RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 PHKA1P46020 1223 aa16.68■□□□□ 0.26
USH1C-203ENST00000526181 TTLL12Q14166 644 aaPredicted RBP16.68■□□□□ 0.26
USH1C-203ENST00000526181 IFFO2Q5TF58 517 aa16.68■□□□□ 0.26
USH1C-203ENST00000526181 RASAL3Q86YV0 1011 aa16.68■□□□□ 0.26
USH1C-203ENST00000526181 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
USH1C-203ENST00000526181 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
USH1C-203ENST00000526181 NF2P35240 595 aa16.67■□□□□ 0.26
USH1C-203ENST00000526181 TIMM10P62072 90 aa16.67■□□□□ 0.26
USH1C-203ENST00000526181 KIF23Q02241 960 aaPredicted RBP16.67■□□□□ 0.26
USH1C-203ENST00000526181 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
USH1C-203ENST00000526181 CCDC102AQ96A19 550 aa16.67■□□□□ 0.26
USH1C-203ENST00000526181 BEGAINQ9BUH8 593 aa16.67■□□□□ 0.26
USH1C-203ENST00000526181 A0A1B0GUL7 405 aa16.66■□□□□ 0.26
USH1C-203ENST00000526181 ZBTB7BO15156 539 aaPredicted RBP16.66■□□□□ 0.26
USH1C-203ENST00000526181 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
USH1C-203ENST00000526181 TNS4Q8IZW8 715 aa16.66■□□□□ 0.26
USH1C-203ENST00000526181 POLA2Q14181 598 aa16.65■□□□□ 0.26
USH1C-203ENST00000526181 RASA3Q14644 834 aa16.65■□□□□ 0.26
USH1C-203ENST00000526181 NBPF12Q5TAG4 269 aaPredicted RBP16.65■□□□□ 0.26
USH1C-203ENST00000526181 CDAN1Q8IWY9 1227 aa16.65■□□□□ 0.26
USH1C-203ENST00000526181 TEKT1Q969V4 418 aa16.65■□□□□ 0.26
USH1C-203ENST00000526181 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
USH1C-203ENST00000526181 ANGEL1Q9UNK9 670 aaKnown RBP16.65■□□□□ 0.26
USH1C-203ENST00000526181 PPP2R3BQ9Y5P8 575 aa16.65■□□□□ 0.26
USH1C-203ENST00000526181 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
USH1C-203ENST00000526181 PRDX5P30044 214 aa16.64■□□□□ 0.25
USH1C-203ENST00000526181 CACNB3P54284 484 aa16.64■□□□□ 0.25
USH1C-203ENST00000526181 HDLBPQ00341 1268 aaKnown RBP16.64■□□□□ 0.25
USH1C-203ENST00000526181 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.25
USH1C-203ENST00000526181 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
USH1C-203ENST00000526181 GNL3LQ9NVN8 582 aaKnown RBP16.64■□□□□ 0.25
USH1C-203ENST00000526181 ATP8B2P98198 1209 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
USH1C-203ENST00000526181 RASGRF1Q13972 1273 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 ARMC9Q7Z3E5 817 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 SSH3Q8TE77 659 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 ZDHHC15Q96MV8 337 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
USH1C-203ENST00000526181 AKAP2Q9Y2D5 859 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 SUGT1Q9Y2Z0 365 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 MAST3O60307 1309 aa16.63■□□□□ 0.25
USH1C-203ENST00000526181 MYH13Q9UKX3 1938 aa16.62■□□□□ 0.25
USH1C-203ENST00000526181 SEMA3EO15041 775 aa16.62■□□□□ 0.25
USH1C-203ENST00000526181 G3BP1Q13283 466 aaKnown RBP eCLIP16.62■□□□□ 0.25
USH1C-203ENST00000526181 DIXDC1Q155Q3 683 aa16.62■□□□□ 0.25
USH1C-203ENST00000526181 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
USH1C-203ENST00000526181 APOBEC3HQ6NTF7 200 aaKnown RBP16.62■□□□□ 0.25
USH1C-203ENST00000526181 TEPSINQ96N21 525 aa16.62■□□□□ 0.25
USH1C-203ENST00000526181 CSRNP1Q96S65 589 aa16.62■□□□□ 0.25
USH1C-203ENST00000526181 TMEM39BQ9GZU3 492 aa16.62■□□□□ 0.25
USH1C-203ENST00000526181 DENND2AQ9ULE3 1009 aa16.62■□□□□ 0.25
USH1C-203ENST00000526181 TNFAIP1Q13829 316 aa16.61■□□□□ 0.25
USH1C-203ENST00000526181 SUPT20HL1Q3ZLR7 823 aa16.61■□□□□ 0.25
USH1C-203ENST00000526181 HHIPL2Q6UWX4 724 aa16.61■□□□□ 0.25
USH1C-203ENST00000526181 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
USH1C-203ENST00000526181 MRIQ9BWK5 157 aa16.61■□□□□ 0.25
USH1C-203ENST00000526181 RCAN3Q9UKA8 241 aa16.61■□□□□ 0.25
USH1C-203ENST00000526181 DAGLAQ9Y4D2 1042 aa16.61■□□□□ 0.25
USH1C-203ENST00000526181 SALL1Q9NSC2 1324 aa16.61■□□□□ 0.25
USH1C-203ENST00000526181 CA12O43570 354 aa16.6■□□□□ 0.25
USH1C-203ENST00000526181 SURF6O75683 361 aaKnown RBP16.6■□□□□ 0.25
USH1C-203ENST00000526181 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
USH1C-203ENST00000526181 MVPQ14764 893 aaKnown RBP16.6■□□□□ 0.25
USH1C-203ENST00000526181 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
USH1C-203ENST00000526181 CEP85Q6P2H3 762 aa16.6■□□□□ 0.25
USH1C-203ENST00000526181 PI16Q6UXB8 463 aa16.6■□□□□ 0.25
USH1C-203ENST00000526181 PPP1R12BO60237 982 aaPredicted RBP16.59■□□□□ 0.25
USH1C-203ENST00000526181 USP2O75604 605 aaPredicted RBP16.59■□□□□ 0.25
USH1C-203ENST00000526181 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
USH1C-203ENST00000526181 RNF186Q9NXI6 227 aa16.59■□□□□ 0.25
USH1C-203ENST00000526181 COG6Q9Y2V7 657 aa16.59■□□□□ 0.25
USH1C-203ENST00000526181 ZBTB22O15209 634 aa16.58■□□□□ 0.24
USH1C-203ENST00000526181 TRPA1O75762 1119 aa16.58■□□□□ 0.24
USH1C-203ENST00000526181 TNNI2P48788 182 aa16.58■□□□□ 0.24
USH1C-203ENST00000526181 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
USH1C-203ENST00000526181 HMG20BQ9P0W2 317 aa16.58■□□□□ 0.24
USH1C-203ENST00000526181 ABCF2Q9UG63 623 aa16.58■□□□□ 0.24
USH1C-203ENST00000526181 PDS5AQ29RF7 1337 aaKnown RBP16.58■□□□□ 0.24
USH1C-203ENST00000526181 CAPN15O75808 1086 aa16.57■□□□□ 0.24
USH1C-203ENST00000526181 TNNI3KQ59H18 835 aa16.57■□□□□ 0.24
USH1C-203ENST00000526181 GORABQ5T7V8 394 aa16.57■□□□□ 0.24
USH1C-203ENST00000526181 SPRYD7Q5W111 196 aa16.57■□□□□ 0.24
USH1C-203ENST00000526181 CDC42EP5Q6NZY7 148 aa16.57■□□□□ 0.24
USH1C-203ENST00000526181 SAGE1Q9NXZ1 904 aa16.57■□□□□ 0.24
USH1C-203ENST00000526181 FPGT-TNNI3KV9GXZ4 949 aa16.57■□□□□ 0.24
USH1C-203ENST00000526181 MS4A1P11836 297 aa16.56■□□□□ 0.24
USH1C-203ENST00000526181 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
USH1C-203ENST00000526181 IREB2P48200 963 aaKnown RBP16.56■□□□□ 0.24
USH1C-203ENST00000526181 C20orf194Q5TEA3 1177 aa16.56■□□□□ 0.24
USH1C-203ENST00000526181 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
USH1C-203ENST00000526181 SPATA5Q8NB90 893 aa16.56■□□□□ 0.24
USH1C-203ENST00000526181 DBNDD2Q9BQY9 259 aa16.56■□□□□ 0.24
USH1C-203ENST00000526181 NOP58Q9Y2X3 529 aaKnown RBP16.56■□□□□ 0.24
USH1C-203ENST00000526181 OTOFQ9HC10 1997 aa16.56■□□□□ 0.24
USH1C-203ENST00000526181 MCAMP43121 646 aa16.55■□□□□ 0.24
USH1C-203ENST00000526181 NFIAQ12857 509 aa16.55■□□□□ 0.24
USH1C-203ENST00000526181 DZIP1Q86YF9 867 aaKnown RBP16.55■□□□□ 0.24
USH1C-203ENST00000526181 ZGPATQ8N5A5 531 aaKnown RBP16.55■□□□□ 0.24
USH1C-203ENST00000526181 ZNF384Q8TF68 577 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms