RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 TRIM26Q12899 539 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-209ENST00000525132 NOGQ13253 232 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 MTFR1Q15390 333 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 EML3Q32P44 896 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 OXLD1Q5BKU9 147 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 DEPDC4Q8N2C3 294 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 MYLIPQ8WY64 445 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 ESYT1Q9BSJ8 1104 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 ZNF395Q9H8N7 513 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-209ENST00000525132 ARHGEF10LQ9HCE6 1279 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 IQSEC3Q9UPP2 1182 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-209ENST00000525132 THRAP3Q9Y2W1 955 aaKnown RBP5.12□□□□□ -1.59
CSDE1-209ENST00000525132 TTC21AQ8NDW8 1320 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 MTUS2Q5JR59 1369 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 KIAA1107Q9UPP5 1409 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 RIMS2Q9UQ26 1411 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 FAM208BQ5VWN6 2430 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 TTLL8A6PVC2 850 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 MYCP01106 439 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-209ENST00000525132 INHAP05111 366 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 BMP2P12643 396 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 GTF2IP78347 998 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 PTK7Q13308 1070 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 SCARF1Q14162 830 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 C6orf118Q5T5N4 469 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 ATXN2LQ8WWM7 1075 aaKnown RBP5.11□□□□□ -1.59
CSDE1-209ENST00000525132 SIRT1Q96EB6 747 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 NR2E3Q9Y5X4 410 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 SCN11AQ9UI33 1791 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 ARFGEF1Q9Y6D6 1849 aa5.11□□□□□ -1.59
CSDE1-209ENST00000525132 SLC35F4A4IF30 521 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 FAM196BA6NMK8 535 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 M0R2N6 131 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 ACACBO00763 2458 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 EGFRP00533 1210 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 BMP8BP34820 402 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 GSK3AP49840 483 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 GDF10P55107 478 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 CRTC2Q53ET0 693 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-209ENST00000525132 DALRD3Q5D0E6 543 aaKnown RBP5.1□□□□□ -1.59
CSDE1-209ENST00000525132 SLC27A3Q5K4L6 730 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 TMEFF1Q8IYR6 380 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.1□□□□□ -1.59
CSDE1-209ENST00000525132 CNKSR1Q969H4 720 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 UIMC1Q96RL1 719 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 QRICH2Q9H0J4 1663 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 RAB6BQ9NRW1 208 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 NOD1Q9Y239 953 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 USP3Q9Y6I4 520 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 HTTP42858 3142 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 FBN3Q75N90 2809 aa5.1□□□□□ -1.59
CSDE1-209ENST00000525132 NCOR1O75376 2440 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 TIAM2Q8IVF5 1701 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 CCDC18Q5T9S5 1454 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 IQCA1LA6NCM1 817 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 TRAF5O00463 557 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 VSIG8P0DPA2 414 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 KIF23Q02241 960 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-209ENST00000525132 PSME1Q06323 249 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 WDR44Q5JSH3 913 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 LARGE2Q8N3Y3 721 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 CCDC82Q8N4S0 544 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 ZNF358Q9NW07 568 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 PIM2Q9P1W9 311 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 DOPEY1Q5JWR5 2465 aa5.09□□□□□ -1.59
CSDE1-209ENST00000525132 BPTFQ12830 3046 aa5.09□□□□□ -1.6
CSDE1-209ENST00000525132 ARHGEF10O15013 1369 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 UPP2O95045 317 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 THBS1P07996 1170 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 FOSL2P15408 326 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 CENPCQ03188 943 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 ELOAQ14241 798 aaKnown RBP5.08□□□□□ -1.6
CSDE1-209ENST00000525132 TRIM50Q86XT4 487 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 NPAS3Q8IXF0 933 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 OGFOD1Q8N543 542 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 HHIPL1Q96JK4 782 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 GDF15Q99988 308 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 KCNH6Q9H252 994 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 ZMIZ1Q9ULJ6 1067 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 ITSN1Q15811 1721 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 XIRP2A4UGR9 3374 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 USP24Q9UPU5 2620 aa5.08□□□□□ -1.6
CSDE1-209ENST00000525132 MAP1BP46821 2468 aaKnown RBP5.07□□□□□ -1.6
CSDE1-209ENST00000525132 CLIP1P30622 1438 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 BRCA1P38398 1863 aaKnown RBP5.07□□□□□ -1.6
CSDE1-209ENST00000525132 ASPMQ8IZT6 3477 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 MYO18BQ8IUG5 2567 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 PRR33A8MZF0 331 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L15C9J2P7 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L10C9JJH3 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L13C9JLJ4 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L12C9JPN9 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L11C9JVI0 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L21D6R901 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L18D6R9N7 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L22D6RA61 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L17D6RBQ6 530 aa5.07□□□□□ -1.6
CSDE1-209ENST00000525132 USP17L19D6RCP7 530 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms