4O96024 378 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 DUOXA2Q1HG44 320 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 GPAT2Q6NUI2 795 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 IGF2-ASQ6U949 168 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 TRIM56Q9BRZ2 755 aaKnown RBP6.86□□□□□ -1.31
CTR9-203ENST00000526874 BACH2Q9BYV9 841 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 ZC3H12CQ9C0D7 883 aaKnown RBP6.86□□□□□ -1.31
CTR9-203ENST00000526874 SRA1Q9HD15 236 aaKnown RBP6.86□□□□□ -1.31
CTR9-203ENST00000526874 OSGEPQ9NPF4 335 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 VTI1BQ9UEU0 232 aa6.86□□□□□ -1.31
CTR9-203ENST00000526874 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTR9-203ENST00000526874 LOC102724159A0A0B4J2E5 919 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 DLGAP3O95886 979 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 CELA3AP09093 270 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 CTSHP09668 335 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 IREB2P48200 963 aaKnown RBP6.85□□□□□ -1.31
CTR9-203ENST00000526874 PTPN12Q05209 780 aaKnown RBP6.85□□□□□ -1.31
CTR9-203ENST00000526874 RAD51AP2Q09MP3 1159 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 PWP2Q15269 919 aaKnown RBP6.85□□□□□ -1.31
CTR9-203ENST00000526874 TMC4Q7Z404 712 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 NOP9Q86U38 636 aaKnown RBP6.85□□□□□ -1.31
CTR9-203ENST00000526874 ALYREFQ86V81 257 aaKnown RBP6.85□□□□□ -1.31
CTR9-203ENST00000526874 TICAM2Q86XR7 235 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 STK35Q8TDR2 534 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 WNT8BQ93098 351 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 LENG1Q96BZ8 264 aaPredicted RBP6.85□□□□□ -1.31
CTR9-203ENST00000526874 NACC1Q96RE7 527 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 PRDM16Q9HAZ2 1276 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 MRS2Q9HD23 443 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 RIPOR2Q9Y4F9 1068 aa6.85□□□□□ -1.31
CTR9-203ENST00000526874 C9orf172C9J069 976 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 GIPC1O14908 333 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 SORBS3O60504 671 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 PAGE1O75459 146 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 MAOBP27338 520 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 NOS3P29474 1203 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 FGD1P98174 961 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 ADGRE1Q14246 886 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 LDLRAD1Q5T700 205 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 KIAA1211Q6ZU35 1233 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
CTR9-203ENST00000526874 TANGO6Q9C0B7 1094 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 SRCIN1Q9C0H9 1055 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
CTR9-203ENST00000526874 SLC52A1Q9NWF4 448 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 SUGT1Q9Y2Z0 365 aa6.84□□□□□ -1.31
CTR9-203ENST00000526874 LOC100289279A0A1B0GTE1 492 aa6.83□□□□□ -1.32
CTR9-203ENST00000526874 F8W735 103 aaPredicted RBP6.83□□□□□ -1.32
CTR9-203ENST00000526874 XRCC5P13010 732 aaKnown RBP6.83□□□□□ -1.32
CTR9-203ENST00000526874 TAF7LQ5H9L4 462 aa6.83□□□□□ -1.32
CTR9-203ENST00000526874 WFDC12Q8WWY7 111 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms