RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
CSDE1-211ENST00000525970 SNX29Q8TEQ0 813 aa7.42□□□□□ -1.22
CSDE1-211ENST00000525970 HHIPQ96QV1 700 aa7.42□□□□□ -1.22
CSDE1-211ENST00000525970 OSMRQ99650 979 aa7.42□□□□□ -1.22
CSDE1-211ENST00000525970 ADAMTS4O75173 837 aa7.41□□□□□ -1.22
CSDE1-211ENST00000525970 NUTM2GQ5VZR2 741 aa7.41□□□□□ -1.22
CSDE1-211ENST00000525970 VN1R5Q7Z5H4 357 aa7.41□□□□□ -1.22
CSDE1-211ENST00000525970 TMC1Q8TDI8 760 aa7.41□□□□□ -1.22
CSDE1-211ENST00000525970 MRRFQ96E11 262 aaKnown RBP7.41□□□□□ -1.22
CSDE1-211ENST00000525970 ZKSCAN3Q9BRR0 538 aa7.41□□□□□ -1.22
CSDE1-211ENST00000525970 TMPRSS13Q9BYE2 586 aa7.41□□□□□ -1.22
CSDE1-211ENST00000525970 BHLHE41Q9C0J9 482 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-211ENST00000525970 CYP4F12Q9HCS2 524 aa7.41□□□□□ -1.22
CSDE1-211ENST00000525970 PIM2Q9P1W9 311 aa7.41□□□□□ -1.22
CSDE1-211ENST00000525970 ANKRD33BA6NCL7 494 aa7.4□□□□□ -1.22
CSDE1-211ENST00000525970 WDR64B1ANS9 1081 aa7.4□□□□□ -1.22
CSDE1-211ENST00000525970 SOX1O00570 391 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-211ENST00000525970 PHACTR2O75167 634 aa7.4□□□□□ -1.22
CSDE1-211ENST00000525970 TRPA1O75762 1119 aa7.4□□□□□ -1.22
CSDE1-211ENST00000525970 BCL2L13Q9BXK5 485 aa7.4□□□□□ -1.22
CSDE1-211ENST00000525970 EREGO14944 169 aa7.39□□□□□ -1.23
CSDE1-211ENST00000525970 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
CSDE1-211ENST00000525970 TIAF1O95411 115 aa7.39□□□□□ -1.23
CSDE1-211ENST00000525970 HGSNATQ68CP4 663 aa7.39□□□□□ -1.23
CSDE1-211ENST00000525970 FBXO33Q7Z6M2 555 aa7.39□□□□□ -1.23
CSDE1-211ENST00000525970 C12orf50Q8NA57 414 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-211ENST00000525970 ATG3Q9NT62 314 aa7.39□□□□□ -1.23
CSDE1-211ENST00000525970 LOC100289279A0A1B0GTE1 492 aa7.38□□□□□ -1.23
CSDE1-211ENST00000525970 SGO2Q562F6 1265 aa7.38□□□□□ -1.23
CSDE1-211ENST00000525970 GJD3Q8N144 294 aa7.38□□□□□ -1.23
CSDE1-211ENST00000525970 MFSD14AQ96MC6 490 aa7.38□□□□□ -1.23
CSDE1-211ENST00000525970 USP26Q9BXU7 913 aa7.38□□□□□ -1.23
CSDE1-211ENST00000525970 VAMP1P23763 118 aa7.37□□□□□ -1.23
CSDE1-211ENST00000525970 RXRBP28702 533 aa7.37□□□□□ -1.23
CSDE1-211ENST00000525970 PDE3BQ13370 1112 aa7.37□□□□□ -1.23
CSDE1-211ENST00000525970 EXOSC6Q5RKV6 272 aaKnown RBP7.37□□□□□ -1.23
CSDE1-211ENST00000525970 GIPC2Q8TF65 315 aa7.37□□□□□ -1.23
CSDE1-211ENST00000525970 KRTAP9-9Q9BYP9 154 aa7.37□□□□□ -1.23
CSDE1-211ENST00000525970 KRTAP9-4Q9BYQ2 154 aa7.37□□□□□ -1.23
CSDE1-211ENST00000525970 LEMD3Q9Y2U8 911 aa7.37□□□□□ -1.23
CSDE1-211ENST00000525970 RNF114Q9Y508 228 aa7.37□□□□□ -1.23
CSDE1-211ENST00000525970 ESRRAP11474 423 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-211ENST00000525970 FOSL1P15407 271 aa7.36□□□□□ -1.23
CSDE1-211ENST00000525970 YBX3P16989 372 aaKnown RBP eCLIP7.36□□□□□ -1.232e-24■■□□□ 11.8
CSDE1-211ENST00000525970 PAOXQ6QHF9 649 aa7.36□□□□□ -1.23
CSDE1-211ENST00000525970 ASB16Q96NS5 453 aa7.36□□□□□ -1.23
CSDE1-211ENST00000525970 CITED4Q96RK1 184 aa7.36□□□□□ -1.23
CSDE1-211ENST00000525970 METTL22Q9BUU2 404 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-211ENST00000525970 YIPF2Q9BWQ6 316 aa7.36□□□□□ -1.23
CSDE1-211ENST00000525970 OSBPL1AQ9BXW6 950 aa7.36□□□□□ -1.23
CSDE1-211ENST00000525970 ADGRE2Q9UHX3 823 aa7.36□□□□□ -1.23
CSDE1-211ENST00000525970 FOXD3Q9UJU5 478 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-211ENST00000525970 FAM95CA0A1B0GW59 222 aa7.35□□□□□ -1.23
CSDE1-211ENST00000525970 F13BP05160 661 aa7.35□□□□□ -1.23
CSDE1-211ENST00000525970 MAPK1P28482 360 aa7.35□□□□□ -1.23
CSDE1-211ENST00000525970 MSMPQ1L6U9 139 aa7.35□□□□□ -1.23
CSDE1-211ENST00000525970 ASAP3Q8TDY4 903 aa7.35□□□□□ -1.23
CSDE1-211ENST00000525970 DCTN4Q9UJW0 460 aa7.35□□□□□ -1.23
CSDE1-211ENST00000525970 PRNPP04156 253 aa7.34□□□□□ -1.23
CSDE1-211ENST00000525970 NEFLP07196 543 aa7.34□□□□□ -1.23
CSDE1-211ENST00000525970 HOXA10P31260 410 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-211ENST00000525970 USP11P51784 963 aa7.34□□□□□ -1.23
CSDE1-211ENST00000525970 COL19A1Q14993 1142 aa7.34□□□□□ -1.23
CSDE1-211ENST00000525970 PEAR1Q5VY43 1037 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-211ENST00000525970 ANGEL1Q9UNK9 670 aaKnown RBP7.34□□□□□ -1.23
CSDE1-211ENST00000525970 SHROOM4Q9ULL8 1493 aa7.33□□□□□ -1.24
CSDE1-211ENST00000525970 DLGAP3O95886 979 aa7.33□□□□□ -1.24
CSDE1-211ENST00000525970 GSTM4Q03013 218 aa7.33□□□□□ -1.24
CSDE1-211ENST00000525970 NFKBIBQ15653 356 aa7.33□□□□□ -1.24
CSDE1-211ENST00000525970 HP1BP3Q5SSJ5 553 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-211ENST00000525970 FBXL6Q8N531 539 aa7.33□□□□□ -1.24
CSDE1-211ENST00000525970 C2CD4AQ8NCU7 369 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-211ENST00000525970 EZH1Q92800 747 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-211ENST00000525970 RBCK1Q9BYM8 510 aa7.33□□□□□ -1.24
CSDE1-211ENST00000525970 NIF3L1Q9GZT8 377 aa7.33□□□□□ -1.24
CSDE1-211ENST00000525970 ZFYVE28Q9HCC9 887 aa7.33□□□□□ -1.24
CSDE1-211ENST00000525970 TAGLNQ01995 201 aaKnown RBP7.32□□□□□ -1.24
CSDE1-211ENST00000525970 SOX4Q06945 474 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-211ENST00000525970 VSIG10LQ86VR7 867 aa7.32□□□□□ -1.24
CSDE1-211ENST00000525970 FBXL18Q96ME1 805 aa7.32□□□□□ -1.24
CSDE1-211ENST00000525970 FAM129BQ96TA1 746 aa7.32□□□□□ -1.24
CSDE1-211ENST00000525970 NRSN2Q9GZP1 204 aa7.32□□□□□ -1.24
CSDE1-211ENST00000525970 ZFYVE1Q9HBF4 777 aa7.32□□□□□ -1.24
CSDE1-211ENST00000525970 DRD2P14416 443 aa7.31□□□□□ -1.24
CSDE1-211ENST00000525970 TCF3P15923 654 aa7.31□□□□□ -1.24
CSDE1-211ENST00000525970 ZNF326Q5BKZ1 582 aaKnown RBP7.31□□□□□ -1.24
CSDE1-211ENST00000525970 CDPF1Q6NVV7 123 aa7.31□□□□□ -1.24
CSDE1-211ENST00000525970 TMC7Q7Z402 723 aa7.31□□□□□ -1.24
CSDE1-211ENST00000525970 FBLIM1Q8WUP2 373 aa7.31□□□□□ -1.24
CSDE1-211ENST00000525970 DMRTB1Q96MA1 342 aa7.31□□□□□ -1.24
CSDE1-211ENST00000525970 CLEC4MQ9H2X3 399 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-211ENST00000525970 LATS2Q9NRM7 1088 aa7.31□□□□□ -1.24
CSDE1-211ENST00000525970 GPR182O15218 404 aa7.3□□□□□ -1.24
CSDE1-211ENST00000525970 CYP11A1P05108 521 aa7.3□□□□□ -1.24
CSDE1-211ENST00000525970 POLR3DP05423 398 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-211ENST00000525970 ADH5P11766 374 aa7.3□□□□□ -1.24
CSDE1-211ENST00000525970 ORC1Q13415 861 aa7.3□□□□□ -1.24
CSDE1-211ENST00000525970 ZAR1Q86SH2 424 aa7.3□□□□□ -1.24
CSDE1-211ENST00000525970 CCNJLQ8IV13 435 aa7.3□□□□□ -1.24
CSDE1-211ENST00000525970 ABI1Q8IZP0 508 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 630.1 ms