RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 CAVIN4Q5BKX8 364 aa21.58■■□□□ 1.05
TSKU-202ENST00000525167 TEPSINQ96N21 525 aa21.58■■□□□ 1.05
TSKU-202ENST00000525167 TDRD3Q9H7E2 651 aaKnown RBP21.58■■□□□ 1.05
TSKU-202ENST00000525167 GJA5P36382 358 aa21.57■■□□□ 1.04
TSKU-202ENST00000525167 INTS3Q68E01 1043 aaKnown RBP21.57■■□□□ 1.04
TSKU-202ENST00000525167 OTOP1Q7RTM1 612 aa21.57■■□□□ 1.04
TSKU-202ENST00000525167 TRIM17Q9Y577 477 aa21.57■■□□□ 1.04
TSKU-202ENST00000525167 OTOFQ9HC10 1997 aa21.57■■□□□ 1.04
TSKU-202ENST00000525167 KIF16BQ96L93 1317 aa21.56■■□□□ 1.04
TSKU-202ENST00000525167 PDE8BO95263 885 aa21.56■■□□□ 1.04
TSKU-202ENST00000525167 CRHR2Q13324 411 aa21.56■■□□□ 1.04
TSKU-202ENST00000525167 METTL24Q5JXM2 366 aa21.56■■□□□ 1.04
TSKU-202ENST00000525167 ANKRD44Q8N8A2 993 aa21.56■■□□□ 1.04
TSKU-202ENST00000525167 VGLL2Q8N8G2 317 aa21.56■■□□□ 1.04
TSKU-202ENST00000525167 OPTNQ96CV9 577 aa21.56■■□□□ 1.04
TSKU-202ENST00000525167 MRIQ9BWK5 157 aa21.56■■□□□ 1.04
TSKU-202ENST00000525167 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.56■■□□□ 1.04
TSKU-202ENST00000525167 MRPL50Q8N5N7 158 aaKnown RBP21.55■■□□□ 1.04
TSKU-202ENST00000525167 PCDH10Q9P2E7 1040 aa21.55■■□□□ 1.04
TSKU-202ENST00000525167 SUGT1Q9Y2Z0 365 aa21.55■■□□□ 1.04
TSKU-202ENST00000525167 HTTP42858 3142 aa21.54■■□□□ 1.04
TSKU-202ENST00000525167 FRAT2O75474 233 aaPredicted RBP21.54■■□□□ 1.04
TSKU-202ENST00000525167 LRRC24Q50LG9 513 aa21.54■■□□□ 1.04
TSKU-202ENST00000525167 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.54■■□□□ 1.04
TSKU-202ENST00000525167 TEKT1Q969V4 418 aa21.54■■□□□ 1.04
TSKU-202ENST00000525167 PTPN18Q99952 460 aa21.54■■□□□ 1.04
TSKU-202ENST00000525167 ELP3Q9H9T3 547 aa21.54■■□□□ 1.04
TSKU-202ENST00000525167 MAST3O60307 1309 aa21.54■■□□□ 1.04
TSKU-202ENST00000525167 TCP10L2B9ZVM9 353 aa21.53■■□□□ 1.04
TSKU-202ENST00000525167 MAP3K9P80192 1104 aa21.53■■□□□ 1.04
TSKU-202ENST00000525167 FKBP1CQ5VVH2 108 aa21.53■■□□□ 1.04
TSKU-202ENST00000525167 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.53■■□□□ 1.04
TSKU-202ENST00000525167 MS4A4AQ96JQ5 239 aa21.53■■□□□ 1.04
TSKU-202ENST00000525167 ZDHHC15Q96MV8 337 aa21.53■■□□□ 1.04
TSKU-202ENST00000525167 TMEM39BQ9GZU3 492 aa21.53■■□□□ 1.04
TSKU-202ENST00000525167 CSADQ9Y600 493 aa21.53■■□□□ 1.04
TSKU-202ENST00000525167 E9PSI1 815 aa21.52■■□□□ 1.04
TSKU-202ENST00000525167 GTF2A2P52657 109 aa21.52■■□□□ 1.04
TSKU-202ENST00000525167 SP3Q02447 781 aa21.52■■□□□ 1.04
TSKU-202ENST00000525167 CHAF1AQ13111 956 aaPredicted RBP21.52■■□□□ 1.04
TSKU-202ENST00000525167 VGLL4Q14135 290 aa21.52■■□□□ 1.04
TSKU-202ENST00000525167 HOOK2Q96ED9 719 aa21.52■■□□□ 1.04
TSKU-202ENST00000525167 PTPN22Q9Y2R2 807 aa21.52■■□□□ 1.04
TSKU-202ENST00000525167 PUM3Q15397 648 aaKnown RBP21.51■■□□□ 1.03
TSKU-202ENST00000525167 FAM83AQ86UY5 434 aa21.51■■□□□ 1.03
TSKU-202ENST00000525167 CDAN1Q8IWY9 1227 aa21.51■■□□□ 1.03
TSKU-202ENST00000525167 CD99L2Q8TCZ2 262 aa21.51■■□□□ 1.03
TSKU-202ENST00000525167 EFCC1Q9HA90 598 aa21.51■■□□□ 1.03
TSKU-202ENST00000525167 TMOD2Q9NZR1 351 aa21.51■■□□□ 1.03
TSKU-202ENST00000525167 IQSEC3Q9UPP2 1182 aaPredicted RBP21.51■■□□□ 1.03
TSKU-202ENST00000525167 IFIT1P09914 478 aaKnown RBP21.5■■□□□ 1.03
TSKU-202ENST00000525167 ARHGEF6Q15052 776 aa21.5■■□□□ 1.03
TSKU-202ENST00000525167 GRIK5Q16478 980 aa21.5■■□□□ 1.03
TSKU-202ENST00000525167 USP44Q9H0E7 712 aa21.5■■□□□ 1.03
TSKU-202ENST00000525167 RPAP1Q9BWH6 1393 aaPredicted RBP21.49■■□□□ 1.03
TSKU-202ENST00000525167 FGFR2P21802 821 aa21.49■■□□□ 1.03
TSKU-202ENST00000525167 BRI3BPQ8WY22 251 aa21.49■■□□□ 1.03
TSKU-202ENST00000525167 ARMC5Q96C12 935 aa21.49■■□□□ 1.03
TSKU-202ENST00000525167 ZCCHC17Q9NP64 241 aaKnown RBP21.49■■□□□ 1.03
TSKU-202ENST00000525167 RBBP6Q7Z6E9 1792 aaKnown RBP21.48■■□□□ 1.03
TSKU-202ENST00000525167 CCL15-CCL14A0A0B4J2E2 113 aa21.48■■□□□ 1.03
TSKU-202ENST00000525167 SPDYE5A6NIY4 337 aa21.48■■□□□ 1.03
TSKU-202ENST00000525167 BCAMP50895 628 aa21.48■■□□□ 1.03
TSKU-202ENST00000525167 CCL15Q16663 113 aa21.48■■□□□ 1.03
TSKU-202ENST00000525167 HHIPL2Q6UWX4 724 aa21.48■■□□□ 1.03
TSKU-202ENST00000525167 SSH1Q8WYL5 1049 aa21.48■■□□□ 1.03
TSKU-202ENST00000525167 ZFYVE28Q9HCC9 887 aa21.48■■□□□ 1.03
TSKU-202ENST00000525167 WDHD1O75717 1129 aaPredicted RBP21.47■■□□□ 1.03
TSKU-202ENST00000525167 TAF1CQ15572 869 aaPredicted RBP21.47■■□□□ 1.03
TSKU-202ENST00000525167 ALDH1L2Q3SY69 923 aa21.47■■□□□ 1.03
TSKU-202ENST00000525167 APOBEC3HQ6NTF7 200 aaKnown RBP21.47■■□□□ 1.03
TSKU-202ENST00000525167 KLHDC4Q8TBB5 520 aa21.47■■□□□ 1.03
TSKU-202ENST00000525167 OTUD5Q96G74 571 aa21.47■■□□□ 1.03
TSKU-202ENST00000525167 EYA2O00167 538 aa21.46■■□□□ 1.03
TSKU-202ENST00000525167 ERO1BQ86YB8 467 aa21.46■■□□□ 1.03
TSKU-202ENST00000525167 WDR66Q8TBY9 1149 aa21.46■■□□□ 1.03
TSKU-202ENST00000525167 CNKSR2Q8WXI2 1034 aa21.46■■□□□ 1.03
TSKU-202ENST00000525167 LPIN2Q92539 896 aa21.46■■□□□ 1.03
TSKU-202ENST00000525167 FBXO3Q9UK99 471 aa21.46■■□□□ 1.03
TSKU-202ENST00000525167 CETPP11597 493 aa21.45■■□□□ 1.02
TSKU-202ENST00000525167 SLC5A1P13866 664 aa21.45■■□□□ 1.02
TSKU-202ENST00000525167 CACNB3P54284 484 aa21.45■■□□□ 1.02
TSKU-202ENST00000525167 DCAF15Q66K64 600 aa21.45■■□□□ 1.02
TSKU-202ENST00000525167 GCC1Q96CN9 775 aa21.45■■□□□ 1.02
TSKU-202ENST00000525167 WRNIP1Q96S55 665 aa21.45■■□□□ 1.02
TSKU-202ENST00000525167 SNCAIPQ9Y6H5 919 aa21.45■■□□□ 1.02
TSKU-202ENST00000525167 RFX5P48382 616 aaPredicted RBP21.44■■□□□ 1.02
TSKU-202ENST00000525167 SLFN5Q08AF3 891 aa21.44■■□□□ 1.02
TSKU-202ENST00000525167 POTEFA5A3E0 1075 aa21.43■■□□□ 1.02
TSKU-202ENST00000525167 PPIL2Q13356 520 aa21.43■■□□□ 1.02
TSKU-202ENST00000525167 SNAPC2Q13487 334 aa21.43■■□□□ 1.02
TSKU-202ENST00000525167 FAM43AQ8N2R8 423 aa21.43■■□□□ 1.02
TSKU-202ENST00000525167 CENPFP49454 3210 aa21.43■■□□□ 1.02
TSKU-202ENST00000525167 TLR2O60603 784 aa21.42■■□□□ 1.02
TSKU-202ENST00000525167 CIAO1O76071 339 aa21.42■■□□□ 1.02
TSKU-202ENST00000525167 MYH13Q9UKX3 1938 aa21.41■■□□□ 1.02
TSKU-202ENST00000525167 ZBTB22O15209 634 aa21.41■■□□□ 1.02
TSKU-202ENST00000525167 CAP1Q01518 475 aa21.41■■□□□ 1.02
TSKU-202ENST00000525167 PPATQ06203 517 aa21.41■■□□□ 1.02
TSKU-202ENST00000525167 NBPF11Q86T75 865 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms