RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GTF2IP78347 998 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 CHAF1AQ13111 956 aaPredicted RBP7.97□□□□□ -1.13
CD44-214ENST00000525211 MFSD10Q14728 455 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 HSP90AB4PQ58FF6 505 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 SOGA3Q5TF21 947 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 ASTLQ6HA08 431 aaPredicted RBP7.97□□□□□ -1.13
CD44-214ENST00000525211 ERC1Q8IUD2 1116 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 BOLA2Q9H3K6 86 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 AKAP11Q9UKA4 1901 aa7.97□□□□□ -1.13
CD44-214ENST00000525211 POTECB2RU33 542 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 EGFRP00533 1210 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 CYP2E1P05181 493 aaPredicted RBP7.96□□□□□ -1.14
CD44-214ENST00000525211 ARID4AP29374 1257 aaPredicted RBP7.96□□□□□ -1.14
CD44-214ENST00000525211 PDE1AP54750 535 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 DACT2Q5SW24 774 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 ERICH6BQ5W0A0 696 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 CENPQQ7L2Z9 268 aaPredicted RBP7.96□□□□□ -1.14
CD44-214ENST00000525211 CLASRPQ8N2M8 674 aaKnown RBP7.96□□□□□ -1.14
CD44-214ENST00000525211 SUPT20HQ8NEM7 779 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 GMLQ99445 158 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 EYA3Q99504 573 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 COA1Q9GZY4 146 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 AKAP2Q9Y2D5 859 aa7.96□□□□□ -1.14
CD44-214ENST00000525211 ADAMTSL1Q8N6G6 1762 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 GABBR2O75899 941 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 VIL1P09327 827 aaKnown RBP7.95□□□□□ -1.14
CD44-214ENST00000525211 IFIT2P09913 472 aaKnown RBP7.95□□□□□ -1.14
CD44-214ENST00000525211 GSPT1P15170 499 aaKnown RBP7.95□□□□□ -1.14
CD44-214ENST00000525211 PRDX5P30044 214 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 TTC39AQ5SRH9 613 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 ZNF804AQ7Z570 1209 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 NIM1KQ8IY84 436 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 PDCD7Q8N8D1 485 aaKnown RBP7.95□□□□□ -1.14
CD44-214ENST00000525211 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 DDX27Q96GQ7 796 aaKnown RBP7.95□□□□□ -1.14
CD44-214ENST00000525211 TMX4Q9H1E5 349 aaPredicted RBP7.95□□□□□ -1.14
CD44-214ENST00000525211 STAP2Q9UGK3 403 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 ZNRF3Q9ULT6 936 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 MYO5AQ9Y4I1 1855 aaKnown RBP7.95□□□□□ -1.14
CD44-214ENST00000525211 FAM205AQ6ZU69 1335 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 DICER1Q9UPY3 1922 aaKnown RBP7.95□□□□□ -1.14
CD44-214ENST00000525211 TIAM2Q8IVF5 1701 aa7.95□□□□□ -1.14
CD44-214ENST00000525211 F8W031 263 aaPredicted RBP7.94□□□□□ -1.14
CD44-214ENST00000525211 ATP5JP18859 108 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 MX1P20591 662 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 YY1P25490 414 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 EPS15P42566 896 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 GMPSP49915 693 aaPredicted RBP7.94□□□□□ -1.14
CD44-214ENST00000525211 SCNN1DP51172 638 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 IRX5P78411 483 aaPredicted RBP7.94□□□□□ -1.14
CD44-214ENST00000525211 GRIPAP1Q4V328 841 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 CAVIN4Q5BKX8 364 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 GORABQ5T7V8 394 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 TTLL5Q6EMB2 1281 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 DNAJC2Q99543 621 aaKnown RBP7.94□□□□□ -1.14
CD44-214ENST00000525211 ECHDC1Q9NTX5 307 aa7.94□□□□□ -1.14
CD44-214ENST00000525211 ASTN2O75129 1339 aaPredicted RBP7.94□□□□□ -1.14
CD44-214ENST00000525211 USP17L3A6NCW0 530 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 USP17L4A6NCW7 530 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 GOLIM4O00461 696 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 POTEIP0CG38 1075 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 POTEJP0CG39 1038 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 RGS3P49796 1198 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 CIAPIN1Q6FI81 312 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 RSBN1LQ6PCB5 846 aaPredicted RBP7.93□□□□□ -1.14
CD44-214ENST00000525211 DLK2Q6UY11 383 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 USP17L1Q7RTZ2 530 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 PODNQ7Z5L7 613 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 ADGRA1Q86SQ6 560 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 VPS37DQ86XT2 251 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 SPATA5Q8NB90 893 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 TRPM4Q8TD43 1214 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 ZNF526Q8TF50 670 aaPredicted RBP7.93□□□□□ -1.14
CD44-214ENST00000525211 ZNF512BQ96KM6 892 aaPredicted RBP7.93□□□□□ -1.14
CD44-214ENST00000525211 HAUS7Q99871 368 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 VPS33BQ9H267 617 aa7.93□□□□□ -1.14
CD44-214ENST00000525211 SCAF8Q9UPN6 1271 aaKnown RBP7.93□□□□□ -1.14
CD44-214ENST00000525211 PSME4Q14997 1843 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 G3V3G9 751 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 UQCRFS1P1P0C7P4 283 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 HIRAP54198 1017 aaPredicted RBP7.92□□□□□ -1.14
CD44-214ENST00000525211 DIXDC1Q155Q3 683 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 CCDC158Q5M9N0 1113 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 MFSD14BQ5SR56 506 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 IER5LQ5T953 404 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 STRIP1Q5VSL9 837 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 KIAA0825Q8IV33 1275 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 MICALL2Q8IY33 904 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 JDP2Q8WYK2 163 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 IL25Q9H293 177 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 OSBPL3Q9H4L5 887 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 OCEL1Q9H607 264 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 NMRK2Q9NPI5 230 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 CEP350Q5VT06 3117 aa7.92□□□□□ -1.14
CD44-214ENST00000525211 TCRBV5S4A2TA0A5A2 114 aa7.91□□□□□ -1.14
CD44-214ENST00000525211 GLTPD2A6NH11 291 aa7.91□□□□□ -1.14
CD44-214ENST00000525211 FRAT2O75474 233 aaPredicted RBP7.91□□□□□ -1.14
CD44-214ENST00000525211 EIF6P56537 245 aaKnown RBP7.91□□□□□ -1.14
CD44-214ENST00000525211 TTC22Q5TAA0 569 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms