RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ERO1AQ96HE7 468 aa30.21■■■□□ 2.43
USP47-205ENST00000525257 TEPSINQ96N21 525 aa30.21■■■□□ 2.43
USP47-205ENST00000525257 PTPN18Q99952 460 aa30.21■■■□□ 2.43
USP47-205ENST00000525257 BICC1Q9H694 974 aaKnown RBP30.21■■■□□ 2.43
USP47-205ENST00000525257 CHAF1AQ13111 956 aaPredicted RBP30.2■■■□□ 2.43
USP47-205ENST00000525257 GRIK5Q16478 980 aa30.2■■■□□ 2.43
USP47-205ENST00000525257 VPS37DQ86XT2 251 aa30.2■■■□□ 2.43
USP47-205ENST00000525257 TMEM39BQ9GZU3 492 aa30.2■■■□□ 2.43
USP47-205ENST00000525257 UTYO14607 1347 aa30.19■■■□□ 2.42
USP47-205ENST00000525257 TESPA1A2RU30 521 aaPredicted RBP30.18■■■□□ 2.42
USP47-205ENST00000525257 LRRC24Q50LG9 513 aa30.18■■■□□ 2.42
USP47-205ENST00000525257 CNKSR2Q8WXI2 1034 aa30.18■■■□□ 2.42
USP47-205ENST00000525257 CENPFP49454 3210 aa30.18■■■□□ 2.42
USP47-205ENST00000525257 TNNI2P48788 182 aa30.17■■■□□ 2.42
USP47-205ENST00000525257 METTL24Q5JXM2 366 aa30.17■■■□□ 2.42
USP47-205ENST00000525257 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.17■■■□□ 2.42
USP47-205ENST00000525257 FBXO33Q7Z6M2 555 aa30.17■■■□□ 2.42
USP47-205ENST00000525257 FRAT2O75474 233 aaPredicted RBP30.16■■■□□ 2.42
USP47-205ENST00000525257 RABL6Q3YEC7 729 aaPredicted RBP30.16■■■□□ 2.42
USP47-205ENST00000525257 ANKRD44Q8N8A2 993 aa30.16■■■□□ 2.42
USP47-205ENST00000525257 PTPN22Q9Y2R2 807 aa30.16■■■□□ 2.42
USP47-205ENST00000525257 SP3Q02447 781 aa30.15■■■□□ 2.42
USP47-205ENST00000525257 VGLL4Q14135 290 aa30.15■■■□□ 2.42
USP47-205ENST00000525257 MS4A4AQ96JQ5 239 aa30.15■■■□□ 2.42
USP47-205ENST00000525257 EFCC1Q9HA90 598 aa30.15■■■□□ 2.42
USP47-205ENST00000525257 POTEFA5A3E0 1075 aa30.14■■■□□ 2.42
USP47-205ENST00000525257 CACNB3P54284 484 aa30.14■■■□□ 2.42
USP47-205ENST00000525257 CAVIN4Q5BKX8 364 aa30.14■■■□□ 2.42
USP47-205ENST00000525257 INTS3Q68E01 1043 aaKnown RBP30.14■■■□□ 2.42
USP47-205ENST00000525257 PCDH10Q9P2E7 1040 aa30.14■■■□□ 2.42
USP47-205ENST00000525257 MAP3K9P80192 1104 aa30.13■■■□□ 2.41
USP47-205ENST00000525257 CAP1Q01518 475 aa30.13■■■□□ 2.41
USP47-205ENST00000525257 MRPL50Q8N5N7 158 aaKnown RBP30.13■■■□□ 2.41
USP47-205ENST00000525257 TBC1D22AQ8WUA7 517 aa30.13■■■□□ 2.41
USP47-205ENST00000525257 BRI3BPQ8WY22 251 aa30.13■■■□□ 2.41
USP47-205ENST00000525257 CCL15-CCL14A0A0B4J2E2 113 aa30.12■■■□□ 2.41
USP47-205ENST00000525257 CCL15Q16663 113 aa30.12■■■□□ 2.41
USP47-205ENST00000525257 VGLL2Q8N8G2 317 aa30.12■■■□□ 2.41
USP47-205ENST00000525257 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.12■■■□□ 2.41
USP47-205ENST00000525257 KLHDC4Q8TBB5 520 aa30.12■■■□□ 2.41
USP47-205ENST00000525257 TEKT1Q969V4 418 aa30.12■■■□□ 2.41
USP47-205ENST00000525257 OTUD5Q96G74 571 aa30.12■■■□□ 2.41
USP47-205ENST00000525257 CSADQ9Y600 493 aa30.12■■■□□ 2.41
USP47-205ENST00000525257 PDE8BO95263 885 aa30.11■■■□□ 2.41
USP47-205ENST00000525257 HDLBPQ00341 1268 aaKnown RBP30.11■■■□□ 2.41
USP47-205ENST00000525257 ZNF521Q96K83 1311 aa30.11■■■□□ 2.41
USP47-205ENST00000525257 MKI67P46013 3256 aaKnown RBP30.11■■■□□ 2.41
USP47-205ENST00000525257 RBBP6Q7Z6E9 1792 aaKnown RBP30.1■■■□□ 2.41
USP47-205ENST00000525257 ZNF316A6NFI3 1004 aaPredicted RBP30.1■■■□□ 2.41
USP47-205ENST00000525257 BCAMP50895 628 aa30.1■■■□□ 2.41
USP47-205ENST00000525257 GTF2A2P52657 109 aa30.1■■■□□ 2.41
USP47-205ENST00000525257 TAF1CQ15572 869 aaPredicted RBP30.1■■■□□ 2.41
USP47-205ENST00000525257 ZFYVE28Q9HCC9 887 aa30.08■■■□□ 2.41
USP47-205ENST00000525257 KIAA0100Q14667 2235 aaKnown RBP30.07■■■□□ 2.4
USP47-205ENST00000525257 BRCA2P51587 3418 aa30.07■■■□□ 2.4
USP47-205ENST00000525257 PTPRCP08575 1304 aa30.07■■■□□ 2.4
USP47-205ENST00000525257 FAM43AQ8N2R8 423 aa30.07■■■□□ 2.4
USP47-205ENST00000525257 ARMC5Q96C12 935 aa30.07■■■□□ 2.4
USP47-205ENST00000525257 ZDHHC15Q96MV8 337 aa30.07■■■□□ 2.4
USP47-205ENST00000525257 TMOD2Q9NZR1 351 aa30.07■■■□□ 2.4
USP47-205ENST00000525257 SPDYE5A6NIY4 337 aa30.06■■■□□ 2.4
USP47-205ENST00000525257 SNCAIPQ9Y6H5 919 aa30.06■■■□□ 2.4
USP47-205ENST00000525257 MYH13Q9UKX3 1938 aa30.05■■■□□ 2.4
USP47-205ENST00000525257 PUM3Q15397 648 aaKnown RBP30.05■■■□□ 2.4
USP47-205ENST00000525257 WRNIP1Q96S55 665 aa30.05■■■□□ 2.4
USP47-205ENST00000525257 MAST3O60307 1309 aa30.04■■■□□ 2.4
USP47-205ENST00000525257 IFIT1P09914 478 aaKnown RBP30.04■■■□□ 2.4
USP47-205ENST00000525257 APOBEC3HQ6NTF7 200 aaKnown RBP30.04■■■□□ 2.4
USP47-205ENST00000525257 SSH1Q8WYL5 1049 aa30.04■■■□□ 2.4
USP47-205ENST00000525257 ZKSCAN4Q969J2 545 aaPredicted RBP30.04■■■□□ 2.4
USP47-205ENST00000525257 USP44Q9H0E7 712 aa30.04■■■□□ 2.4
USP47-205ENST00000525257 FGFR2P21802 821 aa30.03■■■□□ 2.4
USP47-205ENST00000525257 FAM83AQ86UY5 434 aa30.03■■■□□ 2.4
USP47-205ENST00000525257 KIF16BQ96L93 1317 aa30.02■■■□□ 2.4
USP47-205ENST00000525257 EN2P19622 333 aaPredicted RBP30.02■■■□□ 2.4
USP47-205ENST00000525257 ERO1BQ86YB8 467 aa30.02■■■□□ 2.4
USP47-205ENST00000525257 MRIQ9BWK5 157 aa30.02■■■□□ 2.4
USP47-205ENST00000525257 SUGT1Q9Y2Z0 365 aa30.02■■■□□ 2.4
USP47-205ENST00000525257 PTCH2Q9Y6C5 1203 aa30.02■■■□□ 2.4
USP47-205ENST00000525257 ARHGEF6Q15052 776 aa30.01■■■□□ 2.39
USP47-205ENST00000525257 FKBP1CQ5VVH2 108 aa30.01■■■□□ 2.39
USP47-205ENST00000525257 HOOK2Q96ED9 719 aa30.01■■■□□ 2.39
USP47-205ENST00000525257 ZSWIM8A7E2V4 1837 aa30.01■■■□□ 2.39
USP47-205ENST00000525257 CETPP11597 493 aa30■■■□□ 2.39
USP47-205ENST00000525257 ZNF333Q96JL9 665 aa30■■■□□ 2.39
USP47-205ENST00000525257 EYA2O00167 538 aa29.99■■■□□ 2.39
USP47-205ENST00000525257 IRF6O14896 467 aa29.99■■■□□ 2.39
USP47-205ENST00000525257 WDHD1O75717 1129 aaPredicted RBP29.99■■■□□ 2.39
USP47-205ENST00000525257 SLC5A1P13866 664 aa29.99■■■□□ 2.39
USP47-205ENST00000525257 SLC9C1Q4G0N8 1177 aa29.99■■■□□ 2.39
USP47-205ENST00000525257 HHIPL2Q6UWX4 724 aa29.99■■■□□ 2.39
USP47-205ENST00000525257 GCC1Q96CN9 775 aa29.99■■■□□ 2.39
USP47-205ENST00000525257 RPAP1Q9BWH6 1393 aaPredicted RBP29.99■■■□□ 2.39
USP47-205ENST00000525257 BTBD19C9JJ37 291 aa29.98■■■□□ 2.39
USP47-205ENST00000525257 E9PSI1 815 aa29.98■■■□□ 2.39
USP47-205ENST00000525257 RFX5P48382 616 aaPredicted RBP29.98■■■□□ 2.39
USP47-205ENST00000525257 SNAPC2Q13487 334 aa29.98■■■□□ 2.39
USP47-205ENST00000525257 DCAF15Q66K64 600 aa29.98■■■□□ 2.39
USP47-205ENST00000525257 TMEM106CQ9BVX2 250 aa29.98■■■□□ 2.39
USP47-205ENST00000525257 ZEB1P37275 1124 aaPredicted RBP29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms