RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 ZMYM5Q9UJ78 669 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 KCNMB2Q9Y691 235 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 TLL2Q9Y6L7 1015 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 WASHC2CQ9Y4E1 1318 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 PDE8AO60658 829 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 ADH1CP00326 375 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 TFE3P19532 575 aaPredicted RBP7.05□□□□□ -1.28
USP47-204ENST00000525078 POU3F3P20264 500 aaPredicted RBP7.05□□□□□ -1.28
USP47-204ENST00000525078 GUCY2FP51841 1108 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 PKDCCQ504Y2 493 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 PERM1Q5SV97 790 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 BICDL1Q6ZP65 573 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 GK5Q6ZS86 529 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 MYO1HQ8N1T3 1032 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 SAMD3Q8N6K7 520 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 ST13P5Q8NFI4 369 aaPredicted RBP7.05□□□□□ -1.28
USP47-204ENST00000525078 FBXO27Q8NI29 283 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 LIN7BQ9HAP6 207 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 ARNT2Q9HBZ2 717 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 LATS2Q9NRM7 1088 aa7.05□□□□□ -1.28
USP47-204ENST00000525078 GNL3LQ9NVN8 582 aaKnown RBP7.05□□□□□ -1.28
USP47-204ENST00000525078 LAS1LQ9Y4W2 734 aaKnown RBP7.05□□□□□ -1.28
USP47-204ENST00000525078 SHTN1A0MZ66 631 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 PPEF1O14829 653 aaPredicted RBP7.04□□□□□ -1.28
USP47-204ENST00000525078 XYLBO75191 536 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 SCGB1D2O95969 90 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 F13A1P00488 732 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 IMPDH2P12268 514 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 EPB42P16452 691 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 TATP17735 454 aaPredicted RBP7.04□□□□□ -1.28
USP47-204ENST00000525078 DHX8Q14562 1220 aaKnown RBP7.04□□□□□ -1.28
USP47-204ENST00000525078 TMEM67Q5HYA8 995 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 SLC4A10Q6U841 1118 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 KSR2Q6VAB6 950 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 BTLAQ7Z6A9 289 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 C14orf80Q86SX3 495 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 ANKLE1Q8NAG6 615 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 JARID2Q92833 1246 aaPredicted RBP7.04□□□□□ -1.28
USP47-204ENST00000525078 ZFYVE1Q9HBF4 777 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 SFMBT1Q9UHJ3 866 aa7.04□□□□□ -1.28
USP47-204ENST00000525078 B2RBV5 119 aa7.03□□□□□ -1.28
USP47-204ENST00000525078 GDF9O60383 454 aa7.03□□□□□ -1.28
USP47-204ENST00000525078 HLTFQ14527 1009 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP47-204ENST00000525078 C6orf15Q6UXA7 325 aaPredicted RBP7.03□□□□□ -1.28
USP47-204ENST00000525078 BNC2Q6ZN30 1099 aaPredicted RBP7.03□□□□□ -1.28
USP47-204ENST00000525078 LSRQ86X29 649 aaPredicted RBP7.03□□□□□ -1.28
USP47-204ENST00000525078 CHPFQ8IZ52 775 aa7.03□□□□□ -1.28
USP47-204ENST00000525078 NAP1L4Q99733 375 aaKnown RBP7.03□□□□□ -1.28
USP47-204ENST00000525078 ABCB6Q9NP58 842 aa7.03□□□□□ -1.28
USP47-204ENST00000525078 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
USP47-204ENST00000525078 MAFGO15525 162 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 BPNT1O95861 308 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 NR3C2P08235 984 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 FAM153BP0C7A2 387 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 CPEP16870 476 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 PTGIRP43119 386 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 RAB27AP51159 221 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 CASP7P55210 303 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 MCL1Q07820 350 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 PABPC4Q13310 644 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP47-204ENST00000525078 VPS72Q15906 364 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 RC3H1Q5TC82 1133 aaKnown RBP7.02□□□□□ -1.29
USP47-204ENST00000525078 NLRP13Q86W25 1043 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 FAM178BQ8IXR5 827 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 PLD4Q96BZ4 506 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 SLC26A8Q96RN1 970 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 LRRC3Q9BY71 257 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 MIR1-1HGQ9H1L0 117 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 BRMS1Q9HCU9 246 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 ZIM2Q9NZV7 527 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 ZNRF3Q9ULT6 936 aa7.02□□□□□ -1.29
USP47-204ENST00000525078 A0A087X0B3 334 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 A0A0U1RQG5 324 aaPredicted RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 IFRD1O00458 451 aaPredicted RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 KATNA1O75449 491 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 FOSP01100 380 aaPredicted RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 VEGFBP49765 207 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 RPS26P62854 115 aaKnown RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 SETQ01105 290 aaPredicted RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 MPP2Q14168 576 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 SLC27A3Q5K4L6 730 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 ZNF697Q5TEC3 545 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 EEPD1Q7L9B9 569 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 GATAD2BQ8WXI9 593 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 ZNF669Q96BR6 464 aaPredicted RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 SCYL1Q96KG9 808 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 SMAD5Q99717 465 aaKnown RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 ARPC5LQ9BPX5 153 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 ZDHHC3Q9NYG2 299 aa7.01□□□□□ -1.29
USP47-204ENST00000525078 GPC6Q9Y625 555 aaPredicted RBP7.01□□□□□ -1.29
USP47-204ENST00000525078 PHF20L1A8MW92 1017 aa7□□□□□ -1.29
USP47-204ENST00000525078 PDE6BP35913 854 aa7□□□□□ -1.29
USP47-204ENST00000525078 CLCQ05315 142 aa7□□□□□ -1.29
USP47-204ENST00000525078 PEAR1Q5VY43 1037 aaPredicted RBP7□□□□□ -1.29
USP47-204ENST00000525078 CCDC84Q86UT8 332 aaPredicted RBP7□□□□□ -1.29
USP47-204ENST00000525078 REXO1Q8N1G1 1221 aaKnown RBP7□□□□□ -1.29
USP47-204ENST00000525078 NME8Q8N427 588 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms