RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 ERO1AQ96HE7 468 aa8.17□□□□□ -1.1
NUP98-213ENST00000524563 CLMNQ96JQ2 1002 aa8.17□□□□□ -1.1
NUP98-213ENST00000524563 USP44Q9H0E7 712 aa8.17□□□□□ -1.1
NUP98-213ENST00000524563 DEFB129Q9H1M3 183 aa8.17□□□□□ -1.1
NUP98-213ENST00000524563 SPDYE2BA6NHP3 402 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 SNAP23O00161 211 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 SPDYE6P0CI01 402 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 TM4SF4P48230 202 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 TNNI2P48788 182 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 MFSD14BQ5SR56 506 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 ZKSCAN2Q63HK3 967 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 LMBR1LQ6UX01 489 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 LDHAL6AQ6ZMR3 332 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 IFNL1Q8IU54 200 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 ANKRD44Q8N8A2 993 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 CD99L2Q8TCZ2 262 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 CLUAP1Q96AJ1 413 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 ZNF594Q96JF6 807 aaPredicted RBP8.16□□□□□ -1.1
NUP98-213ENST00000524563 BICC1Q9H694 974 aaKnown RBP8.16□□□□□ -1.1
NUP98-213ENST00000524563 ELP3Q9H9T3 547 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 TTF2Q9UNY4 1162 aaKnown RBP8.16□□□□□ -1.1
NUP98-213ENST00000524563 CSADQ9Y600 493 aa8.16□□□□□ -1.1
NUP98-213ENST00000524563 TAF1CQ15572 869 aaPredicted RBP8.15□□□□□ -1.1
NUP98-213ENST00000524563 RABL6Q3YEC7 729 aaPredicted RBP8.15□□□□□ -1.1
NUP98-213ENST00000524563 NOM1Q5C9Z4 860 aaKnown RBP8.15□□□□□ -1.1
NUP98-213ENST00000524563 INTS3Q68E01 1043 aaKnown RBP8.15□□□□□ -1.1
NUP98-213ENST00000524563 ANKRD13AQ8IZ07 590 aa8.15□□□□□ -1.1
NUP98-213ENST00000524563 CERS5Q8N5B7 392 aa8.15□□□□□ -1.1
NUP98-213ENST00000524563 TMEM57Q8N5G2 664 aa8.15□□□□□ -1.1
NUP98-213ENST00000524563 GCC1Q96CN9 775 aa8.15□□□□□ -1.1
NUP98-213ENST00000524563 MEIS3Q99687 375 aa8.15□□□□□ -1.1
NUP98-213ENST00000524563 PCDHAC2Q9Y5I4 1007 aa8.15□□□□□ -1.1
NUP98-213ENST00000524563 MAST3O60307 1309 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 TCP10L2B9ZVM9 353 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 IGF2BP3O00425 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
NUP98-213ENST00000524563 IPO8O15397 1037 aaKnown RBP8.14□□□□□ -1.11
NUP98-213ENST00000524563 RLBP1P12271 317 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 IL1R1P14778 569 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 GYG1P46976 350 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 INHBEP58166 350 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 FKBP1AP62942 108 aaKnown RBP8.14□□□□□ -1.11
NUP98-213ENST00000524563 IRX6P78412 446 aaPredicted RBP8.14□□□□□ -1.11
NUP98-213ENST00000524563 CRHR2Q13324 411 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 RASA3Q14644 834 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 ARHGEF6Q15052 776 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 LDLRAD1Q5T700 205 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 NBPF12Q5TAG4 269 aaPredicted RBP8.14□□□□□ -1.11
NUP98-213ENST00000524563 OTOP1Q7RTM1 612 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 OPTNQ96CV9 577 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 ZBED3Q96IU2 234 aaPredicted RBP8.14□□□□□ -1.11
NUP98-213ENST00000524563 EFCC1Q9HA90 598 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 RCAN3Q9UKA8 241 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 IQSEC3Q9UPP2 1182 aaPredicted RBP8.14□□□□□ -1.11
NUP98-213ENST00000524563 TRIOBPQ9H2D6 2365 aa8.14□□□□□ -1.11
NUP98-213ENST00000524563 DOCK3Q8IZD9 2030 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 MAST2Q6P0Q8 1798 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 CCL15-CCL14A0A0B4J2E2 113 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 UBTFL1P0CB47 393 aaPredicted RBP8.13□□□□□ -1.11
NUP98-213ENST00000524563 HIBADHP31937 336 aaKnown RBP8.13□□□□□ -1.11
NUP98-213ENST00000524563 KIF22Q14807 665 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 CCL15Q16663 113 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 SLC4A8Q2Y0W8 1093 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 SLC9C1Q4G0N8 1177 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 CAVIN4Q5BKX8 364 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 C15orf52Q6ZUT6 534 aaKnown RBP8.13□□□□□ -1.11
NUP98-213ENST00000524563 MTMR14Q8NCE2 650 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 OTUD5Q96G74 571 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 TMEM106CQ9BVX2 250 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 R3HDMLQ9H3Y0 253 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 TDRD3Q9H7E2 651 aaKnown RBP8.13□□□□□ -1.11
NUP98-213ENST00000524563 PCDH10Q9P2E7 1040 aa8.13□□□□□ -1.11
NUP98-213ENST00000524563 ZNF70Q9UC06 446 aaPredicted RBP8.13□□□□□ -1.11
NUP98-213ENST00000524563 LRRFIP2Q9Y608 721 aaKnown RBP8.13□□□□□ -1.11
NUP98-213ENST00000524563 AOX1Q06278 1338 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 MROH5Q6ZUA9 1318 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 MYH8P13535 1937 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 ECM2O94769 699 aaPredicted RBP8.12□□□□□ -1.11
NUP98-213ENST00000524563 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
NUP98-213ENST00000524563 CRKP46108 304 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 GTF2A2P52657 109 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 SP3Q02447 781 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 UBE4AQ14139 1066 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 MAP3K11Q16584 847 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 FTSJ3Q8IY81 847 aaKnown RBP8.12□□□□□ -1.11
NUP98-213ENST00000524563 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
NUP98-213ENST00000524563 KLHDC4Q8TBB5 520 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 PANK1Q8TE04 598 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 TBC1D22AQ8WUA7 517 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 TEKT1Q969V4 418 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 HOOK2Q96ED9 719 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 PRMT6Q96LA8 375 aaPredicted RBP8.12□□□□□ -1.11
NUP98-213ENST00000524563 WRNIP1Q96S55 665 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 TMEM39BQ9GZU3 492 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 ZFYVE28Q9HCC9 887 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 SERPINA10Q9UK55 444 aa8.12□□□□□ -1.11
NUP98-213ENST00000524563 CDK5RAP2Q96SN8 1893 aa8.11□□□□□ -1.11
NUP98-213ENST00000524563 MYO5AQ9Y4I1 1855 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms