RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 MRIQ9BWK5 157 aa15.31■□□□□ 0.04
COLCA1-202ENST00000526150 PUS3Q9BZE2 481 aaKnown RBP15.31■□□□□ 0.04
COLCA1-202ENST00000526150 R3HDMLQ9H3Y0 253 aa15.31■□□□□ 0.04
COLCA1-202ENST00000526150 PCDH10Q9P2E7 1040 aa15.31■□□□□ 0.04
COLCA1-202ENST00000526150 SUGT1Q9Y2Z0 365 aa15.31■□□□□ 0.04
COLCA1-202ENST00000526150 CSADQ9Y600 493 aa15.31■□□□□ 0.04
COLCA1-202ENST00000526150 MAST3O60307 1309 aa15.31■□□□□ 0.04
COLCA1-202ENST00000526150 SSC5DA1L4H1 1573 aa15.3■□□□□ 0.04
COLCA1-202ENST00000526150 TESPA1A2RU30 521 aaPredicted RBP15.3■□□□□ 0.04
COLCA1-202ENST00000526150 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
COLCA1-202ENST00000526150 PDE8BO95263 885 aa15.3■□□□□ 0.04
COLCA1-202ENST00000526150 LAMB1P07942 1786 aa15.3■□□□□ 0.04
COLCA1-202ENST00000526150 OTOP1Q7RTM1 612 aa15.3■□□□□ 0.04
COLCA1-202ENST00000526150 BICC1Q9H694 974 aaKnown RBP15.3■□□□□ 0.04
COLCA1-202ENST00000526150 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
COLCA1-202ENST00000526150 IFIT1P09914 478 aaKnown RBP15.29■□□□□ 0.04
COLCA1-202ENST00000526150 GTF2A2P52657 109 aa15.29■□□□□ 0.04
COLCA1-202ENST00000526150 MAP3K9P80192 1104 aa15.29■□□□□ 0.04
COLCA1-202ENST00000526150 SP3Q02447 781 aa15.29■□□□□ 0.04
COLCA1-202ENST00000526150 CHAF1AQ13111 956 aaPredicted RBP15.29■□□□□ 0.04
COLCA1-202ENST00000526150 OPTNQ96CV9 577 aa15.29■□□□□ 0.04
COLCA1-202ENST00000526150 KAZALD1Q96I82 304 aa15.29■□□□□ 0.04
COLCA1-202ENST00000526150 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
COLCA1-202ENST00000526150 EFCC1Q9HA90 598 aa15.29■□□□□ 0.04
COLCA1-202ENST00000526150 KIF16BQ96L93 1317 aa15.28■□□□□ 0.04
COLCA1-202ENST00000526150 E9PSI1 815 aa15.28■□□□□ 0.04
COLCA1-202ENST00000526150 CRHR2Q13324 411 aa15.28■□□□□ 0.04
COLCA1-202ENST00000526150 FKBP1CQ5VVH2 108 aa15.28■□□□□ 0.04
COLCA1-202ENST00000526150 MRPL50Q8N5N7 158 aaKnown RBP15.28■□□□□ 0.04
COLCA1-202ENST00000526150 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
COLCA1-202ENST00000526150 HDAC5Q9UQL6 1122 aa15.28■□□□□ 0.04
COLCA1-202ENST00000526150 ARAP2Q8WZ64 1704 aa15.28■□□□□ 0.04
COLCA1-202ENST00000526150 PUM3Q15397 648 aaKnown RBP15.27■□□□□ 0.04
COLCA1-202ENST00000526150 FAM83AQ86UY5 434 aa15.27■□□□□ 0.04
COLCA1-202ENST00000526150 GCC1Q96CN9 775 aa15.27■□□□□ 0.04
COLCA1-202ENST00000526150 TEPSINQ96N21 525 aa15.27■□□□□ 0.04
COLCA1-202ENST00000526150 IQSEC3Q9UPP2 1182 aaPredicted RBP15.27■□□□□ 0.04
COLCA1-202ENST00000526150 PTPN22Q9Y2R2 807 aa15.27■□□□□ 0.04
COLCA1-202ENST00000526150 TNRC18O15417 2968 aaPredicted RBP15.27■□□□□ 0.03
COLCA1-202ENST00000526150 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 CCL15-CCL14A0A0B4J2E2 113 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 GJA5P36382 358 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 TAF1CQ15572 869 aaPredicted RBP15.26■□□□□ 0.03
COLCA1-202ENST00000526150 CCL15Q16663 113 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 LRRC24Q50LG9 513 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 DCAF15Q66K64 600 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.26■□□□□ 0.03
COLCA1-202ENST00000526150 WDR66Q8TBY9 1149 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 CD99L2Q8TCZ2 262 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 ZDHHC15Q96MV8 337 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
COLCA1-202ENST00000526150 AOX1Q06278 1338 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 CETPP11597 493 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 SLC5A1P13866 664 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 HHIPL2Q6UWX4 724 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 NBPF11Q86T75 865 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 ANKRD44Q8N8A2 993 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.25■□□□□ 0.03
COLCA1-202ENST00000526150 MS4A4AQ96JQ5 239 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 PTPN18Q99952 460 aa15.25■□□□□ 0.03
COLCA1-202ENST00000526150 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
COLCA1-202ENST00000526150 BCAMP50895 628 aa15.24■□□□□ 0.03
COLCA1-202ENST00000526150 VGLL4Q14135 290 aa15.24■□□□□ 0.03
COLCA1-202ENST00000526150 KIF22Q14807 665 aa15.24■□□□□ 0.03
COLCA1-202ENST00000526150 VGLL2Q8N8G2 317 aa15.24■□□□□ 0.03
COLCA1-202ENST00000526150 LPIN2Q92539 896 aa15.24■□□□□ 0.03
COLCA1-202ENST00000526150 TMEM106CQ9BVX2 250 aa15.24■□□□□ 0.03
COLCA1-202ENST00000526150 USP44Q9H0E7 712 aa15.24■□□□□ 0.03
COLCA1-202ENST00000526150 FBXO3Q9UK99 471 aa15.24■□□□□ 0.03
COLCA1-202ENST00000526150 SPDYE5A6NIY4 337 aa15.23■□□□□ 0.03
COLCA1-202ENST00000526150 EYA2O00167 538 aa15.23■□□□□ 0.03
COLCA1-202ENST00000526150 BRI3BPQ8WY22 251 aa15.23■□□□□ 0.03
COLCA1-202ENST00000526150 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
COLCA1-202ENST00000526150 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
COLCA1-202ENST00000526150 GNL3LQ9NVN8 582 aaKnown RBP15.23■□□□□ 0.03
COLCA1-202ENST00000526150 OTOFQ9HC10 1997 aa15.22■□□□□ 0.03
COLCA1-202ENST00000526150 FGFR2P21802 821 aa15.22■□□□□ 0.03
COLCA1-202ENST00000526150 SNAPC2Q13487 334 aa15.22■□□□□ 0.03
COLCA1-202ENST00000526150 ARMC5Q96C12 935 aa15.22■□□□□ 0.03
COLCA1-202ENST00000526150 WRNIP1Q96S55 665 aa15.22■□□□□ 0.03
COLCA1-202ENST00000526150 ZNF341Q9BYN7 854 aa15.22■□□□□ 0.03
COLCA1-202ENST00000526150 RPAP1Q9BWH6 1393 aaPredicted RBP15.22■□□□□ 0.03
COLCA1-202ENST00000526150 GNRH1P01148 92 aa15.21■□□□□ 0.03
COLCA1-202ENST00000526150 CT47B1P0C2W7 299 aaPredicted RBP15.21■□□□□ 0.03
COLCA1-202ENST00000526150 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
COLCA1-202ENST00000526150 KLHDC4Q8TBB5 520 aa15.21■□□□□ 0.03
COLCA1-202ENST00000526150 CEP126Q9P2H0 1117 aa15.21■□□□□ 0.03
COLCA1-202ENST00000526150 KIAA0100Q14667 2235 aaKnown RBP15.2■□□□□ 0.02
COLCA1-202ENST00000526150 TLR2O60603 784 aa15.2■□□□□ 0.02
COLCA1-202ENST00000526150 UBTFL1P0CB47 393 aaPredicted RBP15.2■□□□□ 0.02
COLCA1-202ENST00000526150 CACNB3P54284 484 aa15.2■□□□□ 0.02
COLCA1-202ENST00000526150 PRMT2P55345 433 aa15.2■□□□□ 0.02
COLCA1-202ENST00000526150 PPATQ06203 517 aa15.2■□□□□ 0.02
COLCA1-202ENST00000526150 SLFN5Q08AF3 891 aa15.2■□□□□ 0.02
COLCA1-202ENST00000526150 PPIL2Q13356 520 aa15.2■□□□□ 0.02
COLCA1-202ENST00000526150 GRIK5Q16478 980 aa15.2■□□□□ 0.02
COLCA1-202ENST00000526150 SLC9C1Q4G0N8 1177 aa15.2■□□□□ 0.02
COLCA1-202ENST00000526150 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms