RNA–Protein interactions for RNA: ENST00000524510.1

NECTIN1-205, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 5

Gene NECTIN1, Length 832 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-205ENST00000524510 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
NECTIN1-205ENST00000524510 FGFR2P21802 821 aa16.47■□□□□ 0.23
NECTIN1-205ENST00000524510 RFX5P48382 616 aaPredicted RBP16.47■□□□□ 0.23
NECTIN1-205ENST00000524510 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
NECTIN1-205ENST00000524510 PUM3Q15397 648 aaKnown RBP16.47■□□□□ 0.23
NECTIN1-205ENST00000524510 ANKRD13AQ8IZ07 590 aa16.47■□□□□ 0.23
NECTIN1-205ENST00000524510 MRIQ9BWK5 157 aa16.47■□□□□ 0.23
NECTIN1-205ENST00000524510 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
NECTIN1-205ENST00000524510 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
NECTIN1-205ENST00000524510 EYA2O00167 538 aa16.46■□□□□ 0.23
NECTIN1-205ENST00000524510 FKTNO75072 461 aa16.46■□□□□ 0.23
NECTIN1-205ENST00000524510 IFIT1P09914 478 aaKnown RBP16.46■□□□□ 0.23
NECTIN1-205ENST00000524510 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.23
NECTIN1-205ENST00000524510 IFNL1Q8IU54 200 aa16.46■□□□□ 0.23
NECTIN1-205ENST00000524510 TEPSINQ96N21 525 aa16.46■□□□□ 0.23
NECTIN1-205ENST00000524510 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.23
NECTIN1-205ENST00000524510 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
NECTIN1-205ENST00000524510 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
NECTIN1-205ENST00000524510 IGF2BP3O00425 579 aaKnown RBP eCLIP16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 GJA5P36382 358 aa16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 TNNI2P48788 182 aa16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 LPIN2Q92539 896 aa16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 TEKT1Q969V4 418 aa16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 TMEM39BQ9GZU3 492 aa16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 SUGT1Q9Y2Z0 365 aa16.44■□□□□ 0.22
NECTIN1-205ENST00000524510 UBTFL1P0CB47 393 aaPredicted RBP16.43■□□□□ 0.22
NECTIN1-205ENST00000524510 SLC5A1P13866 664 aa16.43■□□□□ 0.22
NECTIN1-205ENST00000524510 SOX10P56693 466 aa16.43■□□□□ 0.22
NECTIN1-205ENST00000524510 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
NECTIN1-205ENST00000524510 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
NECTIN1-205ENST00000524510 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
NECTIN1-205ENST00000524510 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 CCER2I3L3R5 266 aa16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 CIAO1O76071 339 aa16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 MAP3K9P80192 1104 aa16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 APOBEC3HQ6NTF7 200 aaKnown RBP16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 FBXO46Q6PJ61 603 aaPredicted RBP16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 ELP3Q9H9T3 547 aa16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 HDAC5Q9UQL6 1122 aa16.42■□□□□ 0.22
NECTIN1-205ENST00000524510 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 CACNB3P54284 484 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 FKBP1CQ5VVH2 108 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 HHIPL2Q6UWX4 724 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 WDR66Q8TBY9 1149 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 OPTNQ96CV9 577 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 PTPN18Q99952 460 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 MAST3O60307 1309 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
NECTIN1-205ENST00000524510 VGLL4Q14135 290 aa16.4■□□□□ 0.22
NECTIN1-205ENST00000524510 FAM83AQ86UY5 434 aa16.4■□□□□ 0.22
NECTIN1-205ENST00000524510 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.4■□□□□ 0.22
NECTIN1-205ENST00000524510 MS4A4AQ96JQ5 239 aa16.4■□□□□ 0.22
NECTIN1-205ENST00000524510 TMOD2Q9NZR1 351 aa16.4■□□□□ 0.22
NECTIN1-205ENST00000524510 CEP126Q9P2H0 1117 aa16.4■□□□□ 0.22
NECTIN1-205ENST00000524510 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
NECTIN1-205ENST00000524510 CRHR2Q13324 411 aa16.39■□□□□ 0.21
NECTIN1-205ENST00000524510 SIL1Q9H173 461 aa16.39■□□□□ 0.21
NECTIN1-205ENST00000524510 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
NECTIN1-205ENST00000524510 IL15P40933 162 aaPredicted RBP16.38■□□□□ 0.21
NECTIN1-205ENST00000524510 ATP2B3Q16720 1220 aa16.38■□□□□ 0.21
NECTIN1-205ENST00000524510 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
NECTIN1-205ENST00000524510 ARHGAP45Q92619 1136 aa16.38■□□□□ 0.21
NECTIN1-205ENST00000524510 HOOK2Q96ED9 719 aa16.38■□□□□ 0.21
NECTIN1-205ENST00000524510 GNL3LQ9NVN8 582 aaKnown RBP16.38■□□□□ 0.21
NECTIN1-205ENST00000524510 CSADQ9Y600 493 aa16.38■□□□□ 0.21
NECTIN1-205ENST00000524510 GTF2A2P52657 109 aa16.37■□□□□ 0.21
NECTIN1-205ENST00000524510 BRI3BPQ8WY22 251 aa16.37■□□□□ 0.21
NECTIN1-205ENST00000524510 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
NECTIN1-205ENST00000524510 TRIM17Q9Y577 477 aa16.37■□□□□ 0.21
NECTIN1-205ENST00000524510 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
NECTIN1-205ENST00000524510 OTOP1Q7RTM1 612 aa16.36■□□□□ 0.21
NECTIN1-205ENST00000524510 ERO1AQ96HE7 468 aa16.36■□□□□ 0.21
NECTIN1-205ENST00000524510 MEIS3Q99687 375 aa16.36■□□□□ 0.21
NECTIN1-205ENST00000524510 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
NECTIN1-205ENST00000524510 CCL15-CCL14A0A0B4J2E2 113 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 SEMA3EO15041 775 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 ZBTB22O15209 634 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 SP3Q02447 781 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 CCL15Q16663 113 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 FAM151AQ8WW52 585 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 WRNIP1Q96S55 665 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 SNCAIPQ9Y6H5 919 aa16.35■□□□□ 0.21
NECTIN1-205ENST00000524510 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 GNAI3P08754 354 aa16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 PRDX5P30044 214 aa16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 PHKA1P46020 1223 aa16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 DIXDC1Q155Q3 683 aa16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 DCAF15Q66K64 600 aa16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 CDC42EP5Q6NZY7 148 aa16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 ERO1BQ86YB8 467 aa16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 CD99L2Q8TCZ2 262 aa16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 ZKSCAN4Q969J2 545 aaPredicted RBP16.34■□□□□ 0.21
NECTIN1-205ENST00000524510 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms