RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TNFAIP1Q13829 316 aa21.65■■□□□ 1.06
NR1H3-228ENST00000525441 TTLL12Q14166 644 aaPredicted RBP21.65■■□□□ 1.06
NR1H3-228ENST00000525441 MVPQ14764 893 aaKnown RBP21.65■■□□□ 1.06
NR1H3-228ENST00000525441 TEKT1Q969V4 418 aa21.65■■□□□ 1.06
NR1H3-228ENST00000525441 BEGAINQ9BUH8 593 aa21.65■■□□□ 1.06
NR1H3-228ENST00000525441 MRIQ9BWK5 157 aa21.65■■□□□ 1.06
NR1H3-228ENST00000525441 PAPPA2Q9BXP8 1791 aa21.64■■□□□ 1.06
NR1H3-228ENST00000525441 AOC2O75106 756 aa21.64■■□□□ 1.05
NR1H3-228ENST00000525441 ZNF157P51786 506 aaPredicted RBP21.64■■□□□ 1.05
NR1H3-228ENST00000525441 GRIK5Q16478 980 aa21.64■■□□□ 1.05
NR1H3-228ENST00000525441 CCDC102BQ68D86 513 aa21.64■■□□□ 1.05
NR1H3-228ENST00000525441 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.64■■□□□ 1.05
NR1H3-228ENST00000525441 XAGE2Q96GT9 111 aa21.64■■□□□ 1.05
NR1H3-228ENST00000525441 NEUROD6Q96NK8 337 aa21.64■■□□□ 1.05
NR1H3-228ENST00000525441 CHMP4BQ9H444 224 aaKnown RBP21.64■■□□□ 1.05
NR1H3-228ENST00000525441 THSD7BQ9C0I4 1608 aa21.63■■□□□ 1.05
NR1H3-228ENST00000525441 SPDYE2Q495Y8 402 aa21.63■■□□□ 1.05
NR1H3-228ENST00000525441 ZNF70Q9UC06 446 aaPredicted RBP21.63■■□□□ 1.05
NR1H3-228ENST00000525441 DDX19BQ9UMR2 479 aa21.63■■□□□ 1.05
NR1H3-228ENST00000525441 ECM29Q5VYK3 1845 aa21.62■■□□□ 1.05
NR1H3-228ENST00000525441 SURF6O75683 361 aaKnown RBP21.62■■□□□ 1.05
NR1H3-228ENST00000525441 CTCFP49711 727 aaPredicted RBP21.62■■□□□ 1.05
NR1H3-228ENST00000525441 GORABQ5T7V8 394 aa21.62■■□□□ 1.05
NR1H3-228ENST00000525441 ARMC9Q7Z3E5 817 aa21.62■■□□□ 1.05
NR1H3-228ENST00000525441 ZGPATQ8N5A5 531 aaKnown RBP21.62■■□□□ 1.05
NR1H3-228ENST00000525441 TDRD3Q9H7E2 651 aaKnown RBP21.62■■□□□ 1.05
NR1H3-228ENST00000525441 PCNTO95613 3336 aa21.62■■□□□ 1.05
NR1H3-228ENST00000525441 SALL1Q9NSC2 1324 aa21.61■■□□□ 1.05
NR1H3-228ENST00000525441 MYH13Q9UKX3 1938 aa21.61■■□□□ 1.05
NR1H3-228ENST00000525441 FOXN1O15353 648 aa21.61■■□□□ 1.05
NR1H3-228ENST00000525441 SUPT20HL1Q3ZLR7 823 aa21.61■■□□□ 1.05
NR1H3-228ENST00000525441 CEP85Q6P2H3 762 aa21.61■■□□□ 1.05
NR1H3-228ENST00000525441 HHIPL2Q6UWX4 724 aa21.61■■□□□ 1.05
NR1H3-228ENST00000525441 ZDHHC15Q96MV8 337 aa21.61■■□□□ 1.05
NR1H3-228ENST00000525441 AOX1Q06278 1338 aa21.6■■□□□ 1.05
NR1H3-228ENST00000525441 PDS5AQ29RF7 1337 aaKnown RBP21.6■■□□□ 1.05
NR1H3-228ENST00000525441 LDHBP07195 334 aaKnown RBP21.6■■□□□ 1.05
NR1H3-228ENST00000525441 TNNI2P48788 182 aa21.6■■□□□ 1.05
NR1H3-228ENST00000525441 RASA3Q14644 834 aa21.6■■□□□ 1.05
NR1H3-228ENST00000525441 GPR108Q9NPR9 543 aa21.6■■□□□ 1.05
NR1H3-228ENST00000525441 TMOD2Q9NZR1 351 aa21.6■■□□□ 1.05
NR1H3-228ENST00000525441 COG6Q9Y2V7 657 aa21.6■■□□□ 1.05
NR1H3-228ENST00000525441 NOP58Q9Y2X3 529 aaKnown RBP21.6■■□□□ 1.05
NR1H3-228ENST00000525441 UBE2Q2LH0YL09 131 aa21.59■■□□□ 1.05
NR1H3-228ENST00000525441 SLC10A3P09131 477 aa21.59■■□□□ 1.05
NR1H3-228ENST00000525441 RASGRF1Q13972 1273 aa21.59■■□□□ 1.05
NR1H3-228ENST00000525441 MOB2Q70IA6 237 aa21.59■■□□□ 1.05
NR1H3-228ENST00000525441 FAM155AB1AL88 458 aaPredicted RBP21.58■■□□□ 1.05
NR1H3-228ENST00000525441 PPP1R12BO60237 982 aaPredicted RBP21.58■■□□□ 1.05
NR1H3-228ENST00000525441 PDE3AQ14432 1141 aa21.58■■□□□ 1.05
NR1H3-228ENST00000525441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.58■■□□□ 1.05
NR1H3-228ENST00000525441 CA12O43570 354 aa21.57■■□□□ 1.04
NR1H3-228ENST00000525441 PRDX5P30044 214 aa21.57■■□□□ 1.04
NR1H3-228ENST00000525441 PRKG1Q13976 671 aa21.57■■□□□ 1.04
NR1H3-228ENST00000525441 SPTY2D1Q68D10 685 aaPredicted RBP21.57■■□□□ 1.04
NR1H3-228ENST00000525441 ANGEL1Q9UNK9 670 aaKnown RBP21.57■■□□□ 1.04
NR1H3-228ENST00000525441 TCP10L2B9ZVM9 353 aa21.56■■□□□ 1.04
NR1H3-228ENST00000525441 UQCRFS1P1P0C7P4 283 aa21.56■■□□□ 1.04
NR1H3-228ENST00000525441 TNNI3KQ59H18 835 aa21.56■■□□□ 1.04
NR1H3-228ENST00000525441 APOBEC3HQ6NTF7 200 aaKnown RBP21.56■■□□□ 1.04
NR1H3-228ENST00000525441 RASAL3Q86YV0 1011 aa21.56■■□□□ 1.04
NR1H3-228ENST00000525441 RPAP2Q8IXW5 612 aaPredicted RBP21.56■■□□□ 1.04
NR1H3-228ENST00000525441 ZBTB40Q9NUA8 1239 aa21.56■■□□□ 1.04
NR1H3-228ENST00000525441 FPGT-TNNI3KV9GXZ4 949 aa21.56■■□□□ 1.04
NR1H3-228ENST00000525441 HMMRO75330 724 aa21.55■■□□□ 1.04
NR1H3-228ENST00000525441 KIF23Q02241 960 aaPredicted RBP21.55■■□□□ 1.04
NR1H3-228ENST00000525441 HSP90AB4PQ58FF6 505 aa21.55■■□□□ 1.04
NR1H3-228ENST00000525441 NBPF12Q5TAG4 269 aaPredicted RBP21.55■■□□□ 1.04
NR1H3-228ENST00000525441 FKBP1CQ5VVH2 108 aa21.55■■□□□ 1.04
NR1H3-228ENST00000525441 ERC1Q8IUD2 1116 aa21.55■■□□□ 1.04
NR1H3-228ENST00000525441 SLF2Q8IX21 1173 aa21.55■■□□□ 1.04
NR1H3-228ENST00000525441 REM2Q8IYK8 340 aaPredicted RBP21.55■■□□□ 1.04
NR1H3-228ENST00000525441 PRDM10Q9NQV6 1147 aa21.55■■□□□ 1.04
NR1H3-228ENST00000525441 ABCF2Q9UG63 623 aa21.55■■□□□ 1.04
NR1H3-228ENST00000525441 ARID4AP29374 1257 aaPredicted RBP21.54■■□□□ 1.04
NR1H3-228ENST00000525441 DIXDC1Q155Q3 683 aa21.54■■□□□ 1.04
NR1H3-228ENST00000525441 MAP3K11Q16584 847 aa21.54■■□□□ 1.04
NR1H3-228ENST00000525441 CCDC158Q5M9N0 1113 aa21.54■■□□□ 1.04
NR1H3-228ENST00000525441 COL13A1Q5TAT6 717 aaPredicted RBP21.54■■□□□ 1.04
NR1H3-228ENST00000525441 DZIP1Q86YF9 867 aaKnown RBP21.54■■□□□ 1.04
NR1H3-228ENST00000525441 ZIC5Q96T25 663 aa21.54■■□□□ 1.04
NR1H3-228ENST00000525441 DAGLAQ9Y4D2 1042 aa21.54■■□□□ 1.04
NR1H3-228ENST00000525441 UNCXA6NJT0 531 aa21.53■■□□□ 1.04
NR1H3-228ENST00000525441 HSPA8P11142 646 aaKnown RBP21.53■■□□□ 1.04
NR1H3-228ENST00000525441 IREB2P48200 963 aaKnown RBP21.53■■□□□ 1.04
NR1H3-228ENST00000525441 LBX1P52954 281 aa21.53■■□□□ 1.04
NR1H3-228ENST00000525441 LDLRAD1Q5T700 205 aa21.53■■□□□ 1.04
NR1H3-228ENST00000525441 FAM83AQ86UY5 434 aa21.53■■□□□ 1.04
NR1H3-228ENST00000525441 SPATA5Q8NB90 893 aa21.53■■□□□ 1.04
NR1H3-228ENST00000525441 HMG20BQ9P0W2 317 aa21.53■■□□□ 1.04
NR1H3-228ENST00000525441 TTC39AQ5SRH9 613 aa21.52■■□□□ 1.04
NR1H3-228ENST00000525441 ERICH6Q7L0X2 663 aa21.52■■□□□ 1.04
NR1H3-228ENST00000525441 TMEM39BQ9GZU3 492 aa21.52■■□□□ 1.04
NR1H3-228ENST00000525441 SSC5DA1L4H1 1573 aa21.52■■□□□ 1.04
NR1H3-228ENST00000525441 CACNB3P54284 484 aa21.51■■□□□ 1.03
NR1H3-228ENST00000525441 HOOK2Q96ED9 719 aa21.51■■□□□ 1.03
NR1H3-228ENST00000525441 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
NR1H3-228ENST00000525441 TEPSINQ96N21 525 aa21.51■■□□□ 1.03
NR1H3-228ENST00000525441 DBNDD2Q9BQY9 259 aa21.51■■□□□ 1.03
NR1H3-228ENST00000525441 EXOC6BQ9Y2D4 811 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms