RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 G2E3Q7L622 706 aa13.4□□□□□ -0.27
VPS11-202ENST00000526829 USP17L1Q7RTZ2 530 aa13.4□□□□□ -0.27
VPS11-202ENST00000526829 CLUAP1Q96AJ1 413 aa13.4□□□□□ -0.27
VPS11-202ENST00000526829 CACNA1FO60840 1977 aa13.39□□□□□ -0.27
VPS11-202ENST00000526829 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
VPS11-202ENST00000526829 WTIPA6NIX2 430 aaPredicted RBP13.39□□□□□ -0.27
VPS11-202ENST00000526829 DDX11L8A8MPP1 907 aa13.39□□□□□ -0.27
VPS11-202ENST00000526829 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
VPS11-202ENST00000526829 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
VPS11-202ENST00000526829 ANGEL2Q5VTE6 544 aaKnown RBP13.39□□□□□ -0.27
VPS11-202ENST00000526829 PLA2G12BQ9BX93 195 aa13.39□□□□□ -0.27
VPS11-202ENST00000526829 MYOZ2Q9NPC6 264 aa13.39□□□□□ -0.27
VPS11-202ENST00000526829 SAGE1Q9NXZ1 904 aa13.39□□□□□ -0.27
VPS11-202ENST00000526829 RAI14Q9P0K7 980 aa13.39□□□□□ -0.27
VPS11-202ENST00000526829 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
VPS11-202ENST00000526829 SLC10A3P09131 477 aa13.38□□□□□ -0.27
VPS11-202ENST00000526829 RGS19P49795 217 aa13.38□□□□□ -0.27
VPS11-202ENST00000526829 KIF23Q02241 960 aaPredicted RBP13.38□□□□□ -0.27
VPS11-202ENST00000526829 EXOC8Q8IYI6 725 aa13.38□□□□□ -0.27
VPS11-202ENST00000526829 MCOLN1Q9GZU1 580 aa13.38□□□□□ -0.27
VPS11-202ENST00000526829 IGHMBP2P38935 993 aaKnown RBP13.38□□□□□ -0.27
VPS11-202ENST00000526829 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
VPS11-202ENST00000526829 ZNF157P51786 506 aaPredicted RBP13.38□□□□□ -0.27
VPS11-202ENST00000526829 AKAP11Q9UKA4 1901 aa13.37□□□□□ -0.27
VPS11-202ENST00000526829 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
VPS11-202ENST00000526829 KDM4AO75164 1064 aa13.37□□□□□ -0.27
VPS11-202ENST00000526829 CASP7P55210 303 aa13.37□□□□□ -0.27
VPS11-202ENST00000526829 FKBP1BP68106 108 aa13.37□□□□□ -0.27
VPS11-202ENST00000526829 GCKRQ14397 625 aa13.37□□□□□ -0.27
VPS11-202ENST00000526829 DACT2Q5SW24 774 aa13.37□□□□□ -0.27
VPS11-202ENST00000526829 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
VPS11-202ENST00000526829 BCAR3O75815 825 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 TSHZ1Q6ZSZ6 1077 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 COA1Q9GZY4 146 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
VPS11-202ENST00000526829 LEMD3Q9Y2U8 911 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 CSF1RP07333 972 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 SATB1Q01826 763 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 FLIIQ13045 1269 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 FKBP5Q13451 457 aaPredicted RBP13.36□□□□□ -0.27
VPS11-202ENST00000526829 WDR63Q8IWG1 891 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 ANKRD2Q9GZV1 360 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 MYO3BQ8WXR4 1341 aa13.36□□□□□ -0.27
VPS11-202ENST00000526829 ZNF500O60304 480 aaPredicted RBP13.35□□□□□ -0.27
VPS11-202ENST00000526829 DGKZQ13574 1117 aa13.35□□□□□ -0.27
VPS11-202ENST00000526829 STRIP1Q5VSL9 837 aa13.35□□□□□ -0.27
VPS11-202ENST00000526829 TXNRD3Q86VQ6 643 aa13.35□□□□□ -0.27
VPS11-202ENST00000526829 RASAL3Q86YV0 1011 aa13.35□□□□□ -0.27
VPS11-202ENST00000526829 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
VPS11-202ENST00000526829 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
VPS11-202ENST00000526829 CSRNP1Q96S65 589 aa13.35□□□□□ -0.27
VPS11-202ENST00000526829 MPHOSPH8Q99549 860 aa13.35□□□□□ -0.27
VPS11-202ENST00000526829 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
VPS11-202ENST00000526829 KCNJ4P48050 445 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 OGFOD1Q8N543 542 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 MXD3Q9BW11 206 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 ITGA6P23229 1130 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 CCDC96Q2M329 555 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 RINLQ6ZS11 566 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 ZNF804BA4D1E1 1349 aa13.34□□□□□ -0.27
VPS11-202ENST00000526829 VAMP4O75379 141 aa13.33□□□□□ -0.28
VPS11-202ENST00000526829 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
VPS11-202ENST00000526829 IRS2Q9Y4H2 1338 aa13.32□□□□□ -0.28
VPS11-202ENST00000526829 WNT10BO00744 389 aa13.32□□□□□ -0.28
VPS11-202ENST00000526829 TRPA1O75762 1119 aa13.32□□□□□ -0.28
VPS11-202ENST00000526829 KLRK1P26718 216 aa13.32□□□□□ -0.28
VPS11-202ENST00000526829 MLLT1Q03111 559 aaPredicted RBP13.32□□□□□ -0.28
VPS11-202ENST00000526829 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
VPS11-202ENST00000526829 SGSM3Q96HU1 749 aa13.32□□□□□ -0.28
VPS11-202ENST00000526829 ZBED3Q96IU2 234 aaPredicted RBP13.32□□□□□ -0.28
VPS11-202ENST00000526829 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
VPS11-202ENST00000526829 SCAF8Q9UPN6 1271 aaKnown RBP13.32□□□□□ -0.28
VPS11-202ENST00000526829 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
VPS11-202ENST00000526829 CHRNDQ07001 517 aa13.31□□□□□ -0.28
VPS11-202ENST00000526829 SKOR2Q2VWA4 1001 aaPredicted RBP13.31□□□□□ -0.28
VPS11-202ENST00000526829 C15orf52Q6ZUT6 534 aaKnown RBP13.31□□□□□ -0.28
VPS11-202ENST00000526829 MOB2Q70IA6 237 aa13.31□□□□□ -0.28
VPS11-202ENST00000526829 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
VPS11-202ENST00000526829 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
VPS11-202ENST00000526829 GOLIM4O00461 696 aa13.31□□□□□ -0.28
VPS11-202ENST00000526829 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
VPS11-202ENST00000526829 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
VPS11-202ENST00000526829 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
VPS11-202ENST00000526829 TTLL5Q6EMB2 1281 aa13.31□□□□□ -0.28
VPS11-202ENST00000526829 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
VPS11-202ENST00000526829 UBE2Q2LH0YL09 131 aa13.3□□□□□ -0.28
VPS11-202ENST00000526829 NF2P35240 595 aa13.3□□□□□ -0.28
VPS11-202ENST00000526829 FOXO4P98177 505 aa13.3□□□□□ -0.28
VPS11-202ENST00000526829 PRAMEF18Q5VWM3 479 aa13.3□□□□□ -0.28
VPS11-202ENST00000526829 COG6Q9Y2V7 657 aa13.3□□□□□ -0.28
VPS11-202ENST00000526829 SASH1O94885 1247 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 IFIT5Q13325 482 aaKnown RBP13.29□□□□□ -0.28
VPS11-202ENST00000526829 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
VPS11-202ENST00000526829 BEND3Q5T5X7 828 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms