RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 SALL1Q9NSC2 1324 aa19.94■□□□□ 0.78
SSSCA1-202ENST00000526433 MYO1BO43795 1136 aa19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 LDHBP07195 334 aaKnown RBP19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 ARID4AP29374 1257 aaPredicted RBP19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 TEKT1Q969V4 418 aa19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 KLRG1Q96E93 195 aa19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 KIF1BPQ96EK5 621 aa19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 CDCA5Q96FF9 252 aa19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 IL1RAPL2Q9NP60 686 aa19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 HMG20BQ9P0W2 317 aa19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 SUPT16HQ9Y5B9 1047 aaKnown RBP19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 AOX1Q06278 1338 aa19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 PDS5AQ29RF7 1337 aaKnown RBP19.93■□□□□ 0.78
SSSCA1-202ENST00000526433 CLRN2A0PK11 232 aa19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 PRDX5P30044 214 aa19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 TTC39AQ5SRH9 613 aa19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 APOBEC3FQ8IUX4 373 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 ZGPATQ8N5A5 531 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 SPATA5Q8NB90 893 aa19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 MKRN1Q9UHC7 482 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 DBNLQ9UJU6 430 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 ABT1Q9ULW3 272 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 PCDHB15Q9Y5E8 787 aa19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 MAST3O60307 1309 aa19.92■□□□□ 0.78
SSSCA1-202ENST00000526433 MCAMP43121 646 aa19.91■□□□□ 0.78
SSSCA1-202ENST00000526433 PRAMEF18Q5VWM3 479 aa19.91■□□□□ 0.78
SSSCA1-202ENST00000526433 HHIPL2Q6UWX4 724 aa19.91■□□□□ 0.78
SSSCA1-202ENST00000526433 AACSQ86V21 672 aa19.91■□□□□ 0.78
SSSCA1-202ENST00000526433 TDRD3Q9H7E2 651 aaKnown RBP19.91■□□□□ 0.78
SSSCA1-202ENST00000526433 TLR7Q9NYK1 1049 aaKnown RBP19.91■□□□□ 0.78
SSSCA1-202ENST00000526433 ZNF70Q9UC06 446 aaPredicted RBP19.91■□□□□ 0.78
SSSCA1-202ENST00000526433 ABCF2Q9UG63 623 aa19.91■□□□□ 0.78
SSSCA1-202ENST00000526433 DEFB115Q30KQ5 88 aa19.9■□□□□ 0.78
SSSCA1-202ENST00000526433 SPTY2D1Q68D10 685 aaPredicted RBP19.9■□□□□ 0.78
SSSCA1-202ENST00000526433 PI16Q6UXB8 463 aa19.9■□□□□ 0.78
SSSCA1-202ENST00000526433 CLASRPQ8N2M8 674 aaKnown RBP19.9■□□□□ 0.78
SSSCA1-202ENST00000526433 ZDHHC15Q96MV8 337 aa19.9■□□□□ 0.78
SSSCA1-202ENST00000526433 VEZTQ9HBM0 779 aa19.9■□□□□ 0.78
SSSCA1-202ENST00000526433 TLL2Q9Y6L7 1015 aa19.9■□□□□ 0.78
SSSCA1-202ENST00000526433 ECM29Q5VYK3 1845 aa19.9■□□□□ 0.78
SSSCA1-202ENST00000526433 SPDYE2Q495Y8 402 aa19.89■□□□□ 0.77
SSSCA1-202ENST00000526433 APOBEC3HQ6NTF7 200 aaKnown RBP19.89■□□□□ 0.77
SSSCA1-202ENST00000526433 C2orf69Q8N8R5 385 aa19.89■□□□□ 0.77
SSSCA1-202ENST00000526433 ZNF512BQ96KM6 892 aaPredicted RBP19.89■□□□□ 0.77
SSSCA1-202ENST00000526433 BCL11AQ9H165 835 aa19.89■□□□□ 0.77
SSSCA1-202ENST00000526433 DEFB129Q9H1M3 183 aa19.89■□□□□ 0.77
SSSCA1-202ENST00000526433 DCTPP1Q9H773 170 aa19.89■□□□□ 0.77
SSSCA1-202ENST00000526433 SNRKQ9NRH2 765 aa19.89■□□□□ 0.77
SSSCA1-202ENST00000526433 RASSF10A6NK89 507 aa19.88■□□□□ 0.77
SSSCA1-202ENST00000526433 DIXDC1Q155Q3 683 aa19.88■□□□□ 0.77
SSSCA1-202ENST00000526433 TBC1D9Q6ZT07 1266 aa19.88■□□□□ 0.77
SSSCA1-202ENST00000526433 ERICH6Q7L0X2 663 aa19.88■□□□□ 0.77
SSSCA1-202ENST00000526433 SAPCD2Q86UD0 394 aa19.88■□□□□ 0.77
SSSCA1-202ENST00000526433 GBA2Q9HCG7 927 aaPredicted RBP19.88■□□□□ 0.77
SSSCA1-202ENST00000526433 CNTNAP1P78357 1384 aa19.87■□□□□ 0.77
SSSCA1-202ENST00000526433 AKAP11Q9UKA4 1901 aa19.87■□□□□ 0.77
SSSCA1-202ENST00000526433 IFIT2P09913 472 aaKnown RBP19.86■□□□□ 0.77
SSSCA1-202ENST00000526433 VEGFBP49765 207 aa19.86■□□□□ 0.77
SSSCA1-202ENST00000526433 DZIP1Q86YF9 867 aaKnown RBP19.86■□□□□ 0.77
SSSCA1-202ENST00000526433 LRRCC1Q9C099 1032 aa19.86■□□□□ 0.77
SSSCA1-202ENST00000526433 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
SSSCA1-202ENST00000526433 MYH2Q9UKX2 1941 aa19.85■□□□□ 0.77
SSSCA1-202ENST00000526433 TCP10L2B9ZVM9 353 aa19.85■□□□□ 0.77
SSSCA1-202ENST00000526433 SMARCA5O60264 1052 aaPredicted RBP19.85■□□□□ 0.77
SSSCA1-202ENST00000526433 HUNKP57058 714 aa19.85■□□□□ 0.77
SSSCA1-202ENST00000526433 RASA3Q14644 834 aa19.85■□□□□ 0.77
SSSCA1-202ENST00000526433 CYP2E1P05181 493 aaPredicted RBP19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 NF2P35240 595 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 ZAP70P43403 619 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 MECOMQ03112 1051 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 AAMPQ13685 434 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 TNFAIP1Q13829 316 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 PAXIP1Q6ZW49 1069 aaPredicted RBP19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 SLF2Q8IX21 1173 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 JMYQ8N9B5 988 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 EXOC6Q8TAG9 804 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 FAM163AQ96GL9 167 aaPredicted RBP19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 RAI14Q9P0K7 980 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 LRP2BPQ9P2M1 347 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 PPP2R3BQ9Y5P8 575 aa19.84■□□□□ 0.77
SSSCA1-202ENST00000526433 TNNI2P48788 182 aa19.83■□□□□ 0.77
SSSCA1-202ENST00000526433 CACNB3P54284 484 aa19.83■□□□□ 0.77
SSSCA1-202ENST00000526433 CDC42EP5Q6NZY7 148 aa19.83■□□□□ 0.77
SSSCA1-202ENST00000526433 HHIPL1Q96JK4 782 aa19.83■□□□□ 0.77
SSSCA1-202ENST00000526433 TMOD2Q9NZR1 351 aa19.83■□□□□ 0.77
SSSCA1-202ENST00000526433 LDHCP07864 332 aa19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 FKBP1BP68106 108 aa19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 TTLL12Q14166 644 aaPredicted RBP19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 SUPT20HL1Q3ZLR7 823 aa19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 NBPF12Q5TAG4 269 aaPredicted RBP19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 CYP4F22Q6NT55 531 aa19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 MOB2Q70IA6 237 aa19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 ZNF384Q8TF68 577 aa19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 NSUN4Q96CB9 384 aaKnown RBP19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 CAPNS2Q96L46 248 aa19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 USP40Q9NVE5 1235 aa19.82■□□□□ 0.76
SSSCA1-202ENST00000526433 GAKO14976 1311 aa19.81■□□□□ 0.76
SSSCA1-202ENST00000526433 WDR33Q9C0J8 1336 aaKnown RBP19.81■□□□□ 0.76
SSSCA1-202ENST00000526433 UBE2Q2LH0YL09 131 aa19.81■□□□□ 0.76
SSSCA1-202ENST00000526433 ECE1P42892 770 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms